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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
<---------
YAB1
--
--------->
AHL20(1)
--------->
YAB1
<--
<---------
ARR11(3)
-------->
HAHB4
<---
<---------
AHL20(1)
<---------
ICU4
<---
--------->
ARR11(3)
--------->
YAB1
----
------>
MYB46(1)
<-----------
ARR10
----
------>
MYB46(1)
------>
MYB83
--------->
At4g35610
<---------
YAB1
<---
------->
GT1
--------->
GLK1(2)
--------->
HSFB2a(2)
--------->
ICU4
----
--
TOE2(3)
<-----------
ARR10
<---------
HSFB2a(2)
<---------
YAB1
<-----------
GT1
----
->
DOF2
------>
MYB83
<---------
ARR14(2)
<----------
DOF2
--------->
MYB46(3)
<---------
ICU4
------
tgttaaaaccaaatgttttagcaaatctaaccaaatatttttttctttgggaagctctaaccaaaaatgattatccttggataattactcaattagtaag
1539200
--------->
ANAC58
<---------
AHL20(2)
--------->
ANAC58
--------->
AHL20(2)
--------->
ANAC46
<---------
AHL20(1)
---->
ZmHOX2a(2)
<---------
AHL20(2)
----
ZmHOX2a(2)
<---------
YAB1
------
ARR14(2)
--------->
ATHB51
------
ARR11(3)
<---------
ICU4
<---------
At4g35610
----->
ARR11(3)
--------->
YAB1
--------->
At4g35610
----->
ARR14(3)
<--------
HAHB4
------>
ZmHOX2a(1)
------
ARR14(3)
<---------
YAB1
<---------
AHL20(1)
---
----->
AGP1
--------->
GLK1(1)
<---------
AHL20(2)
--------->
AHL20(2)
<--
----->
ARR14(2)
--------->
ICU4
<-----------
GT1
--------->
AHL20(1)
---
----->
ARR10
<---------
GLK1(1)
--------->
AHL20(2)
--------->
YAB1
<---
atcttcaagaaactgatttcccccattattattttatttatatttttcggtttataaaactccagtaatttcaaatataatcctctgctaccgataccag
1539300
<-------
TEIL
--------->
ALFIN1
------->
PIF5
<-------
MYC4
------->
MYC4
<-------
PIF5
<-------
MYC2
------->
MYC2
<-------
MYC3
------->
MYC3
<---------
TGA1a
--------->
PIF3(3)
--------->
ANAC58
<---------
O2
--------->
ANAC58
--------->
ANAC46
--------->
TGA1a
------->
MYC3
--------->
ANAC58
--------->
O2
<-------
MYC2
--------->
ANAC58
--------->
ANAC46
<------
ZmHOX2a(2)
------>
ARR14(2)
--------->
ANAC58
--------->
ARR11(3)
<------
-------
ARR14(2)
-------->
P
<---------
PIF3(3)
<-------
MYC3
<---------
RVE1(1)
------>
GLK1(2)
=======================
MYC_MYB
------->
MYC2
<---------
ARR11(3)
------
GLK1(2)
--------->
TOE1(2)
--------->
ANAC58
<---------
ARR11(3)
--------->
ARR11(3)
aatccacacaagtgaaactaaaacaatccaacgatgtaaacaacctcacaatccacgtggacgttcaagatcacacatgcactagcttcagatattaaga
1539400
<---------
WOX13(1)
--------->
ATHB12
--------->
HSFB2a(2)
<---------
HSFB2a(2)
<---------
LBD16
-
--------->
ARR14(2)
<--
<---------
ARR14(2)
----
----------------->
AGL1
-----
<----------
ID1
<---------
YAB1
<-----
----------->
GT1
--------->
GLK1(2)
--------->
At4g35610
<------
<---------
AHL20(2)
----------->
GT1
<---------
At4g35610
<------
--------->
AHL20(2)
---------->
DOF2
--------->
At4g35610
<------
---
YAB1
---------->
DOF2
----------->
GT1
--------->
DAG2
---------->
DOF2
--------->
ARR14(2)
gtgaaacaaaataaaaggaagaaataaatcgaaaaaatggaaaaaagtgacaaatctggaaagctgattggctgaagtcgtccatgtattcaagtttcgc
1539500
<------------------------
ANAC81
--------->
REM1(1)
<---------
ALFIN1
---------->
RAV1(1)
----
NtERF2
----->
LBD16
---->
ANAC46
----
LBD16
<----------
DOF2
-----
---
ANAC46
<---------
ARR11(3)
------
---
ANAC58
--------->
ARR11(3)
---------
---
ANAC58
<-----------
GT1
<---------
CCA1(2)
<----------
DOF2
--------->
AHL20(2)
ggcaacacctctcttctcatttttctcattccctaattcttctatatctctctctctttctctcacttcctttttttttttgtttttaaacaaataataa
1539600
<----------
DOF2
<---------
DAG2
------>
ZmHOX2a(2)
------>
ZmHOX2a(1)
<-----------
GT1
<----------
DOF2
<-----------
GT1
--------->
ARR11(3)
---->
GLK1(2)
--------->
TOE1(3)
--------->
AHL20(1)
<------
--->
YAB1
--------->
TOE2(3)
<---------
ARR11(3)
---------->
DOF2
>
YAB1
<<<<<<<<<
TBF1
*
TSS
<---------
AHL20(1)
--------->
MYB52(1)
tctttctttcttcttccttaatttgccttctctctctctaaaaccctt
gtttcaaatattttctcatcgatctctttttgaaactaaaggctcgagcttt
1539700
--------->
GLK1(1)
<---------
GLK1(1)
<---------
ARR14(2)
<---------
SPL7
<---------
MYB46(3)
<---------
DEAR3(2)
<---------
At4g35610
--------->
MYB55(2)
<---------
GLK1(1)
<---------
AtMYB61
<--------
P
<---------
MYB52(1)
<---------
MYB46(3)
-------->
P
<---------
CCA1(2)
<---------
WOX13(1)
--------->
MYB52(1)
------>
MYB83
<---------
ARR14(2)
------>
MYB46(1)
------>
MYB46(1)
------>
ZmHOX2a(2)
------>
MYB83
<---------
MYB52(1)
<---------
MYB59
<---------
ARR11(3)
<---------
ALFIN1
<---------
ANAC55(2)
--------->
MYB55(1)
--------->
ANAC55(2)
--------->
MYB46(3)
<---------
At4g35610
<---------
ABI4(2)
<-----------
HVH21
--------->
ARR14(2)
<---------
MYB55(2)
--------->
ANAC46
<---------
AGP1
<---------
TOE1(3)
--------->
DEAR3(2)
<---------
ARR14(2)
--------->
ANAC58
--------->
ARR11(3)
<----------
DOF2
--------->
ALFIN1
--------->
ANAC58
--------->
MYB52(2)
<---------
TOE2(3)
----
DOF2
--------->
PCF2
<---------
ANAC46
<-----------
GT1
<---------
MYB46(2)
--------->
At4g35610
----
ctctatctctctttcgaacccaccggtggttcgggtatctctctattcactcttcaagtcacctaattg
gttagtggatctgcttcgattagggttttta
1539800
<---------
AHL20(2)
<---------
RVE1(1)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ANAC58
<---------
GLK1(2)
<---------
ANAC58
--------->
LBD16
<----------
DOF2
<---------
DAG2
--------->
LBD16
<---------
DAG2
<----------
DOF2
<---------
LBD16
--------->
ZAT6
---------->
ID1
--------->
HSFB2a(2)
<-----------
GT1
<----------
DOF2
<---------
LBD16
<----------
DOF2
<--
------>
DOF2
<-----------
GT1
<-----------
GT1
<-----------
GT1
<---------
GLK1(2)
<------
aaaggcttttcctttttccgtttcaaattttttcttctttcgactctcaaaattttcccggattttttttttggattctttaacactttctgtgttagct
1539900
----------->
RAV1(2)
<---------
At4g35610
<---------
ZAT2
--------->
At4g35610
--------->
ZAT2
<-----------
RAV1(2)
<---------
ZAT18
<---------
MYB52(1)
<------
MYB46(1)
--------->
ZAT18
<---------
ANAC58
<------
MYB83
--------->
At4g35610
<---------
ANAC46
<---------
MYB46(3)
<----------
DOF2
<---------
ANAC58
<---------
ANAC46
<---------
At4g35610
--------
DOF2
--------->
ARR14(2)
<---------
TOE2(3)
<---------
HSFB2a(2)
<------
ZmHOX2a(1)
---
At4g35610
<---------
GLK1(1)
<---------
TOE1(3)
--------->
HSFB2a(2)
<---------
TOE2(3)
ctttttcttttgactcgagttccgttttttctcagctgaggtttagtgggtatttttggaagctcactcgattgaagttttttttttttttttgaggaat
1540000
<---------
ARR14(2)
--------->
ARR14(2)
--------->
GLK1(2)
<-----------
ARR10
<---------
GLK1(2)
<---------
AHL20(2)
<---------
GLK1(2)
<----------
DOF2
--------->
ARR14(2)
<---------
AHL20(2)
--------->
ARR14(2)
<---------
AHL20(2)
<---------
ARR14(2)
--------->
AHL20(2)
<---------
ARR14(2)
--------->
AHL20(2)
<---------
HSFC1(2)
<-----------
GT1
<----------
cagtttcagatttgtagaatctgcgttttatttatatttataggttagcgattgaagtttcgaattcgattttgttttactatctgaaatttaaacaatt
1540100
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AGI:
At3g05380.1
Description:
DNA binding / transcription factor. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G27610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17588.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain DIRP (InterPro:IPR010561); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778)
Range:
from: 1539649
to: 1546475
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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