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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                              ---------->ID1
                                                                           --------------->AtSPL8
                                                  <-----------GT1   --------->AHL20(2)
                                               --------->ARR14(2) ----------->GT1
       --------->At4g35610                     <---------ARR14(2)<---------TOE1(3)
       <---------At4g35610    <<<<<<<<<<GT-1--------->YAB1       <---------TOE2(3)
------->RAV1(2)               <---------ARR11(3)  --------->YAB1---------->DOF2
----->At4g35610      ---------->DOF2  <---------HSFB2a(2)  --------------->AGL15   <---------AHL20(2)
------At4g35610  --------->ATHB12     --------->HSFB2a(2)  <---------------AGL15 <----------DOF2
 
tctgcaactcagaagacgcttgattaaagtctatatcatttgcagaagcatattcacaatctctagttaaagtaaatttttgttctttatttgttatcaa  1823800
                                                                       ------>ZmHOX2a(2)
                                                                      <------ZmHOX2a(2)         ----
                                                                     --------->ARR11(3)         ----
                                                                     --------->AGP1             <---
                                                                <---------WOX13(1)    --------->AHL20(2)
                                                              <---------ICU4          <---------AHL20(2)
                                   <---------DAG2             --------->ATHB12        <---------YAB1
            --------->AHL20(2)  <-----------GT1              <---------YAB1        <----------DOF2
     --------->ANAC58      --------->ICU4                    --------->ICU4     <---------ARR11(3)
     --------->ANAC58     ----------->GT1                  --------->YAB1       --------->ARR11(3)
   ---------->DOF2      ---------->DOF2               <----------DOF2<---------ARR11(3)  <---------WOX13(1)
 
gagaaggaaagcaaattatacacttgagaaagtattaaccttttcaaataagttcaactttctcatgattgagatctatggaagaacttttaattgaagt  1823900
                                           --------->LBD16
                                           ------>ZmHOX2a(1)
                                         ------>ZmHOX2a(2)
                                        <------ZmHOX2a(2)
                                       <---------GLK1(2)
                                       --------->ARR14(3)
                                       <---------ARR14(3)
                                       <---------ARR11(3)
                                       --------->ARR11(3)
                                   ---------->DOF2
             ===================================HOX2a_HOX2a
             ===========================HOX2a_HOX2a
      =================================HOX2a_HOX2a
      ------>ZmHOX2a(1)          =================HOX2a_HOX2a
      ==================================HOX2a_HOX2a
     <---------MYB59             ------>ZmHOX2a(2)
    ------>ZmHOX2a(2)           <------ZmHOX2a(2)
    ================HOX2a_HOX2a ==================HOX2a_HOX2a
   <------ZmHOX2a(2)           --------->AGP1
   =================HOX2a_HOX2a--------->ARR11(3)
  <---------ARR11(3)           <-----------ARR10
  <---------ARR14(2)           <---------AGP1
  --------->ARR14(2)           <---------ARR14(2)
  --------->AGP1               --------->ARR14(2)
  <---------GLK1(2)            <---------ARR11(3)
  --------->ARR11(3)--------->GLK1(1)  --------->ARR14(2)
----------->ARR10   <---------GLK1(1)  <---------ARR14(2)---------->DOF2
----->ZAT14  ------>ZmHOX2a(1)<---------CCA1(2)  <-----------GT1                               -----
----->ZAT18  ==========================HOX2a_HOX2a --------->ZAT6                              <----
------ZAT14  ==================================HOX2a_HOX2a           ---------->DOF2        <-------
 
gaacagatcctaactcctaagagatttcagaccagatctaaagatcctgaataaacactataaagagagacagaaagagtttcaagaacagagatttact  1824000
                                      <------NtERF2
                               <---------At5g28300
                               --------->MYB52(1)                  <------ZmHOX2a(1)
      <<<<<<<<<<<<<<<<<LFY     <---------DOF5.7(2)              <------NtERF2
  --------->ANAC58            <-----------GT1                   --------->At4g35610              <--
  --------->ANAC58          <---------HSFC1(2)                  <---------At4g35610              <--
---------->AGL15            --------->HSFC1(2)             <---------TOE2(3)                    <---
-----------AGL15         <------ZmHOX2a(1)             <-------GAMYB                       ---------
----GT1          ---------->DOF2    --------->ALFIN1  <---------MYB46(3)       ---------->DOF2  ----
 
tcaacaagaaaacaatggaagaaagagaggaagttaccggtgtcgctaagaacagggcgattgaggcagaggagtatggagagaaagagaagaagtggaa  1824100
                                                                   --------->ATHB12
                                                                   <---------AHL20(2)
                                                                  --------->AHL20(2)
      ------>ZmHOX2a(2)                                <---------WOX13(1)
      --------->ANAC58                               --------->ATHB12
      --------->ANAC58                   <---------CCA1(1)       <---------AHL20(2)
  --------->ETT(2)                       <---------RVE1(1) <---------ANAC46
-------ANAC58                           <---------ARR11(3) <---------ANAC58
-------ANAC58                           --------->ARR11(3) <---------ANAC58
------HSFC1(2)           --------->HSFB2a(2)        <---------YAB1<---------AHL20(2)
>ALFIN1      ---------->DOF2           --------->YAB1<---------MYB46(3)   ---------->DOF2
----->HSFC1(2)           <---------HSFB2a(2)  <---------YAB1    --------->YAB1               -------
 
gcttgtcgatcgccattgaagcaggtttctagagttctcaaatgatattttgatggtgattggcttatattaattgagaaaggagagtgagagaaatggt  1824200
                                                                        ------------>CBF
                                                  --------->ZAT2       ------>NtERF2
                                                  <---------ZAT2       <---------RAP2.6(3)
                                                  --------->At4g35610 --------->ATERF1(2)
                                                  <---------At4g35610 --------->RAP2.3(3)
                                              <-----------HVH21       <---------ETT(1)
              ---------->DOF2              <---------ANAC58           --------->DEAR3(1)
    <---------DAG2                         <---------ANAC58          --------->DEAR3(2)   <---------
    <----------DOF2  *TSS              <----------DOF2          --------->ALFIN1<---------TOE2(3)
---->GT1   --------->YAB1              <---------DAG2        <---------TOE2(3)  <---------TOE1(3)
 
tacttcgcttttactcataaagagttgtttgattctgttctgcttttcttgtcagctcgattttgacgttgtgccgacaatttaaggcatttttaactaa  1824300
                                 --------------->AGL15
                                 <---------------AGL15
                                ----------------->AGL3                                      <-------
                          <------NtERF2                                                     --------
                     --------->ANAC46                                                   ---------->DOF2
                     --------->ANAC58                --------->ANAC58               >>>>>>>>>>WRKY26
                  --------->ARR14(2)                 --------->ANAC58               >>>>>>>>>>WRKY38
              <-----------------AGL1             <------ZmHOX2a(1)                  >>>>>>>>>>WRKY43
     --------->PCF5  --------->ANAC58           <----------ID1                     --------->WRKY12
   <------MYB46(1)<---------ARR14(2)      <------ZmHOX2a(1)                  --------->ANAC58
   <------MYB83  ------>ZmHOX2a(1)      <---------TOE1(3)                    --------->ANAC58
--GT1--------->PCF2 --------->RAP2.6(3) <---------TOE2(3)        ---------->DOF2   --------->WRKY38(1)
 
ttcgcttggtccctctcatcctatacggcatcgtttctaatataaggatagaggacaagaacaagttccaaagagaaggcaaacaattgaccaaagttct  1824400
                                                                         ------>MYB46(1)
                                                                         ------>MYB83
                       ----------->GT1     --------->TOE1(3)           <---------MYB59
            --------->ANAC55(2)          -------->P                    <---------------AGL15
            <---------ANAC55(2)      --------->ARR11(3)                --------------->AGL15
        <-----------HVH21<---------YAB1  ------->TEIL                 ----------------->AGL1
--ARR11(3)  --------->ANAC58 <-----------GT1            <---------ARR11(3)  ----------->GT1
->ARR11(3)  --------->ANAC58<---------YAB1 --------->TOE2(3)   --------->YAB1
 
tgaaaactcaatgtcaagtaatcgatttgttattacaaaacatctaccttaagtaccaagatgtgatcacaataccaaatagtgaatcaaacaaaaaaac  1824500
                                           --------->MYB46(3)
                                          ------>MYB46(1)
                                          ------>MYB83
                                         ----------->RAV1(1)
                                         --------->MYB52(1)
                            --------->TOE1(2)
                          --------->MYB52(1)       <---------ARR11(3)
                    --------->ANAC46    <---------MYB55(2)
                   -------->P           --------->MYB46(3)
                   ------>MYB83   --------->ARR14(2)
                 <---------MYB111(1)    --------->AtMYB61
                 <---------MYB46(2)    --------->MYB46(3)    <---------YAB1             <---------ALFIN1
         ---------->DOF2  <---------ARR14(2)       --------->ARR11(3)                 <-----------GT1
     <-----------HVH21    --------->ARR14(2)   <----------DOF2                      <-----------HVH21
    ----------->GT1------>MYB46(1)<---------ARR14(2) ------>ZmHOX2a(2)           <----------DOF2   <
 
aatcgaagtgtcaaaagtcacctactccataactgcgattccaccaacagctttgatcttggctatgatttcattagcttcttcctttgtcacaccttgt  1824600
             <----------DOF2<----------DOF2
            <---------HSFB2a(1)                                           <-----------GT1   --------
            --------->HSFB2a(1)       <-----------HVH21    --------->KAN4(2)       --------->ARR11(3)
         <------NtERF2   --------->ARR11(3)               --------->HSFB2a(1)      <---------ARR11(3)
        --------->LBD16  <---------ARR11(3)              ------->TEIL <----------DOF2------>ZmHOX2a(2)
      <---------LBD16  --------->ANAC58                 <---------DOF5.7(2)    <----------DOF2 <----
---------TOE2(3)       --------->ANAC58              ----------------------->TaNAC69(2)     <-------
 
ttaagaatagccgggactttctccacaagctctttcgcttccttcagacccaaacttgtgaacgttctcacttcttttatcactttgatcttatcagatg  1824700
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AGI:  At3g06035.1   
Description:  Identical to Uncharacterized GPI-anchored protein At3g06035 precursor [Arabidopsis Thaliana] (GB:Q84MC0;GB:Q8H7F7;GB:Q8L9J0); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19250.1); similar to unknown [Populus trichocarpa] (GB:ABK94712.1)
Range:  from: 1823105    to: 1824222    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At3g06040.1   
Description:  ribosomal protein L12 family protein. similar to ribosomal protein L12 family protein [Arabidopsis thaliana] (TAIR:AT4G36420.1); similar to ribosomal protein L12 family protein [Arabidopsis thaliana] (TAIR:AT1G70190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64322.1); contains InterPro domain Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719); contains InterPro domain Ribosomal protein L7/L12, C-terminal; (InterPro:IPR013823); contains InterPro domain Ribosomal protein L12, chloroplast (InterPro:IPR015608)
Range:  from: 1824382    to: 1825669    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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