Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------ANAC58                                                          <---------ANAC58                                                <----------DOF2                                             <---------ARR11(3)                                           <---------AHL20(2) <---------GLK1(2)        <---------AHL20(2)              --------->YAB1   --------->STY1(2)   <---------YAB1          <---------AHL20(2)--------->ARR11(3)                         --------->YAB1 --------->ID1        --------->YAB1   <---------YAB1    <---------STY1(2)      <---------TOE2(3) -->ARR11(3)   <---------ANAC46      --------->YAB1 <---------YAB1   <----------DOF2  <---------TOE2(3)   ttgttcttattttttttgtgtgaatcaaaataatcggcttcataataaatctttattcttgctagcttcttctttaagagtcgaggttaatgaaaacaac  2378800                                                             --------->AHL20(1)                                                            <---------ICU4                                                    ---------->DOF2                                                 ----------->RAV1(1)                                                --------->MYB46(3)                        <---------ANAC46       ------>MYB46(1)                   <----------ID1                      <-----------HVH21        ------>MYB83--------->ICU4---------->DOF2                   <---------ANAC58           --------->ANAC46   <---------YAB1  ----------->GT1                   <---------ANAC58    <-----------GT1----------->GT1  <---------ZAT6 --------->AHL20(2)                   <---------ANAC46   --------->AHL20(2)--------->AHL20(2)     ---------->DOF2 <-----   tagttttgagtttttttttttgtgtgtcatggattactaatttactaccaacaacaaagtaaatattatgctagtgaaagaaaaagaaaaaaatgatgca  2378900                                             <---------AHL20(2)                                       ------>MYB46(1)                                       ------>MYB83                                     <---------MYB59                   --------->YAB1 <-----------GT1      <---------AHL20(2)          >>>>>>>>>>WRKY26   --------->TOE2(3)              >>>>>>>>>>WRKY38            --------->YAB1 ----AtLEC2  <-----------GT1      >>>>>>>>>>WRKY43         --------->YAB1    <---------ANAC46   tgaattcttaaattttgacaatattaaacatgaaattgaccaaatatttcatttttctcaaaaataagaattttagtttgtgtatatatagaatttagtt  2379000                                                                                                <----            <----------ID1                   <---------YAB1                                   <------     <---------ANAC46                      <-----------GT1                                   --------     <---------ANAC55(2)            <---------AHL20(2)                                      ---------     <---------YAB1          --------->GLK1(2)                                              <--------   --------->YAB1            <---------ARR11(3)                                   ---------->DOF2  --------->ICU4             --------->ARR11(3)                      <---------ZAT6       <----------  <---------ATHB51    ----------->GT1 ---------->DOF2         --------->AHL20(2)<---------AHL20(2)  <   aacaattatgtataacaacaaaaatgctaaaaatctatataaaagttactattagtttaaaaaaaaaaatagtattagttatttaaaagttattacttat  2379100                                                                        <--------ATHB1                                                                        <---------AHL20(2)                                                                        --------->AHL20(2)                                                                        --------->YAB1                                                                       --------->ICU4                            <---------AHL20(2)          ---------->DOF2<---------YAB1                        --------->ATHB12              <---------YAB1 --------->YAB1                       <---------YAB1              <---------YAB1  --------->AHL20(2)    <---------AHL20(2) <---------ATHB12            <---------------AGL15<---------ICU4 -----YAB1            <---------TOE2(3)         --------->ICU4--------->ANAC58                  <---- ---ICU4             --------->YAB1          <---------YAB1<----------ID1            --------->CCA1(2) ->ICU4             --------->ICU4         --------->CCA1(2)  ----------->GT1       <---------ARR14(2) >ANAC55(2)        <---------YAB1         --------->ARR11(3)  --------->ANAC58      <---------GLK1(2) -ANAC55(2)      <---------ZAT6   <------ZmHOX2a(1)--------------->AGL15<---------AHL20(1)  <-------- -GT1   <-----------GT1--------->ICU4     <---------ARR11(3)<------ZmHOX2a(1)       --------->ARR14(2) ---------ZAT6 ----------->GT1---------->DOF2<---------AHL20(2)   --------->YAB1  ----------->ARR10*TSS   tagtgtttatttacaaatagtattaatgatttaaaaggatgaaagatataattcttattaaaggacgaaaataataattttggacagatttgggttttat  2379200                                                                    <---------At4g35610                                                            <------NtERF2                                                           <------NtERF2                                                           ------>NtERF2                                                           <---------RAP2.6(3)                                                          --------->ANAC58                                                          --------->ANAC58                                                          <---------ATERF1(2)                                                 ------->GAMYB      --------->At4g35610                                              --------->MYB52(1) ---------->DOF2                                          <------NtERF2   --------->DEAR3(1)                     <-----------TGA1    --------->LBD16  --------->ATERF1(2)           ------>ZmHOX2a(1)  ---------->DOF2   --------->YAB1     <---------LBD16    --------->RAP2.6(2)      <----------DOF2 -----CCA1(2)     ------>MYB46(1)    ------->GAMYB        --------->ANAC46       --------->At4g35610 ---TBP           ------>MYB83      <-----------RAV1(2)  <---------RAP2.6(2)     <---------At4g35610   atctgaaagactcaaaaacctatcgtcatttatcttcaacaggcggaataacggagatggccgccattacagctctcactctccgctctcctgtttatct  2379300                                                    --------->ZAT2                                               --------->AtMYB61                                            --------->AtMYB61                                            ------->GAMYB                                           --------->MYB46(3)                                           <---------MYB55(2)                                          -------->P<---------ZAT2                                         --------->WOX13(1)             --------->ANAC46          --------->MYB46(3)             --------->ANAC58          <---------ATHB12             --------->ANAC58         ------>MYB46(1)           <---------ALFIN1           ------>MYB83--------->MYB46(3)    ----------->RAV1(2)              --------->WOX13(1)  <---------CCA1(2)    --------->At4g35610          --------->REM1(1)<---------ALFIN1       <-----------GT1    <---------At4g35610       <---------ANAC58 <---------ALFIN1      ------>ZmHOX2a(1) <---------ATHB12             <---------ANAC58--------->MYB46(3)<----------DOF2              --------   cccatcatctgccacaagccctagattccatggcttcaccaatcaaccaccaccagctcgtctcttctttcctcttaaccccttcccttctctatcaatc  2379400                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                  ---                                <----------DOF2                                                   <--                              --------->At4g35610                                                 ---                          --------->ARR14(2)                                                      <--                          <---------ARR14(2)                                      <---------WRKY12<--                        --------->LBD16                  --------->HSFB2a(2)      <---------WRKY38(1)                       --------->ANAC46                  <---------HSFB2a(2)     --------->WRKY18(1)<                      <---------LBD16                  ------>ZmHOX2a(1)        <-----------HVH21 <--                   <---------GLK1(1)                <---------ATHB12       --------->ZAT2         <--                   --------->GLK1(1)               ------>MYB46(1)         --------->At4g35610  -----                  --------->ARR14(2)               --------->ARR14(2)      <---------ZAT2 --------->ANAC58   --------->TOE2(3)--------->ARR14(2)             <---------ARR14(2)    --------->MYB46(3)   <------   --------->TOE1(3)<---------ARR14(2)             ------>MYB83         <---------At4g35610  -------- ->WOX13(1)       <-----------ARR10              --------->AtMYB61    <---------WRKY38(1) --------->ANAC58   caaaaccctaaatccatccgaatttccgcatccgcttcgccgataacaacaccaatcctccagacggagaagtcaacagctcggtcatcgacactcaccg  2379500 <---------ALFIN1 ---------WRKY38(1) -------->ZAT18 ---------WRKY12 ------->TCP16(2) ------>ARR14(2) -------TCP11(2) ------>PCF2 -------TCP20                                                                                    ---- -------ARR14(2)                                                                                 <--- ---------ZAT18                                                              --------->ANAC58  ------ -------PCF5                <----------DOF2                                  --------->ANAC58 ------- -------TCP16(1)          <------NtERF2                       <---------GLK1(2)               ------- ---->LBD16            <---------LBD16                  --------->ZAT2   --------->ANAC46     <------ ---LBD16    --------->ANAC58                           <---------ZAT2   --------->ANAC58     ------- ->MYB52(1)  --------->ANAC58                         ------>ZmHOX2a(1)  --------->ANAC58    <-------   ggtccactcggtctctcgctactctcgcggctttagcaatcgctgtaaccagagtcctagctcagaaactctctctcgcaatccagacttcaagtcccgt  2379600                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                 <---                                                                                                <----      <---------ANAC46                                                                       ------>NtERF2     <------NtERF2                                                                          ---------    ------>NtERF2                   ------->TEIL                                            ---------   --------->DEAR3(1)               --------->ARR14(2)                                      ---------   --------->At1g77200              <---------ARR14(2)                                     <---------   ----------->HVH21              <---------SPL7                       <---------LBD16    ------>NtERF2  --------->RAP2.3(1)             ----------->HVH21             ------>ZmHOX2a(2)         <---------ATERF1(1) ----->ARR14(2)                   --------->LBD16             --------->ARR14(2)          <---------At4g35610 ------ARR14(2)                  --------->DEAR3(1)           <---------ARR14(2)          --------->At4g35610 --->LBD16                     ------>NtERF2               --------->LBD16 <---------ARR14(2)-------- -->ANAC58                    --------->DEAR3(1)          <---------LBD16  --------->ARR14(2)-------- -->ANAC55(2)                --------->DEAR3(2)          <---------LBD16--------->LBD16  --------->DEAR3(1) ---ANAC55(2)   --------->GLK1(2)--------->RAP2.6(2)<---------CCA1(2) <---------LBD16 --------->ANAC58 -->ANAC58     <---------GLK1(2)<---------LBD16   <---------ANAC58   ------>ZmHOX2a(1)--------->ANAC46 --LBD16     <---------YAB1 --------->SPL7        <---------ANAC58  <---------SPL7    --------->ANAC58   aatcgccgacgggttacgattctctctcagtaccgccggacctgtcttcttcgcgtctctccgggatcgtcctccgggatacttgaacacgccgctgacg  2379700  Previous    Next  AGI:  At3g07425.1    Description:  unknown protein Range:  from: 2378356    to: 2378811    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g07430.1    Description:  EMB1990 (EMBRYO DEFECTIVE 1990). similar to YGGT family protein [Arabidopsis thaliana] (TAIR:AT4G27990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45259.1); contains InterPro domain Protein of unknown function YGGT; (InterPro:IPR003425) Range:  from: 2379199    to: 2380204    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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