Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->AHL20(1)                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                                <---------YAB1                                                              --------->YAB1                                                 --------->ARR11(3) --------->YAB1                                      <---------AHL20(2)      <---------ICU4        ---------->DOF2                                      --------->AHL20(2)      <--------HAHB4      ------>ZmHOX2a(1)                                      <---------AHL20(1)     <---------YAB1      --------->TOE2(3)   ----------->GT1                <---------AHL20(2)         --------->ICU4     ------>ZmHOX2a(2) ---------->DOF2                 <---------AHL20(2)        --------->YAB1     --------->ARR11(3) ------>HSFB2a(2)             <---------AHL20(2) <---------ARR11(3)<---------YAB1--------->TOE1(3) -------HSFB2a(2)         <----------DOF2       <---------GLK1(1)--------->YAB1<---------YAB1 -ALFIN1          <---------ETT(2)--------->AHL20(2)      <-------TEIL        <---------ARR11(3)  <--   ctataaagtataaactactatcgaccatctttttatttattttattttggagttcttacattcatcattataatacacatgatccttaaagcatatagtg  1554300                                                                <----------DOF2                                                             ------>ZmHOX2a(1)                                                         <---------ARR11(3)                                                         --------->GLK1(2)                                                         <---------ARR14(2)                                                         --------->ARR14(2)                 ---------                                          ------->TEIL   --------->ARR11(3)            <----------DOF2      <<<<<<<<<MYB98                     <-----------GT1XXXXXXXXXXXXXXXXXXX>MIR866-3P---------->ID1     ----------->GT1           <-----------GT1     --------->HSFB2a(2)              <-----------GT1 -------ANAC46              <---------CCA1(2)      <---------HSFB2a(2)          <----------DOF2   tggtatatgttaaaacagaacaaactacttatatcaccattttgaacctgtttttagaaaatccttctttaaaaattcaatgcttttttctttttcttaa  1554400                                                  <---------YAB1                       <---------AHL20(1)                 <---------AHL20(2)              --------->KAN4(2)                  --------->AHL20(2)                 --------->AHL20(2)             <---------KAN4(1)                <---------ANAC55(2)                <---------ATHB12                --------->KAN4(1)                --------->ANAC55(2)              --------->WOX13(1)      ------>ZmHOX2a(1)   --------->YAB1        <-------TEIL    <-------TEIL--------->AHL20(2) ------>ZmHOX2a(1) <---------HSFB2a(2)--------->ARR11(3) <--------- >TOE2(3) <-----------GT1--------->ZAT18      <---------GLK1(2)        --------->YAB1  --------->AHL20(1)   ctcaagttcatttcaccaattaataagagcacaattcctcctccaatagattattctcgataagaattcacaaacatattgatacataatatataactta  1554500                                                                   --------->ATHB12                                                                   --------->YAB1                                                                   <---------ICU4                                                                   -------->HAHB4                                                                  <---------YAB1                                                                  --------->ICU4                                                                  <---------ATHB12                                               <---------------AtSPL3                               <                                               <---------------AtSPL8                               -                       <---------ANAC46       <---------ZAT14    <---------TOE2(3)            <------ZmHOX2a(1)                  <-------GAMYB               --------->ZAT14   --------->YAB1              <--------           <---------AHL20(2)              <---------ANAC46    --------->ICU4             ---------->DOF2           --------->AHL20(2)            <---------ZAT14      <---------YAB1             <---------AHL20(2)           --------->AHL20(1)         <---------TOE2(3)   ----------->GT1           --------->AHL20(2) --GT1    --------->AHL20(2)          <---------TOE1(3) ---------->DOF2 <---------TOE2(3)--------->AHL20(2)   tctaaatataaaaaaaattgggttgaagtgtatacatgttaagtttagtgaagtactgaaaagtattaatgattaagggtctctaagtaaattaaaggat  1554600                                                                <-------GAMYB                                                               --------->MYB55(2)                                                               <---------MYB46(3)                                                             <---------At4g35610                                                         --------->ARR14(2)              <-----------                                                         <---------ARR14(2)          <------MYB46(1)                                                         <---------MYB52(1)          <------MYB83                                                        <---------RAP2.6(3)        <---------MYB52(1)             ------------>CBF                           <---------SPL7          <------NtERF2            --------->ANAC58                         ------>NtERF2             ------>NtERF2            --------->ANAC58                         <------------------SPL14 <---------ALFIN1 <---------------AtSPL3                          --------->ANAC46             --------->DEAR3(1) <---------------AtSPL8                        <-----------GT1 <-----------RAV1(1)<-------GAMYB ---------ZAT14                            <----------DOF2--------->SPL7   --------->ANAC58 -------->ZAT14                       --------->GLK1(2)<---------ANAC58    --------->ANAC46 -TOE2(3) ---------->DOF2            <---------GLK1(2) <---------ANAC58    --------->ANAC58      <---   agtgaagtactgaaaagcaattcatatttttgggagagcgattctctttaaacgctgccgttcggctgttgttctaaacgccaccgttggtaattgtatt  1554700                                                                       --------->MYB52(1)                                                                --------->ANAC55(2)                                                                <---------ANAC55(2)                                                       --------->At4g35610                                                       <---------At4g35610                                                     ---------->CDC5  ------->GAMYB                                                   --------->ANAC46  --------->MYB46(3)                                                 <---------ALFIN1    <---------MYB52(2)                                               ----------->RAV1(1) --------->MYB52(1)                                             <------NtERF2  <---------MYB59                                            ------>NtERF2  --------->bZIP60(2)       <---------ANAC46                 <---------WRKY38(1)<---------bZIP60(1)       <---------ANAC58                 ----------->HVH21<---------ZAT18       <---------ANAC58                 --------->ETT(2)--------->DEAR3(1) -CBF *TSS            --------->HSFB2a(2)  --------->ANAC46--------->bZIP60(1)                    --- ------AHL20(2)       <---------HSFB2a(2)<---------ATERF1(1)--------->AtMYB61--------->CCA1(2)    ---   aaaacgttgtcgtataatctccctctcgaggtgataagagagtcgacggcaacactcagcgacctcacttaacgaacagagacgagaaatgtctctgaaa  1554800                                                                             --------->At4g35610                                                                             <---------At4g35610                                                                          --------->WRKY38(1)                                                                          ----------->HVH21                                                                          --------->WRKY12                                                                         <---------MYB52(1)                                                                         <-----------HVH21                                                                        <---------At4g35610                                                                        --------->At4g35610                                                                        --------->LBD16                                                                      <---------LBD16           <----                                                                   ------->GAMYB            ---------              <---------ZAT14                                    -------->P <-----------------------TaNAC69(2)              --------->ZAT14   ----------->GT1                 ------->GAMYB<---------ANAC46------>NtERF2   <-----------GT1             <---------TOE2(3)               <---------MYB111(2)          ------>NtERF2 ------>TOE2(3)      --------->At4g35610                       <---------MYB55(2)         <---------LBD16 ------>TOE1(3)      <---------At4g35610                       --------->MYB46(3)      -------->P  <-   ccttatttctctctactatactcatctcccactaatgtaaaactttccaacttcttaatcgctcaacaaccctccggtgacctgaaaactaccccggccg  1554900                                                           ------>ZmHOX2a(1)                                                      ------>ZmHOX2a(2)                                            <---------ANAC46                                          <---------HSFB2a(2)                                 ------>NtERF2      >>>>>>>>>ARR2                              --------->MYB52(1)    --------->ARR14(2)                             ------->GAMYB--------->HSFB2a(2)             <------MYB46(1)    --------                             --------->DEAR3(1)     >>>>>>>>>ARR1         <------MYB83     --------->ARR14(2)               <--------P    ----------->HVH21      <---------ARR14(2)   <---------MYB46(3)<---------ARR14(2)             <---------MYB46(3) <---------DEAR3(1)  --------->ARR11(3)   <---------AtMYB61<------ZmHOX2a(1) --NtERF2<---------ALFIN1   <---------MYB55(2)     <------ZmHOX2a(1) <---------YAB1     <---------TOE1(2) >LBD16 <---------ZAT14     --------->DEAR3(2)--------->ALFIN1   <---------ANAC58   <---------LBD16 -----ZmHOX2a(1)            --------->MYB46(3)<---------REM1(1)  <---------ANAC58<---------ARR14(2)   aggagttttctccactggttgagaaattcaaccgacggcttcttctgggtgtaggatcgtcctctgttcttgcgattggtgcgaatttcggaggaaccac  1555000                                                 <-----------HVH21                                                 <-----------TGA1                                   --------->GLK1(2)                                  <---------GLK1(2)     <-----------GT1                             -                                 <------NtERF2  <---------bZIP60(1)                   --------->ARR11(1)                                <------NtERF2   --------->bZIP60(2)               ------->TEIL     --                                --------->LBD16 --------->O2                 --------->At4g35610   <-                               --------->RAP2.6(2)--------->TGA2(2)   --------->CCA1(2)            --                         --------->ARR14(2)     <---------O2         --------->ARR11(3)            <-                         <---------ARR14(2)     --------->bZIP60(1)  --------->ARR14(2)           <--                     --------->LBD16            --------->ANAC46     <---------ARR14(2)    <-------GAMYB ->MYB46(3) <----------DOF2   <---------LBD16  <-----------STF1     <------ZmHOX2a(1) <---------ARR14(2)   gagttttatactcggtttatcgccagggataggccggaatctaaaactcgacgtcatttatccgattggaggatatagcagatgtatcgatacggttgaa  1555100     <--------P     <---------MYB52(1)             <---------AHL20(1)                                              -    <-------GAMYB                   --------->AHL20(1)                                            <-- -------->ARR14(1)                  --------->ARR11(3)            <---------WOX13(1)            ----- ------->ARR11(1)                   <---------ARR11(3)          -------->HAHB4                  <---- --------GLK1(2)                  <---------TOE2(3)             --------->ATHB12               <----- ------->ARR14(2)           --------->LBD16                    <---------YAB1              --------->AHL20(2) --------ARR14(2)         <---------LBD16                      <---------ATHB12            <---------AHL20(2) ----ZmHOX2a(1)         <-----------GT1 <-----------GT1        --------->ICU4          <---------GLK1(2)   ggattcggttagtaagtcatcgaatttctccggtttaagatattaccaattggaagataaatcaaatgattgtcaattttgtaatcacagaatttatata  1555200  Previous    Next  AGI:  At3g05410.1    Description:  similar to hypothetical protein OsI_004967 [Oryza sativa (indica cultivar-group)] (GB:EAY77120.1); similar to hypothetical protein OsJ_004568 [Oryza sativa (japonica cultivar-group)] (GB:EAZ14743.1); contains InterPro domain Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124) Range:  from: 1554706    to: 1555505    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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