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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-
<-----------
GT1
<------
--------->
YAB1
<------
<---------
ICU4
-------
<---------
YAB1
--------->
AHL20(2)
<---------
ICU4
<---------
AHL20(2)
--------->
ICU4
--------->
AHL20(2)
<---------
ANAC55(2)
--------->
AHL20(1)
-------->
HAHB4
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
--------------->
AGL15
<---------
AHL20(2)
<---------
TOE2(3)
<---------
DAG2
--------->
AHL20(2)
--------->
YAB1
<---------
YAB1
<---------
AHL20(1)
<---------
AHL20(2)
<---------------
AGL15
--------->
YAB1
-------
--------->
AHL20(2)
<----------
DOF2
--------->
YAB1
--------->
AHL20(2)
--------->
YAB1
--------->
ICU4
----------->
GT1
<---------
ATHB12
<---------
AHL20(2)
-
YAB1
<-----------
GT1
--------->
ANAC55(2)
---------->
DOF2
--------->
WOX13(1)
<---------
AHL20(1)
gtagaaaacaatttttctattttaatgatacttattattactttattttgagaataaaagtgtaaaaaatcataaatcaataacaaaataatttaattta
2803200
<---------
YAB1
--------->
YAB1
<--
--------->
AHL20(2)
<---------
AHL20(2)
<-------
----------
GT1
--------->
AHL20(2)
<-------
---
AHL20(1)
----------->
GT1
<---------
AHL20(2)
--------->
YAB1
<--------
---
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<---------
YAB1
<--------
-->
AHL20(1)
<---------
AHL20(2)
<---------
ANAC58
<---------
AHL20(2)
---------
-->
AHL20(2)
<----------
DOF2
<---------
ANAC58
--------->
AHL20(2)
<---------
AHL20(2)
ttaacaattataaattcttttattttagttggataaacacaaaaattttcttgattttataaaattttaaatatgataactccaaatttatgaagatttt
2803300
--------->
TOE2(3)
<---------
AHL20(2)
<---------
GLK1(2)
--------->
AHL20(2)
--------->
At4g35610
--------->
YAB1
<----------
---------
GT1
<---------
At4g35610
--------->
MYB46(3)
<---------
AHL20(2)
--
CCA1(1)
<---------
AHL20(1)
--------->
YAB1
--------->
ARR11(3)
--------->
AHL20(2)
--
RVE1(1)
<---------
AHL20(2)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
AHL20(2)
<
-
ARR11(3)
--------->
AHL20(2)
<---------
ARR11(3)
<---------
GLK1(2)
--------->
AHL20(2)
-------
-
GLK1(2)
--------->
AHL20(2)
--------->
AHL20(2)
------->
GAMYB
<---------
ATHB12
<---------
AHL20(2)
>
ARR11(3)
--------->
TOE2(3)
<---------
YAB1
<-----------
GT1
--------->
WOX13(1)
--------->
AHL20(2)
ttacaaaacaaaaacattaaattttagcagaattttgataaaatcttaatgaataaccacagatttttcaatcacatataaaattatttaaattacaaac
2803400
--------->
ALFIN1
--------->
ALFIN1
--------->
ARR14(2)
<---------
ARR14(2)
<---------
MYB46(3)
<---------
ANAC46
<---------
ANAC58
<---------
RAP2.6(2)
<---------
ANAC58
<------
NtERF2
--------->
ALFIN1
<-------
PIF5
------->
MYC2
----------->
HVH21
----------->
HVH21
--------->
ANAC46
<-------
MYC2
<---------
O2
------->
MYC3
--------->
O2
<-------
MYC4
--------->
PCF5
<---------
DOF5.7(2)
<-------
MYC3
--------->
ZAT18
<---------
WRKY12
------->
PIF5
<---------
PCF2
--------->
DOF5.7(2)
------->
MYC4
--------->
TCP15(1)
<-----------
HVH21
<---------
PIF3(3)
--------->
bZIP60(2)
--------->
PIF3(3)
<---------
TGA1a
>>>>>>>>>>
HY5
--------->
TCP16(1)
--------->
TGA1a
--------->
ANAC46
--------->
ANAC58
<---------
O2
<---------
TCP23
--------->
O2
--------->
O2
----------->
TCP11(1)
<---------
ALFIN1
<---------
O2
--------->
TGA1a
<-----------
GT1
--------->
ANAC46
===============
MYC_MYB
--------->
YAB1
--------->
ANAC58
<---------
TGA1a
-
GT1
======================================
MYC_MYB
<----
---------
ATHB12
<---------
ALFIN1
<---------
ZAT18
<-------
GAMYB
--------->
SPL7
-->
ANAC46
<---------
GLK1(1)
--------->
ZAT14
<------
NtERF2
----------->
HVH21
caataaacacccctaaacttttgaattccccacgtcaacgtgactgtgcattccacgtggcggatgtgggccctatagttggaccatgactcggacggat
2803500
<---------
DAG2
<----------
DOF2
<---------
ANAC58
>>>>>>>>>
GATA-1
<-------
GAMYB
<---------
MYB52(1)
<-----------
TBP
<---------
ANAC58
<---------
MYB46(3)
---------->
ID1
<-----------
GT1
<---------
ANAC58
<------------
CBF
<---------
ANAC58
<-----------
GT1
--------->
ARR11(3)
--------->
ATHB12
<---------
ANAC46
<---------
AHL20(2)
<---------
GLK1(2)
<-------
TEIL
<------------
CBF
--------->
AHL20(2)
---------->
DOF2
<-----------
GT1
-----
MYB46(3)
------------>
CBF
----------->
GT1
<----------
DOF2
--------->
GLK1(2)
gttgaaattcattgtcgttgccaattgcgtttgtctcactgaaactgtgaaaattttatctcttttatagataaagaatcttgcttttttcagttttcag
2803600
<---------
ARR11(3)
--------->
ARR11(3)
<------
ZmHOX2a(1)
--------->
ALFIN1
<------
ZmHOX2a(1)
<---------
DAG2
--------->
LBD16
<----------
DOF2
<---------
TOE1(1)
<---------
ANAC58
>>>>>>>>>
TBF1
<---------
TOE2(1)
<---------
ANAC58
*
TSS
<-----------
HVH21
<----------
DOF2
---------->
ID1
<---------
YAB1
--
t
atgaagaagaattgaagagagtgtccgaggaaggagacctttggtttcagtttgtgagtcttgttgta
atggctttatcaatggagtttgggttttcaa
2803700
<---------
ZAT2
----------->
RAV1(2)
-------->
P
------>
MYB83
------>
MYB46(1)
------>
MYB83
--------->
AtMYB61
<---------
MYB55(2)
<---------
MYB111(2)
<---------
MYB46(2)
<---------
MYB111(1)
<---------
MYB52(2)
--------->
MYB46(3)
--------->
GLK1(2)
<------
NtERF2
<---------
ARR11(3)
--------->
ANAC58
--------->
ARR11(3)
--------->
ANAC58
==========================
HOX2a_HOX2a
--------->
ANAC46
<------
ZmHOX2a(2)
<---------
GLK1(2)
--------->
ANAC58
--------->
ARR11(3)
----------->
ARR10
<---------
YAB1
------>
MYB46(1)
<---------
ARR11(3)
---------->
DOF2
--------->
WRKY18(1)
<---------
ALFIN1
--------->
ANAC58
---------->
DOF2
------->
MYB59
--------->
ANAC58
--------->
ANAC58
<------
ZmHOX2a(1)
ttgggtcatgcttcaaggcaccaaacccacctgttctaatctctgcaagccctaataagatcaatttcacgttgagaaggagaaagaaaagattcttact
2803800
<-----------
HVH21
<---------
HSFB2a(1)
--------->
ANAC46
--------->
HSFB2a(1)
<---------
TOE2(3)
------>
ZmHOX2a(2)
<---------
ANAC46
--------->
ARR14(2)
<---------
ANAC58
<---------
ARR11(3)
<---------
ANAC58
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ZAT14
--------->
ARR11(3)
---------->
TaMYB80
--------->
At4g35610
<------
ZmHOX2a(1)
<---------
ARR14(2)
<---------
ZAT14
<---------
GLK1(1)
<------
ZmHOX2a(1)
--------->
TOE1(3)
--------->
ZAT2
--------->
ARR14(2)
<---------
LBD16
--------->
TOE2(3)
--
<---------
ZAT2
<------
ZmHOX2a(1)
<----------
DOF2
================
HOX2a_HOX2a
--------->
LBD16
<---------
At4g35610
--------->
At4g35610
---------->
DOF2
------->
TEIL
<-----------
RAV1(2)
tagagtctctgctgtgtcgtataaggaattcgcagagtctgctttagaagaaaccaggaaaaggatcgttcttgaaccttcacatctccag
gtatatgca
2803900
<---------
ANAC46
<---------
ZAT14
--------->
ZAT14
--------->
ZAT18
--------->
MYB52(2)
<---------
YAB1
<---------
ANAC58
------>
MYB83
<---------
MYB52(1)
--------->
AHL20(1)
------>
MYB46(1)
--------->
TOE2(3)
<---------
AHL20(2)
<---------
MYB59
<---------
ANAC58
<---------
AHL20(1)
--------->
ATHB12
<------
ZmHOX2a(1)
<---------
ANAC58
<------
ZmHOX2a(1)
<---------
ANAC58
----------->
GT1
--------->
ICU4
------->
AHL20(2)
<---------
ZAT6
<---------
YAB1
--------->
At5g28300
<---------
YAB1
<--
attacatttcgttagtgtagtgggaggattatatttctcattgtttcttgctgtgaattttgggtaaattgatttgagttgtcattaggaaccaaacaaa
2804000
<-----------
RAV1(2)
<---------
LBD16
--------->
ANAC58
<---------
ARR14(2)
<---------
ANAC55(2)
----------->
HVH21
<---------
YAB1
<---------
GLK1(2)
--------->
ANAC46
--------->
DAG2
<---------
ZAT6
---------->
DOF2
--------->
ANAC58
---------->
DOF2
<---------
ZAT14
<---------------
AGL15
--------->
YAB1
<------
ZmHOX2a(1)
<----------
DOF2
--------------->
AGL15
<---------
ATHB12
--------->
LBD16
<---------
AtLEC2
---------
GT1
<---------
ANAC46
--------->
ARR11(3)
--------->
ANAC55(2)
--------->
ZAT14
<------
ZmHOX2a(1)
taactttactgttatagactgcttatataagtaaaagttcagattttgtttttctaatcacgaaactgtttcaggaaaag
tatagtagcatgacaggact
2804100
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AGI:
At3g09150.1
Description:
HY2 (ELONGATED HYPOCOTYL 2); phytochromobilin:ferredoxin oxidoreductase. Identical to Phytochromobilin:ferredoxin oxidoreductase, chloroplast precursor (HY2) [Arabidopsis Thaliana] (GB:Q9SR43;GB:Q8L8Q6;GB:Q9SS72); similar to unnamed protein product [Vitis vinifera] (GB:CAO16826.1); contains InterPro domain Ferredoxin-dependent bilin reductase; (InterPro:IPR009249)
Range:
from: 2803602
to: 2805593
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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