Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->HSFB2a(2)                                            <---------DOF5.7(2)            --------->AHL20(2)                                                           --------->ARR11(3) ------->DAG2               <---------HSFB2a(2)               <----------DOF2        ---------->DOF2 ------->DOF2              ------>ZmHOX2a(2)              ---------->ID1      <---------HSFB2a(2) --->YAB1   <---------AHL20(2)                        <----------DOF2         --------->HSFB2a(2) >TOE2(3)  --------->AHL20(2)                       <---------HSFC1(2)       <---------LBD16  ------- --DOF2<-------TEIL    <---------YAB1               --------->HSFC1(2)   <---------MYB46(3)--------->MYB52(1)   taaagttgattcatttaatcaaaccatgatcgagaactgaatcaaacaagaagaagctttgtttctttattccagttgttctggattaaaagataacgat  2082900                                           <----------DOF2                   ------>MYB83          --------->ZAT14                     <----------DOF2                   ------>MYB46(1)       <---------ZAT14              ------>ZmHOX2a(2)                 --------->MYB46(3)  <---------ALFIN1                <------ZmHOX2a(2)                --------->TCP15(2)   --------->AtMYB61               <---------GLK1(1)       <-------               <---------TCP15(1)   <---------MYB55(2)              --------->ARR11(3)      <--------               --------->PCF2       --------->MYB46(3)        <---------ANAC55(2)<---------HSFB2a(2)               <---------TCP20 --------->TOE2(3)              --------->ANAC55(2)--------->HSFB2a(2)          --------->TOE1(2)  <-----------ARR10     <---------GLK1(1)<---------AGP1          ---------    ------>ZmHOX2a(2)        <---------ARR14(2)    --------->GLK1(1)<-----------ARR10  --------->ANAC58 -->ATHB12<---------LBD16   <---------CCA1(2)     <---------GLK1(2) <---------ARR11(3) --------->ANAC58   ttgggatcgaaaccagggacccactactgcaaatctcaaccactgcattacagaattccatattacttaagatctcagtctttgtagaaacgaaatcatt  2083000                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                -----                                                                                                -----                                                                                  <---------ARR14(2)<                                                                                  <---------GLK1(2)<-                                                                                  --------->ARR14(2)-                                                                               ------>ZmHOX2a(2)-----                                                                              <------ZmHOX2a(2) -----                                                  ------>ZmHOX2a(2)          <---------ARR14(2) -----                                                --------->ARR14(2)           --------->ARR14(2) <---- --ICU4                                         <---------ARR14(2)       <---------LBD16       <----- -ATHB12                                    <---------LBD16            <-----------GT1   <----------- >ICU4          --------->ARR14(2)---------->DOF2<------ZmHOX2a(2)<---------TOE2(3)  ----------->GT1<   ccactatcgactcatcactatcccctctataggccctaaaacccaaaccggatcgacaagttttgtttgagattaaccggatcggattcgaaaaaaacac  2083100 ------>ZmHOX2a(2) ------->ARR14(2) --------ARR14(2) ------->GLK1(2) ----------ARR10 ----->TEIL -------CCA1(2)                                                                                     - ---->ANAC58                                                                                      <-- ---->ANAC58                                                                                      <-- ------ZmHOX2a(2)                                                                                 <-- --------AGP1                                                                                    ---- -------->At4g35610                                                                              ---- ---->ANAC46 <---------GLK1(1)                                                                   ---- ---->ANAC55(1)                                         <-----------HVH21                        ---- ---->ANAC55(2)           --------->DAG2          ----------->RAV1(2)                            ---- -----ANAC55(2)        --------->YAB1            ------->TEIL                                    ---- ----LBD16   --------->GLK1(1)                   --------->GLK1(2)                               <--- ---OsCBT--------->AtLEC2---------->DOF2      <---------MYB52(2)                                <---- ---------At4g35610   <---------ATHB12   <------ZmHOX2a(1)                         --------->MYB52(1)   ggatctgagtcatggaaatctccaatgaaaagttagagaaataggaaaacgaacctgtggtcacttagccgagtcgagcgagtcaaaacggagcaatgtt  2083200   <---------ANAC46 -------->ALFIN1                                                                                 *TSS ----MYB46(1)                                                                                   ----- -------ANAC46                                                                                  <---- ----MYB83                                                                                      ----- ----->MYB55(2)                                                                                ------ ----->MYB111(2)                                                                              ------- ----->MYB46(2)                                                                            <---------At4g35610 ----->MYB111(1)                                                                           --------->At4g35610 ----->MYB59                                                         --------->ANAC58      <---------ZAT2 ----->MYB52(2)         <------ZmHOX2a(1)                <---------AHL20(2)                --------->ZAT2 ------AtMYB61       <------ZmHOX2a(1)                  --------->AHL20(2)            <---------At4g35610 -----MYB55(1)   <---------MYB52(1)             <------ZmHOX2a(1)    --------->ANAC58 --------->At4g35610   aggtggagagtagattgcagttaggaggaagggaagggaatggtttaagaggaaaccattaaatgggagggaagaaacaaataagatgagctcagctacc  2083300                                                                                <---------GLK1(1)                                                 --------->ALFIN1               --------->GLK1(1)                                                <-------PIF5                    <------ZmHOX2a(2)                                                --------->LBD16                <-----------ARR10                                                ------->PIF5                   <---------ARR14(3)                                             <---------ANAC46                  --------->ARR11(3)                                          ----------->HVH21                    --------->ARR14(3)                                         <-------PIF5                          <---------ARR11(1)                                         ------->PIF5                          <---------ARR11(3)                                         ------->MYC2                          --------->ARR14(2)                                         <-------MYC3--------->MYB111(2)       <---------AGP1                                         ------->MYC3<---------MYB46(3)        <---------ARR14(2)                                         <-------MYC2--------->MYB111(1) --------->ARR14(2)                                        <---------bZIP60(2)              <---------ARR14(2)                                        ----------->RAV1(2)             <---------At4g35610                                        <---------O2 --------->MYB46(2) <---------ZAT2                                        <---------TGA1a            ----------->HVH21        <--------                      <---------AHL20(1)--------->O2<--------P    <-----------HVH21         <--------                      <---------AHL20(2)--------->TGA1a          --------->ANAC58      <------ZmHOX2a(2)  <---------------AGL15    =======================bZIP_DOF       --------->ANAC58     --------->ARR14(2)  --------------->AGL15    ---------->DOF2--------->ALFIN1       --------->ANAC46------>ZmHOX2a(2) ----------------->AGL1<---------YAB1   =====================MYC_MYB    --------->At4g35610 --------- ---->AtMYB61         --------->AHL20(2)<---------ANAC55(2) <---------ZAT18   <---------ARR14(1) -----ALFIN1          --------->AHL20(1)<---------ANAC46  --------->At4g35610 <---------CCA1(2) ---->ZAT6          <---------YAB1      <---------ANAC58  <---------At4g35610--------->LBD16<-------- --->MYB46(3)      --------->AHL20(2)   <---------ANAC58 --------->MYB59--------->ZAT2<---------ARR14(2) ->P          ------------>CBF          --------->ANAC55(2) --------->ZAT18<---------LBD16 <---------CCA1(2)   actgccagatagagaagacaatattatattaaaggtgtaatcacgtggcccgtggtagttagctcacaagtcacagctccggatctccgatccaaatctt  2083400                <-------GAMYB                            <---------ARR11(3)               --------->MYB111(2)                       --------->ARR11(3)               <---------MYB46(3)                 --------->YAB1                        --------->AHL20(1)               --------->MYB55(2)              --------->DAG2                           --------->AHL20(2)    <----------DOF2     --------->ZAT14       ---------->DOF2                           <---------AHL20(2) -ARR11(1)   <---------ANAC58               <------ZmHOX2a(1)                          --------->AHL20(2) -ARR11(3)   <---------ANAC58             <---------TOE1(3)                        --------->AHL20(2) >ARR14(2)   <-------GAMYB   <-------TEIL <---------TOE2(3)   <----------DOF2     --------->AHL20(2)- -ARR14(2)  <---------MYB46(3)    <---------AHL20(2) ---------->DOF2          --------->AHL20(2) <---   tttattcttttttttggttgttgttgtgaagtccatttttttttaaggaaaagcataaagatgtctttctatggaaacaaaaaaataaaaaaaattgagt  2083500                                                                    --------->AHL20(2)                                                              ----------->GT1         --------->AHL20(2)     ---------->DOF2               <---------ANAC55(2) ---------->GT1 --------------->AGL15 <-------TEIL <----------DOF2  <---------AHL20(2) ------MYB46(3) <---------------AGL15--------->CCA1(2) --------->ANAC55(2)                  <--------   tgttgttaaaaaaaaatacaaatttgagtaaatgaaaagatacaactctaactctttaagtattaagtaaaaaaatagattgaagattatttctatgttg  2083600                 ---------->DOF2                --------->AHL20(2)                <---------AHL20(2)            --------->AHL20(2)          --------->TOE2(3)          --------->YAB1        <---------TOE2(3)        <---------YAB1  <---------CCA1(1)       --------->YAB1   <---------RVE1(1)       <---------AHL20(2) <---------AHL20(2)               <---------At4g35610       --------->AHL20(2)xxxxxxxxxxxxxxxx>smallRNA(i)      --------->At4g35610    <---------YAB1     <---------AHL20(2)<---------GLK1(2)          <---------TOE2(3)           <---------AHL20(2)     --------->AHL20(2)<---------ARR11(3)        ---------->DOF2             <---------ICU4  <---------AHL20(1)   --------->ARR11(3)       <---------AHL20(2)       --------->AHL20(2)  --------->AHL20(1)  <---------RVE1(1)         --------->AHL20(2)       <---------AHL20(2) ---RAV1(1) <---------AHL20(2)               --------->WOX13(1)       <----------DOF2          <-----   gatatatattaatattaattaaagagatttttttttttttttggcatcaattaaagaaaacagctaatatttcttttaatttttatgtttgctaagttta  2083700                                                                               --------->AHL20(2)                                                                             <-----------TBP                                                                          --------->AHL20(1)                                                                    --------->AHL20(2)                 --------->YAB1                               <---------AHL20(2)        <---------MYB59                                 --------->AHL20(2)<---------AHL20(1)    <---------AHL20(2)                                 <---------AHL20(2) --------->AHL20(2) --------->AHL20(1)                                    --------->AHL20(2) <---------AHL20(2) --------->AHL20(2)   <---------YAB1               --------->AHL20(2)    --------->AHL20(2) <---------ARR11(3)<---------YAB1                  <---------AHL20(2)<---------AHL20(2)         ----- ------GT1      <---------YAB1               <---------YAB1  --------->AHL20(2)<---------AHL20(2)   ccatatattatctaacttcttataatttttgttcatatttctaaattttgattttaaataattttaaattttaaattttatttatattaaaaacatactc  2083800  Previous    Next  AGI:  At3g06650.1    Description:  ACLB-1 (ATP-citrate lyase B-1). similar to ACLB-2 (ATP-citrate lyase B-2) [Arabidopsis thaliana] (TAIR:AT5G49460.1); similar to ATP citrate lyase a-subunit [Lupinus albus] (GB:CAC86995.1); similar to ATP citrate lyase alpha subunit [Glycyrrhiza uralensis] (GB:ABR15094.1); similar to ATP-citrate lyase/succinyl-CoA ligase [Medicago truncatula] (GB:ABN07962.1); contains InterPro domain ATP-citrate lyase/succinyl-CoA ligase, active site; (InterPro:IPR017440); contains InterPro domain Succinyl-CoA ligase, alpha subunit; (InterPro:IPR005810); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Citrate synthase-li Range:  from: 2079039    to: 2083297    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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