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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-------
TEIL
<-
<---------------------
WRI1
--------->
LBD16
-------->
ATHB1
------>
MYB46(1)
<---------
ANAC58
--------------->
AtSPL8
--
------>
MYB83
<---------
ANAC46
---------->
DOF2
--------->
ATHB12
--------->
DREB2C(2)
<---------
GLK1(1)
<---------
WRKY45
--------->
ATHB51
--------->
DEAR3(1)
--------->
GLK1(1)
------->
TEIL
<---------
ARR11(3)
<---------
ICU4
---->
HSFB2a(2)
---------->
DOF2
<---------
ANAC58
--------->
GLK1(2)
<---------
YAB1
-----
HSFB2a(2)
<-----------
HVH21
<---------
LBD16
--------->
ARR11(3)
--------->
ICU4
aaaaaacaccgactacgcttcacagaaagaaatccattttgcggatgcattttgagaaaaatctttagtcaaagtactactatttagaattattgcattt
1479100
------>
ZmHOX2a(2)
--------->
GLK1(1)
<------
ZmHOX2a(2)
<---------
GLK1(1)
<-----------
ARR10
--------->
ARR14(2)
------->
TEIL
<---------
AGP1
--------->
ARR11(3)
<---------
ARR14(2)
<---------
ARR11(3)
<---------
CCA1(2)
--------->
RAP2.6(2)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC55(2)
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC58
--------->
ANAC55(1)
-------->
ZAP1
--------->
ANAC58
<---------
AHL20(2)
--------->
MYB46(3)
<---------
LBD16
--------->
AHL20(2)
<---------
At5g28300
--------->
MYB52(1)
<---------
YAB1
<---------
WRKY18(1)
----------->
HVH21
--------->
AHL20(2)
--------->
ATHB51
<-----------
HVH21
<---------
AHL20(1)
-------->
ATHB1
--------->
O2
--------->
AHL20(1)
--------->
ATHB12
<---------
At4g35610
<---------
AHL20(2)
--------->
ICU4
--------->
At4g35610
--------->
AHL20(2)
<---------
AHL20(2)
--------->
bZIP60(2)
---------->
DOF2
<---------
YAB1
--------->
MYB59
--------
HSFB2a(2)
----------->
GT1
--------->
AHL20(1)
<-----------
HVH21
------->
HSFB2a(2)
--------->
AtLEC2
<---------
ATHB51
----------------------->
TaNAC69(2)
--
tccaaaagaaataatataatttcatgcaaaattggttatatatgaaaattattgaccgccactaggtctccagtcaggtcacggatctcatcgtgtatga
1479200
--------->
ZAT6
<---------
TOE2(3)
--------->
AHL20(2)
<-----------
GT1
--------->
KAN4(2)
<---------
TOE1(3)
<---------
MYB52(1)
<---------
YAB1
<------
ZmHOX2a(1)
--------->
ICU4
------->
TEIL
<---------
AHL20(2)
--------->
YAB1
<---------
HSFB2a(2)
<---------
AHL20(2)
--------->
ANAC55(2)
<-----------
GT1
<---------
YAB1
--------->
HSFB2a(2)
--------->
AHL20(2)
--------->
CCA1(2)
--------->
AHL20(2)
<---
------->
YAB1
--------->
AtLEC2
--------->
TOE2(3)
--------->
MYB52(1)
------->
TEIL
<-------
GAMYB
attatcatgagtcaatttccatccagaaggattatcccttaaaataaatattagttaagggatatatgtaactctatgcatttatttcgctccgttatat
1479300
<---------
ARR11(3)
<---------
GLK1(2)
---------
--------->
ZAT6
<---------
ZAT18
------->
TEIL
--------->
ZAT18
--------->
ANAC55(2)
<---------
ANAC46
<---------
ANAC46
<---------
ARR14(2)
--------->
YAB1
--------
GT1
--------->
ARR14(2)
<----------
DOF2
<-----------
HVH21
tacatgctgtgtaatcacatgtatgatgtaatctatgcatatatgtaactctagatactttagacaattggatgaagactgtcatagtgtgcaaaaatac
1479400
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
------->
MYC4
<-------
MYC3
------->
MYC2
------->
MYC3
<-------
MYC4
<-------
MYC2
--------->
ANAC55(2)
<---------
ANAC55(2)
<---------
TGA1a
<--------
ABF1
--------->
TGA1a
================================================
bZIP_DOF
<---------
ANAC46
--------->
O2
--------->
O2
<---------
O2
<---------
AHL20(2)
<---------
ANAC58
--------->
TOE1(3)
<---------
YAB1
--------
<---------
ANAC58
--------->
YAB1
--------->
ANAC55(2)
<---------
ICU4
<---------
ANAC58
<---------
AHL20(2)
<---------
O2
--------->
TOE2(3)
--------->
ANAC55(2)
<---------
ANAC58
>
YAB1
---------->
ID1
--------->
YAB1
<-----------
GT1
<-----------
GT1
<----------
DOF2
--
tggttttaatttgttttgtcgtctcgtctcgtctataatcttaagacacgtgttacgttgtatcaaatttacataattaatgggctttaggcttgaacaa
1479500
-
---------->
DOF2
---------
----------->
GT1
<--------
---------->
DOF2
<---------
ATHB12
--------->
LBD16
--------->
WOX13(1)
----------->
RAV1(1)
<---------
HSFB2a(2)
<-------
TEIL
<--
--------->
PCF2
--------->
LBD16
--------->
GLK1(2)
--
<-----------
TCP11(1)
<---------
LBD16
--------->
GLK1(1)
<---
---->
CBF
---------->
DOF2
*
TSS
<---------
LBD16
<---------
HSFB2a(2)
<---
-------->
DOF2
----------->
GT1
<------
ZmHOX2a(1)
--------->
HSFB2a(2)
<---------
LBD16
<---------
ATHB12
ttaaggcccacaaaagcctgttaatcccatgggaagttgagga
cgagaaacagagtccgggaaaagaaaaaagagctctcggagattcaatcactc
atgg
1479600
<---------
ANAC58
<---------
ANAC58
<------
MYB83
------>
MYB83
<------
MYB46(1)
------>
MYB46(1)
<---------
WOX13(1)
----------->
RAV1(1)
--------->
ATHB12
--------->
MYB52(1)
<---------
YAB1
--------->
LBD16
------>
ZmHOX2a(2)
-------->
SPL7
<---------
HSFB2a(2)
===============================
>
YAB1
------>
NtERF2
--------->
HSFB2a(2)
<---------
WOX13(1)
<------
ZmHOX2a(2)
<-----
-
ICU4
--------->
DEAR3(1)
--------->
At4g35610
================================
-------
SPL7
--------->
GLK1(1)
--------->
MYB46(3)
<---------
ARR14(2)
<--------
------->
MYB52(1)
<---------
GLK1(1)
--------->
AtMYB61
<---------
ARR11(3)
<--------
------
ANAC58
--------->
At5g28300
<---------
ZAT14
--------->
HSFB2a(2)
--------->
ARR11(3)
--------->
SPL7
------
ANAC58
<---------
DEAR3(1)
--------->
ZAT18
<---------
HSFB2a(2)
--------->
ARR14(2)
<---------
SPL7
cgaacgaagacgacgacggtgagaaatccagaagtctgcaccaacagattgctagaaaacccaaaacccagatcgtgattggtgtgccatcgtaccagga
1479700
<---------
CCA1(2)
--------
<---------
ALFIN1
========
------>
NtERF2
<-------
--------->
ZAT18
<---------
ALFIN1
--------
<---------
At4g35610
------>
NtERF2
<-------
---------->
DOF2
--------->
ANAC58
-----------
<---------
HSFB2a(2)
--------->
ANAC46
--------->
SPL7
--------->
HSFB2a(2)
--------->
ANAC58
<-----------
HVH21
=
HOX2a_HOX2a
<---------
ALFIN1
<-----------
HVH21
-
ZmHOX2a(1)
--------->
ZAT18
<----------
DOF2
<---------
TOE1(1)
=
HOX2a_HOX2a
<---------
ZAT18
--------->
ANAC58
==========================
-
LBD16
--------->
At4g35610
<---------
ATERF1(1)
--------->
LBD16
================================
---
RAV1(2)
<---------
WRKY38(1)
--------->
ANAC58
<----------
DOF2
<---------
SPL7
agttttggaaagctcacagacgaagtccacgcctccatctctcttcaagccttcccagagtttctctcaggctttcgctttcgtcaagtcgtccgacgtc
1479800
<---------
ATERF1(1)
------>
NtERF2
--------->
RAP2.3(2)
--------->
RAP2.3(3)
--------->
DEAR3(1)
--------->
RAP2.6(2)
--------->
RAP2.3(1)
--------->
MYB46(3)
--------->
ERF1
------>
NtERF2
--------->
ZAT2
<---------
ATERF1(1)
<---------
ZAT2
--------->
ZAT2
--------->
At4g35610
<---------
ZAT2
=====================
RAV
--------->
At4g35610
<----------
DOF2
<---------
At4g35610
<---------
DEAR3(1)
<---------
At4g35610
<---------
ZAT18
--------->
LBD16
--------->
SPL7
--------->
At4g35610
<------
NtERF2
<---------
At4g35610
--------->
ANAC46
<---------
MYB52(1)
<---------
LBD16
--------->
ATERF1(1)
->
O2
------>
ZmHOX2a(1)
--------->
ALFIN1
=================================
MYC_MYB
<---------
RAP2.6(3)
--
O2
------>
ZmHOX2a(1)
--------->
ERF1
<-----------
HVH21
<---------
ALFIN1
->
TGA1a
<---------
ALFIN1
------->
GAMYB
--------->
DEAR3(1)
----------->
RAV1(1)
--
TGA1a
------>
ZmHOX2a(1)
--------->
ATERF1(1)
<---------
SPL7
<---------
TOE1(2)
<---------
AHL20(2)
>
HVH21
<---------
ALFIN1
--------->
DEAR3(1)
--------->
ZAT2
<-----------
RAV1(2)
<---------
AHL20(1)
==
bZIP_DOF
------>
ZmHOX2a(1)
<---------
At4g35610
--------->
PCF2
--------->
AHL20(1)
==
bZIP_DOF
------>
ZmHOX2a(1)
<------
NtERF2
--------->
At4g35610
--------->
ZAT18
----------->
GT1
--
tactctcctcctcctccttcctccgcagccgcctcttcttctcagccgtcgggcgcttctcaggtgccccacagttcaag
gtgttatatatttgtttgac
1479900
---
-----
-----
------
--------->
HSFB2a(1)
<-------
--------->
LBD16
<---------
--------->
ARR14(2)
--------->
ZAT14
<---------
ARR14(2)
<-----------
GT1
<---------
------>
P
<---------
TOE2(3)
<---------
GLK1(1)
<---------
ICU4
<---------
ZAT14
ttacctttggaattacaaagtttagattagtttgatgaaattagtgctgcaattccgaacatttctactgatttttaccattcttctgcagtgatggtac
1480000
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AGI:
At3g05210.1
Description:
ERCC1 (UV REPAIR DEFICIENT 7). Identical to DNA excision repair protein ERCC-1 (ERCC1) [Arabidopsis Thaliana] (GB:Q9MA98); similar to unnamed protein product [Vitis vinifera] (GB:CAO17655.1); contains InterPro domain RuvA domain 2-like (InterPro:IPR010994); contains InterPro domain Helix-hairpin-helix DNA-binding, class 1; (InterPro:IPR003583); contains InterPro domain Helix-hairpin-helix motif; (InterPro:IPR000445); contains InterPro domain DNA repair protein rad10; (InterPro:IPR004579)
Range:
from: 1479544
to: 1482048
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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