Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <XXXXXXXXXXXXXXXXXXXXMIR844                                                                   ----------->GT1                                                                --------->DOF5.7(1)                                                               --------->DAG2                                                               --------->DOF5.7(1)                                                           --------->AHL20(2)                                                        <---------WOX13(2)                                                        --------->WOX13(2)                                                      --------->AHL25(1)                                                      --------->AHL20(3)                                                      --------->AHL25(3)       --------->ARR11(3)         <---------At4g35610                          <---------AHL25(3)       <---------GATA12      --------->At4g35610                             <---------AHL12(3)       <---------ARR11(3)      <---------ZAT2  --------->DOF5.7(1)             <---------AHL25(1)     --------->AHL12(1)      <---------At4g35610                             --------->AHL20(2)   --------->AHL12(2) <---------ZAT14     --------->AHL20(2)               --------->AHL12(3)  --------->YAB1 ------->ZAT14       --------->AHL25(2)               <---------AHL20(2) <---------YAB1 ------------AtSPL8  <---------AHL25(2)   <---------ARR11(3)  ---------->DOF2<---------AHL12(1) ---->DOF5.7(1)      <---------AHL25(1)   --------->ARR11(3)  --------->DOF5.7(1)--------->TOE2(3) --->DOF2--------->At4g35610             <---------GLK1(1) <---------AHL25(3)<---------AHL20(2) -->DOF5.7(1)        <---------AHL12(3) <---------RVE1(2) --------->AHL20(2) <---------AHL25(3) <----   gagtactcggctgctacaaaaaaaaaaatgaagtagttgtttgatatctcttgaatttaaataaaaaaggagtttataataaatcttagcaaagttttct  2519000                                                                                            <--------                                                                                            <--------                                                                                           --------->AHL25(2)                                                                                           --------->AHL20(1)                                                                                           --------->AHL25(3)                                                                                           <---------AHL25(3)                                                                                           <---------AHL12(1)                                                                                           --------->AHL12(1)                                                                                           <---------AHL25(2)                                                                                           <---------AHL25(1)              <---------YAB1                                                               --------->AHL20(2)             <---------AHL20(3)                                                            <---------AHL20(2)             --------->AHL25(2)                                                            <---------AHL12(3)             <---------AHL20(1)                                                            --------->AHL25(1)             <---------AHL25(2)                                                           <---------AHL12(3)             --------->AHL20(2)                                                           --------->AHL20(2)             --------->AHL20(3)                                                           --------->AHL12(3)             <---------AHL20(2)                                                           --------->AHL25(1)            --------->YAB1                                                                --------->AHL25(2)           <---------YAB1 --------->ANAC55(2)                                             --------->AHL25(3)          --------->AHL20(2)               <-----------GT1                                <---------AHL25(2)          --------->AHL20(3)          --------->TOE2(3)                      --------->ANAC58       <          <---------AHL20(3)          --------->TOE1(3)                      --------->ANAC58      <-          <---------AHL25(2)   <---------HSFB2a(2)                           --------->ANAC46   <----   <----------DOF2    <-----------HVH21--------->DOF5.7(2)    <---------YAB5<---------REM1(2)  <----- -----YAB1--------->AHL25(2)--------->ARR14(2)       <---------ALFIN1    ------>ZmHOX2a(1)<---------AHL25(1)   gatacctttcaatattataattgtggtcacgttctgcaaacgttatcacctttgaacacctctaatcttcttctcctctacgcagtcaaaaaaaaaatta  2519100                          --------->LBD16                         <---------HSFB2a(2)                         <---------HSFC1(1)                         --------->HSFB2a(2)                         --------->HSFC1(1)                   <---------CCA1(1)                   <---------RVE1(1)    ----------->GT1--------->KAN1 -ICU4        --------->DOF5.7(1)                                       <-----------GT1 -AHL12(2)  --------->DOF5.7(1)                                    --------->ATHB12 ---------GLK1(2) <---------ARR11(3)                              <---------YAB1 --------At4g35610--------->ARR11(3)                              <---------YAB5                  <-- -----At5g28300   <---------RVE1(2)                        <----------DOF2      <---------ANAC46 ---- ------GT1  ---------->DOF2       ---------->DOF2    --------->ATHB12<---------GLK1(1)      ---------   cagcttctgttaaaaaaagagatatttccagaaactaaaagaagctaagaacagatgatttcttttttatgatttctctatctcgtgaacaaatggcact  2519200                                                                      <---------ICU4                                                                      --------->YAB1                                                                     <---------YAB1                                                                     <---------YAB5                                                                     --------->ICU4                                                                    <---------AHL20(3)                                                                    --------->AHL12(2)                                                                    <---------AHL12(2)                                                                    --------->AHL25(2)                                                                    --------->AHL20(3)                                                                    <---------AHL12(3)                                                                   <---------AHL25(3)                                                                   <---------ICU4                                                                   --------->YAB5                                                                   --------->YAB1                                                                  --------->AHL25(2)                                                                  <---------AHL25(1)                                                                  --------->AHL25(1)                                                                  <---------AHL25(3)                                                                  <---------AHL12(1)                                                                  --------->AHL12(1)                                <---------AHL25(3)                <---------AHL12(3)                               --------->AHL20(2)                 --------->AHL25(3)                               <---------AHL20(2)                 --------->AHL12(3)                               --------->AHL20(3)                 --------->ICU4                               <---------AHL12(3)                 <---------ATHB51                               --------->AHL12(3)                 <---------AHL20(2)              ---                               <---------AHL20(3)                --------->AHL12(2)              ----                               --------->AHL25(1)                --------->AHL25(3)         <--------                               --------->AHL12(1)                <---------AHL12(2)         ---------                               <---------AHL12(1)                --------->AHL20(3)        --------->AHL25(1)                               --------->AHL25(3)                <---------AHL25(2)        --------->AHL25(2)                               <---------AHL25(1)          ----------->GT1                 <---------AHL25(2)                             <---------WOX13(2)           --------->DOF5.7(1)              <---------AHL12(1)         ----------->GT1 <----------DOF2                  --------->DAG2                   --------->AHL12(1)        --------->DOF5.7(1)  --------->WOX13(2)          --------->DOF5.7(1)               <---------AHL25(1)       --------->DOF5.7(1) --------->AHL20(2) ---------->DOF2    --------->AHL25(2)        --------->AHL20(2)      ---------->DOF2    --------->TOE2(3)   <------ZmHOX2a(1)   <---------AHL20(3)  ----------->GT1 -------TOE2(3) --------->AHL20(2)  ----------->GT1      ---------->DOF2<---------YAB1     --------->AHL20(3) ------>DOF2  <---------WOX13(2)<---------AHL20(2) ---------->DOF2--------->AHL20(2) --------->AtLEC2 >ZAT18--------->DAG2    --------->TOE1(3) <---------TOE2(3)----------->GT1   ---------->DOF2    <---   aaagttggaaaaggagaattaaaacaactttaaataaatagaaataaggaaagaaaagaaaaaggaaaataattataactgaaagaaatgcaaaaaattc  2519300                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                              <------                                                                                        <---------WOX13(1)                         <---------KAN1                                                <---------RVE1(2)                         <---------CCA1(2)                                             >>>>>>>>>ARR2                       --------->ANAC46                                                <------------CBF                      --------->LBD16              --------->YAB1                     --------->ATHB12                 <---------GLK1(1)                 <---------ICU4                 --------->GLK1(2)  <------ZmHOX2a(1)   ------>NtERF2               <---------ATHB51               <---------RVE1(2) ------>LBD16   --------->GATA12                  --------->ICU4                 *TSS<---------YAB1 ----->HSFB2a(2)<---------GATA12      <XXXXXXXXXXXXXXXXXXXXMIR413                <---------ARR11(3) -AHL12(1)     <---------GLK1(2)  <---------MYB46(3) <---------YAB1              --------->ARR11(3) >KAN1<-------GAMYB <---------LBD16 <---------HSFB2a(2)                 <------ZmHOX2a(1)<---------MYB46(3) ------HSFB2a(2)------->TEIL    <-------GAMYB----------->GT1     <---------KAN1  <---------GLK1(2)   cagaggagcgttgaattgaatctccgcgtctctcggttgtcgaagaagagaaattatgagagttggaatttggaggagatagagattttgattgttgagg  2519400                                                                                   <---------TOE2(3)                                                                                   <---------WOX13(2)                                                                                   --------->WOX13(2)                                                                                <---------AHL20(3)                                                                                <---------YAB1                                                                                <---------AHL20(2)                                         <------------CBF             --------->AHL12(2)                                       <------MYB46(1)            <-------GAMYB--------->YAB1                                       <------MYB83        <---------YAB1      --------->TOE2(3)                              --------->At4g35610         <---------AHL20(3) --------->AHL25(2)                              <---------ZAT2              <---------AHL12(3) <---------AHL20(3)          --------->KAN1      <---------At4g35610         <---------AHL20(2) <---------AHL20(2)      ----------->GT1         --------->ZAT2             <---------ICU4      --------->AHL20(3) ------ARR14(2)              <---------AGP1            --------->AHL12(2)    <---------AHL25(2) <---- ------ARR11(2)          <---------RVE1(2)           --------->AHL20(2)     --------->YAB1    <------ ----->ARR14(2)     --------->TOE2(3)<--------P      <---------AHL20(2)    <---------YAB1   --------- --ZmHOX2a(1)       <----------DOF2 <-------GAMYB    --------->AHL25(3) <---------AHL20(2)<---------GLK1(2) ---TOE2(3)   --------->TOE1(3) --------->ALFIN1  <----------DOF2----------->GT1<---------AHL12(3)   aaatgggagagtttatccctaactttagatagagctggggttggattgagagcttttaatttttatggggttattttataatattaatgaaagattgtga  2519500                                                             <---------TOE1(2)                                                   --------->ICU4                                                   <---------YAB1            --------->YAB5                                                 --------->ATHB12            <---------ICU4                                                 --------->YAB5              --------->ATHB12                                      --------->ANAC58      <-----------RAV1(2)                                      <---------ANAC55(2) <---------ANAC46   --------->YAB1                                      --------->ANAC58 ----------->HVH21     -------->ATHB1     ----------->GT1        <---------RVE1(2)    --------->KAN1             <---------ATHB12   <----- -----RVE1(2)          <---------ANAC46         <---------YAB5        <----------DOF2     <------NtERF2 ---YAB1       <-----------GT1     <---------RVE1(2)   ----------->TGA1     <---------YAB5--------->At4g35610 -->GT1   <---------YAB1    <---------YAB5--------->DOF5.7(1)<---------TOE2(2)    <---------YAB1   <-   ttttgaaacgttactatttacaactacgtagagattggataagtaagagagtcattagtgacgcaggtttaactttgaatcattgttatggcagcaagat  2519600                          --------->YAB5                       <---------WOX13(2)                   --------->TOE1(3)                       <---------WOX13(1)          ------>ZmHOX2a(1)     --------->YAB1            <---------RVE1(2)      <-----------GT1  --------->WOX13(2)                --------->ATHB12   <---------KAN1  --------->TOE2(3)                    --------->ICU4  ------->TEIL    ----------->GT1                       <---------YAB1         <------ZmHOX2a(1) ----GLK1(2)  <---------DAG2<---------YAB1              <---------YAB5        <----------ID1 --------YAB1 <----------DOF2  <---------YAB1<----------DOF2       <-----------HVH21   ----------->GT1   tatgaatttctccttacttttcgttaaatgactattatagccctgaactttgtttgtattgattggctctgtcatttctaaggacaaatgtgtaatttca  2519700                                                                                            ---------                                                                                          <----------                                                                                        <---------YAB1                                                                                       <---------AHL12(2)                                                                                      --------->AHL12(1)                                                                                      <---------AHL20(2)                                                                                      --------->YAB1                                                                                      -------->ATHB1                                                                                      <---------AHL25(3)                                                                                      <---------AHL12(1)                                                                                      <--------HAHB4                                                                                      --------->ATHB51                                                                                      <---------ICU4                                                                                     <---------ATHB51                                                                                     <---------YAB1                                                                                     <---------YAB5                                                                                     --------->ICU4                                                                                     --------->AHL25(3)                                                                                    <---------AHL25(2)                                                                                    --------->AHL12(2)                                                                                    <---------AHL12(2)                                                                                    <---------AHL12(3)                                                                                    --------->AHL12(3)                                                                                    --------->AHL25(2)                                                                                   --------->YAB1                                                                                   <---------ICU4                                                                                   --------->YAB5                                                                                   <---------AHL25(3)                                                                                  <---------ATHB51                                                                                  --------->AHL12(1)                                                                                  --------->AHL25(3)                                                                                  <---------AHL25(1)                                                                                  --------->AHL25(1)                                                                                  <---------AHL12(3)                                                                                  <---------AHL20(2)                                                                                  --------->AHL12(3)                                                                                  --------->AHL25(2)                                                                                  <---------AHL25(3)                                                                                  --------->ICU4                                                                                  <---------AHL12(1)                                                                                  --------->AHL20(2)                                                                                 <---------AHL20(1)                                                                                 --------->AHL25(3)                                             <---------AHL20(2)                  <---------AHL20(3)                                            <---------AHL25(1)                   <---------AHL25(2)                                            --------->AHL25(3)                   --------->AHL12(3) -                --------->ANAC58            --------->AHL20(2)                   --------->AHL25(2) <                --------->ANAC58            <---------AHL12(3)                   --------->AHL12(2) -               --------->DAG2               <---------AHL20(2)                   --------->AHL20(3) -              ---------->DOF2               --------->AHL12(3)                  --------->AHL12(2)  -           <---------WOX13(2)       --------->RVE1(2)   --------->CCA1(2)  ----------->GT1<<<<<<<<<<<           --------->WOX13(2)   <-------TEIL--------->AHL25(1)        --------->CCA1(2)--------->AHL12(2)       ----------->GT1  <---------ANAC58 --------->GATA12          --------->DOF5.7(1)-------->HAHB4-      ----------->GT1   <---------ANAC58 <---------GATA12        ---------->DOF2--------->YAB1    ---   taaacgatgtgttaaataaagcaatttcttgatgttcatatcagatttaaattgcaagatagagagagaaagagacgatgtaaaataattattaacactg  2519800            <---------AHL20(2)      <---------AHL12(2)     --------->AHL12(3)     <---------AHL20(2)     --------->AHL20(3)     <---------AHL25(2)     --------->AHL20(2)     <---------AHL20(1)     <---------AHL25(3)     --------->AHL25(2)     <---------AHL20(3)     <---------AHL25(1)     --------->AHL25(1)    <---------AHL20(2)    --------->AHL20(2)    --------->AHL25(3)  --------->WOX13(2)  <---------WOX13(2) >ZAT6--------->AHL12(2)                         --------->At4g35610 -GT1--------->AHL25(3)                         --------->ALFIN1 -------->AHL20(2)                             <-------MYC3 ---------AHL12(1)                             ------->MYC2                                       --- -------->AHL25(1)                             <-------MYC2                                     ----- -------->AHL25(3)                             ------->MYC3                                  -------- -------->AHL12(1)                        <---------AHL20(2)             --------->RVE1(2)   -------- <<<<<<LFY --------->AHL20(2)           <---------WOX13(2)          <---------KAN1 <---------RVE1(2) -------->ICU4                      ----------->GT1     ----------->HVH21------->TEIL  <-------TEIL ------>GATA12      --------->KAN1  <---------DEAR3(2)<---------TGA1a   <---------CCA1(2)   <--------   gatttattaaattttaaatttcaaattccacaattcgtcggtaataaaacgtgctgaagtgacatatagcatatgtatctaatgtgatgttcatatgata  2519900  Previous    Next  AGI:  At3g07890.1    Description:  RabGAP/TBC domain-containing protein. similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT2G39280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23986.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) Range:  from: 2516310    to: 2519381    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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