Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------AHL20(2)                                                                                   <-----------GT1                                                                               --------->AHL20(2)                                                                               <---------AHL20(2)                                                                              --------->AHL20(2)                  <---------HSFB2a(2)     --------->MYB52(1)                  <---------AHL20(2)                --------->MYB52(1)    --------->ANAC58                        <---------AHL20(1)               <-----------GT1        --------->ANAC46                        --------->AHL20(1)            <---------ICU4   <---------ALFIN1                             <---------AHL20(2)      <--  ------>ZmHOX2a(1)        --------->AtMYB61                              --------->AHL20(2)  ------- ----->ZmHOX2a(2) --------->HSFB2a(2) --------->ANAC58                 --------->YAB1 <----------DOF2   gatcctttgtccaaaaattaccagaaaaaccacacattctaagcaaacagagttttccaagtttaagtctctctgataaatttattttctttctaaattt  2160200                                           <---------At4g35610                                  <----------DOF2                         <---------HSFB2a(2)                         --------->HSFB2a(2)                     <---------AHL20(2)                      --------->LBD16--------->HSFB2a(2)        --------->AHL20(1)                      ------>NtERF2  <---------LBD16            <---------AHL20(1)                >>>          <---------HSFC1(2)   <---------ARR11(3)               --------->AHL20(2)                >>>          --------->HSFC1(2)   --------->ARR11(3)               <---------AHL20(2)           -------- ---------GT1       <---------LBD16  <---------HSFB2a(2)       --------->AHL20(2)      --------->DAG2 -->AHL20(2)   <----------DOF2 <-----------ARR10 <-----------HVH21   ----------->GT1  ---------->DOF2   atacagtttcgatgtttctttttccgcctagaagagcttctcggaagctaatgtcatgcctcaaaattaatttgaaaaaaaaaactgaaaaaggaaggaa  2160300                                                     <------NtERF2                         --------->MYB52(1)                                                    --------->LBD16                        --------->ARR14(2)                                                   <---------ANAC46                      --------->LBD16                                                   --------->DEAR3(1)                   --------->ANAC58                                                  --------->ATERF1(1)                   --------->ANAC58                                                  <---------LBD16                       --------->ANAC55(1)                                                  <------NtERF2                         --------->LBD16                                                 ------>NtERF2                          --------->ANAC46                                                <---------O2                       <---------MYB52(1)                                                --------->DEAR3(1)                --------->LBD16 <--                                                <---------DEAR3(1)              <---------LBD16 <----                                                --------->O2               <---------ARR11(3)   <----                                               --------->ATERF1(1)         <---------ARR14(2)  <----- <------MYB83                                 <---------ATERF1(1)          --------->ARR11(3)  <----- <------MYB46(1)          ----------->GT1    ----------->HVH21             <---------GLK1(2)--------- >>>>>>CBP60g            <---------MYB46(3)  <---------DEAR3(1)          ----------->ARR10 <---------ARR14(2) >>>>>>SARD1        --------->ALFIN1         <------NtERF2             ---------->DOF2 <---------LBD16 --->GT1        <-------TEIL                ------>NtERF2 <------ZmHOX2a(1)--------->ARR14(2)<-------   atttggtgagaagaaacatacagtgggagggtgaacaaagaatgggcgcgacgccggagaggaagacgactgagaaagatactccggtacccggaacggc  2160400                                                                 --------->ATHB12                                                                <---------YAB1                                                                <---------ATHB12                                                     <-------TEIL<---------ICU4                                                   --------->AGP1--------->YAB1                                                   <---------ARR11(3)                                          <---------ANAC58      <------ZmHOX2a(2)                                        <---------MYB46(3)      --------->ICU4        <----------DOF2                                        --------->ABI4(2)   <---------TOE1(2)     <------MYB83         --------->At4g35610      --------->MYB52(1)<------ZmHOX2a(2)             <------MYB46(1)     --------->MYB52(1)    <---------DEAR3(1)      --------->ARR14(2)            <---------MYB46(3) ----NtERF2      <---------At4g35610    ------>NtERF2------>ZmHOX2a(2)           <---------AtMYB61 -----ANAC46     --------->ZAT2  <---------ARR14(2)<---------ARR14(2)           <--------P -----DEAR3(1)   <---------ZAT2  --------->ARR14(2)<---------GLK1(2)            <---------MYB55(1) ----------------WRI1     <---------LBD16<------NtERF2 <-----------HVH21        <---------MYB52(1) ----LBD16       --------->At4g35610  <---------MYB52(1)    --------->LBD16   <---------MYB46(3) >SPL7   <---------At4g35610 <------NtERF2<---------ANAC58 <---------ANAC46 ------->TEIL --DEAR3(1)----------->HVH21----------->GT1      ----------->ARR10       <---------YAB1  ----------->GT1   ggagagcaaacagatgacgagctgaatgggcggagaaaccggtggcttcgccagatccgtcgcgcgatcattgttatgaacggttggtctttggtaaaaa  2160500                                                                                               ------                                                                                           -------->P                                                                                        <---------ANAC55(1)                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                        <---------ANAC55(2)                                                                                  <---------TOE2(3)                                                                    --------->At4g35610 --------->ANAC55(2)                                                   <---------ARR11(3)       ----------->GT1------->TEIL                                        <---------At4g35610         ----------->GT1   <-----------GT1                              --------->MYB52(1)   --------->ARR11(3)     ---------->DOF2<---------SPL7   acaaaaaacagtacaagggagaagaaatagacaaacagattgagttgatggaagatgtttctaagaagagagcttaaaaagataaatgttacgtacccgt  2160600                                 <---------TOE1(3)                             *TSS<---------TOE2(3)                            --------->ZAT6        --------->YAB1                   <---------LBD16              <---------YAB1                 --------->GLK1(2)            <---------ZAT6                       ----------->GT1  <                 <---------ARR14(2)     --------->ATHB12                           <----------ID1   -     <-----------GT1       <---------TOE2(3) <---------YAB1                    ======================  --------->MYB52(2) --------->LBD16   <---------YAB1<-----------GT1           ---------->DOF2      < --->LBD16       --------->ARR14(2)    --------->ICU4<---------ICU4      ---------->DOF2       ------   gtgtttgtttctgttcgagtatccggattaagactaaggtactgattagtattaataactatttggattagtaccaaaagaaaaagagaaaaaaaactat  2160700                                                         <---------ARR14(2)                                                         --------->ARR14(2)                                                         <---------ARR11(1)                                                        <---------CCA1(2)                                                      --------->ANAC55(2)                                                    --------->ANAC46                                                  <---------ALFIN1                                                 <---------REM1(2)                  --------->bZIP60(2)        --------->ANAC46                  --------->REM1(1)        --------->MYB52(1)                  ====================================MYC_MYB     <---------ANAC58       <---------ARR11(3)   --------->ZAT14     <---------ANAC58       --------->ARR11(3)   <-------TEIL             <---------DAG2         ---- <---------WOX13(1)    ------------>CBF   <---------WRKY12          --------->ANAC46             <--- ------------CBF----------->RAV1(1)       <---------WRKY38(1)      <-------TEIL              <------- -------->ARR14(2)--------->TGA1a        ===========================HOX2a_HOX2a            <---------At4g35610 ===========================bZIP_DOF     <------ZmHOX2a(2)         ------->TEIL        <-----------HVH21 ---------ARR14(2)--------->O2         <------ZmHOX2a(1)<---------ARR14(1)<----------DOF2<-----------RAV1(2) --->MYB52(1)--------->ANAC46  <---------LBD16------->GAMYB  ------>ZmHOX2a(1)     <-----------GT1   cggattggcttatctatgccacatcagcaatatcacggagaggatcaacggtacacgcgtatcctcatgtacatcactttttttttttccttcagatggt  2160800                                        <------ZmHOX2a(2)                                       --------->AGP1                                       <---------ARR11(3)                                       --------->ARR11(3)                                       <---------ARR14(2)                                       --------->ARR14(2)                                       <----                                      --------->At4g35610                                       <----                                  --------->ANAC46    ---------->DOF2---------->DOF2         <-------                                  --------->ANAC58  <---------RAP2.6(3)                 --------->ZAT18 ----->ZAT18                      --------->ANAC58 --------->RAP2.6(2)--------->DAG2    <---------ZAT18 ------ZAT18               <----------DOF2    ---------->DOF2       ---------->DOF2---------->DOF2 --AtMYB61           ---------->DOF2  --------->GLK1(1) ----------->GT1 <---------------------WRI1   gggctatatatatcgacttcaaaaaaagccttttacaagcagatccactaaagccgaaaagaaaaatgccaaaaggccagacttacaaagtggacacact  2160900                               --------->ARR11(3)                           ---------->DOF2            <---------ZAT14                         --------->ANAC58   ------>MYB46(1)         <----------DOF2                         --------->ANAC58  ----------->RAV1(1)   <---------YAB1                     --------->ANAC58     ------->GAMYB         --------->KAN4(2) <---------YAB1      --------->ANAC58    --------->MYB46(3)    <---------KAN4(1) ------DOF2        ---------->DOF2  --------->TOE2(3) <---------ZAT18 -----DAG2      --------->TOE2(3)   --------->TOE1(3) --------->ZAT18    <-----------GT1       ------ --ALFIN1   --------->GLK1(1) --------->YAB1------>MYB83      <---------YAB1  <----------DOF2  ------   tttctcatagacagaattcattaaagcaagaaagataaccttaaccaacataagattgcacttgattattctttgttacactttgaagtttgaacaatta  2161000                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                               <---------YAB1--------                                                                              <---------ARR11(3)  <--                                                                              --------->ARR11(3)-----                                                                           --------->TOE2(3) <-------     --------->MYB46(3)                                            --------->ANAC46   ---------->DOF2 --->AHL20(2)                           --------->HSFB2a(2)   XXXXXXXXXXXXXXXXXXXX>MIR4240 <---------ZAT18 --->YAB1                   --------->ALFIN1                --------->ZAT6--------->YAB1   --------->ZAT18   aaaatgaacaaacaagttagagatgtgaatgtgaggctacttccaaaatacaatctatttcatcactaaacgcctaacattatctttggaaagtgagcta  2161100  Previous    Next  AGI:  At3g06850.1    Description:  DIN3/LTA1 (DARK INDUCIBLE 3); alpha-ketoacid dehydrogenase. similar to dihydrolipoamide S-acetyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G54220.2); similar to dihydrolipoamide S-acetyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G54220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44807.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain Catalytic domain of components of various dehydrogenase complexes; (InterPro:IPR001078); contains InterPro domain E3 binding; (InterPro:IPR004167); contains InterPro domain Lipoamide Acyltransferase (InterPro:IPR015761); contai Range:  from: 2157980    to: 2160629    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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