Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------ARR14(2)                                                                            --------->ARR14(2)                                                                            --------->ARR11(3)                                                                            <---------ARR11(3)                                                                           <---------GLK1(1)                                                                           --------->GLK1(1)                                                                           <---------KAN4(1)                                                                           --------->KAN4(1)                                                                          ---------->TaMYB80                                                                          --------->ARR14(2)                                                                          <---------KAN4(2)                                                                          <---------ARR14(2)                                                                     ------>MYB83                                                                     ------>MYB46(1)                                                                    --------->ORA47(1)                                                                    --------->MYB55(1)         --------->GLK1(2)                                         <---------MYB55(2)        <---------ARR11(3)                                         --------->DEAR3(1)        <---------GLK1(2)                                          --------->MYB46(3)        --------->ARR11(3)                                         --------->DEAR4(1)      ----------->ARR10                                           --------->DEAR3(2)    ---------->DOF2                                          --------->ANAC46              --------->KAN4(2) ------->ANAC58                       --------->At4g35610    --------->ANAC58           <---------ARR11(3) ------->ANAC58                      ----------->RAV1(1)     --------->ANAC58       <---------At4g35610 --->ANAC58                         <---------WRKY38(1)      --------->bZIP60(2)------>ZmHOX2a(1) --->ANAC46              ---------->DOF2------->GAMYB<---------TOE2(3) <---------MYB59  --------->ARR11(3) --->ANAC58 <----------DOF2    ---------->DOF2 <---------TOE2(3) ------>NtERF2  <----------DOF2 <----   caagcgaaaagattctttttcaattaccaaagctaaagtcaacagaattgagattaagaaaacacgacaccgaccgaatatcctttagatgatcatcccc  2650800                                                                                    --------->ARR11(3)                                                                      <---------ARR14(2)                                                        --------->ANAC58     --------->ZAT6                        <---------GLK1(1)               --------->ANAC58 <---------MYB52(2)      ----                        --------->GLK1(1)     <---------O2            --------->ARR14(2)     <-------                  --------->TOE2(3)       <------ZmHOX2a(1)          <------ZmHOX2a(1)      --------- -----ALFIN1 ---------->DOF2             --------->ANAC46     --------->TOE1(2)     <---------ARR11(3)   tcccaaataaaaccccaaagccttagaattccaaaatttcaccaggacacgaggtcgaaagaaaccctcgaggaaacgaactctaatatctgtaattaag  2650900                                                                                                 <---                         <---------ATERF1(1)                                                     <---                      --------->ZAT2                              <---------ZAT6                 <---                      --------->At4g35610                         ----------->GT1           ---------                      ----------->RAV1(2)                    --------->CCA1(2)              <--------                    --------->DAG2                          --------->ARR11(3)         --------->HSFB2a(2)                   ---------->DOF2    --------->ANAC58      <---------ARR11(3)         <---------HSFB2a(2)        --------->AHL20(1)            --------->ANAC46      <---------ARR14(2)      ------->TEIL <---        <---------ARR11(3)            --------->ANAC58      --------->ARR14(2) ----------->RAV1(2) ----->ARR11(3)<----------ID1     --------->ZAT6          --------->LBD16      <---------ANAC46  <--- --ICU4 <---------AHL20(1) <---------ANAC46           --------->ARR14(2)       <---------bZIP60(2) >ICU4  --------->AHL20(2)<------NtERF2               <---------ARR14(2)    ----------->HVH21    ----   acctagtctatatattagggaaaaagctggcgcataacacaagcaattttcaaacaaatccagatatagagtaaaactatgacctggacctagaaggttt  2651000           --------->AHL20(1)          <---------AHL20(2)          --------->AHL20(2)    ----------->GT1  <---------ANAC58  <---------ANAC58  ----------->GT1  <---------bZIP60(2) --------->LBD16                                                             <--  <---------ANAC46    ----------->GT1                                                           <---- ------ANAC55(2)     <---------HSFB2a(2)                                                     -------- ------ANAC58  <---------AHL20(2)                                                            <------- ------ANAC58  --------->AHL20(2)                                                            -------- >HSFB2a(1)--------->AHL20(2)      <-----------ARR10                                         -------- -HSFB2a(1)<---------AHL20(2) ---------->DOF2                                                <------- ------ANAC46 <---------AHL20(2)   --------->GLK1(2)                                 --------->MYB52(1) ------ANAC55(1)     --------->HSFB2a(2)                    ---------->DOF2         <-----------GT1 ----->ANAC55(2) <---------CCA1(2)<---------GLK1(2)   ---------->DOF2           <------ZmHOX2a(1) <--   cgtgtcgtgtaaataatttatatccagaaaaaaaaagaatctaaactctgcgagagaaaagtcaaagagagacagagagagaggaattaccagagaatat  2651100                                                                                                  ---                                                                           ----------->GT1 <-------MYC2                                                                          --------->DAG2   <-------PIF5                                                                        ============================bZIP_DOF                                                                     <----------ID1        ------->PIF5                                                                  *TSS  ---------->DOF2    ------->MYC2                                                                  ==================================bZIP_DOF                                                                  ---------->DOF2          ------->MYC3        <------ZmHOX2a(1)                                     <---------------AGL15        <-------MYC3    <------ZmHOX2a(1)                                        ----------------->AGL1       <---------ANAC58  <---------TOE2(3)                                          ----------------->AGL2       <---------TGA1a -------ANAC58                  <---------------AGL15        <-----------------AGL2       <------NtERF2 -----YAB1                      --------->TOE1(3)            <-----------------AGL1       <---------ANAC58 -->TaMYB80                     --------->TOE2(3)            <-----------------AG         <---------ANAC46 --KAN4(2)                      ==============================================MADS_MADS   --------->ALFIN1 ->ARR14(2)                     <----------DOF2              ----------------->AGL3      ------>NtERF2 ->GLK1(2)             <---------O2            ----------->GT1--------------->AGL15     <---------ANAC58 --ARR14(2)            --------->O2      ---------->DOF2     ----------------->AG       <---------ANAC58 -------ANAC58     <------ZmHOX2a(1)    <------ZmHOX2a(1)    <-----------------AGL3     <---------ANAC46   gcttgaggaaggagacgagaaggagacgagacaactttaacaggaaagagggtaatgtgccaaaccaaaaaaggaaaaggttttaagaaggcgcgtggct  2651200                                             ------->MYC2                                             <-------MYC3                                             <-------MYC2                                            --------->ANAC55(2)                                            <---------ANAC55(2)                                            <---------TGA1a                                            ==============================================bZIP_DOF                                            <--------ABF1                                            --------->TGA1a                                  <---------ANAC46                                  <---------ANAC58<---------ANAC58                             --------->ATHB12<-------MYC4                                         <--                            <------ZmHOX2a(2)------->MYC4                                         ---                            ===================HOX2a_HOX2a                                      <----                           --------->ARR11(3)------->MYC3                                      ------                      <---------ANAC46      <---------O2                                       <-----                  <---------HSFB2a(1)       --------->O2              ------>MYB46(1)          <-----                  <---------HSFC1(2)       ------------>OsbHLH66      ------>MYB83           <-------                  --------->HSFC1(2)--------->ALFIN1                <---------MYB59         <--------                  --------->HSFB2a(1)   <------ZmHOX2a(1) <------------CBF     <----------DOF2------- ------>REM1(1)--------->LBD16    <---------ANAC58<---------ANAC58 --------------->AtSPL3 --------->ZAT18   acattttttatgtcttccgaagcatcgtggatcatggggtgaggacacgtgttcgtgttctattgggaaaccgaacttcttctttgttttagtgggccgg  2651300    ---------->DOF2  <----------DOF2 -------GLK1(1) ------>GLK1(1) --NtERF2 --->LBD16 -NtERF2                                                                <----------DOF2 ----RAP2.6(3)                                <------MYB46(1)       --------->YAB1 --LBD16                             --------->ZAT6                <---------YAB1     <-------MYC3 -PCF2                      <-------TEIL      <------MYB83 <---------ALFIN1      <-----------GT1 -->RAP2.6(2)         --------->ANAC46       --------->MYB59    <---------MYB52(1)    ------->MYC3 <-   aattctttaagcccattacattacaagacgttcagacggacactagttcggtccaaaggcatcaccgttatcatcttttatatttacacgttttcaacgt  2651400                                          <----------DOF2                                     --------->At4g35610                                     <---------ZAT2                                  --------->AHL20(2)                            ---------->DOF2                                          <---------AHL20(2)                           <---------WRKY12                                         <---------YAB1                           <---------WRKY38(1)                                    --------->YAB1                        <----------ID1  --------->At4g35610   --------->YAB1      --------->AHL20(2)                     ---------->DOF2--------->MYB52(2) --------->WOX13(1)        <---------ATHB51       <-----------GT1 --------->DAG2<---------At4g35610 <---------ATHB12      --------->WOX13(1) ---------DOF2   <---------PCF2 <---------ZAT6      --------->TOE2(3)    --------->AHL20(2)   tcttttatattacatcgtgggtcaaaaggtcaaagtgttagctgctctacttaatctcaatcaataacaatctcataaaatcaattataaattaagcgtc  2651500                                                 ---------->DOF2                                                ------->GAMYB                                               --------->MYB46(3)                                              --------->ANAC58                                             ------->GAMYB                                            <---------MYB55(2)                             <-----------HVH21--------->ANAC58                   <---------TOE2(3)        <---------MYB111(2)                                   ---               <----------DOF2 <-----------RAV1(2)                     --------->AHL20(2)         ---               --------->TOE2(3)            --------->MYB46(3)       --------->AHL20(2)---------->DOF2    --------->MYB46(3) <-------TEIL ----------->GT1        <------ZmHOX2a(1)----------->GT1       <--   ttggtaaccaaagttttctttaatgttcatgtgtcagaaggaaacaacaaccaaagaagtaggaactacataaaaatatagtaaatctacaaagtagttg  2651600                              <---------ANAC58                              ============================bZIP_DOF                              <---------ANAC46                              ================================MYC_MYB                              <---------ANAC58                              <---------ANAC55(2)                              <---------TGA1a                              --------->TGA1a                              --------->TGA2(1)                              <---------TGA2(1)                              <---------bZIP60(1)                              --------->bZIP60(1)                              <---------O2                                     <---------At4g35610                              --------->ANAC55(2)                              --------->At4g35610                            <---------TGA2(2)                     ------>ZmHOX2a(2)        --------->GLK1(2)                           ----------->HVH21                     <------ZmHOX2a(2)         <---------ARR14(2)                     --------->ATERF1(1)               <------MYB46(1)--------->ZAT2       --------->ARR14(2)     <---------REM1(1)     ----------->TGA1            <------MYB83   <---------ZAT2   <------NtERF2 ------>ZAT14        <------ZmHOX2a(1)               <--------P <---------ARR14(2)    --------->LBD16 ------>ZAT18      --------->ALFIN1            ---------->DOF2  --------->ARR14(2)   --------->DEAR3(1) -------ZAT14     <------ZmHOX2a(1)        ----------->GT1     <------ZmHOX2a(1)    <---------LBD16   tggactggtgaaggaatgaaggaggaggcctgacgtaagtgaaattggtaaaagggttggccttaggatccgaactgggactgctcgccggagaatccaa  2651700  Previous    Next  AGI:  At3g08720.1    Description:  ATPK19 (ARABIDOPSIS THALIANA PROTEIN KINASE 19); kinase. Identical to Serine/threonine-protein kinase AtPK19 (ATPK19) [Arabidopsis Thaliana] (GB:Q39030;GB:Q949X5;GB:Q9C5R1); similar to ATPK1 (P70 RIBOSOMAL S6 KINASE), kinase/ protein binding [Arabidopsis thaliana] (TAIR:AT3G08730.1); similar to putative pp70 ribosomal protein S6 kinase [Avena sativa] (GB:CAA56313.1); similar to Os03g0334000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050027.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase, C-t Range:  from: 2648515    to: 2651166    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g08730.1    Description:  ATPK1 (P70 RIBOSOMAL S6 KINASE); kinase/ protein binding. Identical to Serine/threonine-protein kinase AtPK1/AtPK6 (ATPK1) [Arabidopsis Thaliana] (GB:P42818); similar to ATPK19 (ARABIDOPSIS THALIANA PROTEIN KINASE 19), kinase [Arabidopsis thaliana] (TAIR:AT3G08720.1); similar to ATPK19 (ARABIDOPSIS THALIANA PROTEIN KINASE 19), kinase [Arabidopsis thaliana] (TAIR:AT3G08720.2); similar to putative pp70 ribosomal protein S6 kinase [Avena sativa] (GB:CAA56313.1); similar to Os03g0334000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050027.1); similar to ribosomal protein S6 kinase [Zea mays] (GB:NP_001105237.1); contains InterPro domain Ser Range:  from: 2651453    to: 2654218    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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