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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                   <---------AHL20(2)
                              <---------AHL20(2)
                        ------------------------>ANAC81
                ---------->DOF2    --------->AHL20(1)                                    <---------ANAC55(2)
               --------->AtMYB61   --------->AHL20(2)               <----------DOF2      <---------ANAC55(1)
            <----------ID1    --------->AHL20(2)                 <-----------GT1         --------->ANAC55(2)
-GT1 ----------->GT1   --------->MYB52(1)---------->DOF2<---------MYB52(1)  ---------->DOF2    -----
 
cattgtaagtgtaaaacaccaaagcacaacgaataaaataaaataaaagtttcttagccgtttgtgtttttcttttcccaaaagtttatattaagtgtca  1360500
                      --------->ZAT2
                      <---------ZAT2
                      ----------->RAV1(2)
                      --------->At4g35610
      <---------AHL20(2)                               <-----------HVH21          ----------->GT1
   ----------->GT1    <---------At4g35610--------->ARR14(2)                ----------->HVH21       <
----->DOF2<---------ICU4                 <---------ARR14(2)     <---------ZAT6    <---------MYB46(3)
 
aagtacaagttaattagttctaatcagctgaacacaactatacatatacacattaaactgtcatttagtcttaagtgtttgacattggttaattctaact  1360600
                                                                    --------->ALFIN1
                                                                    <------NtERF2
                                                                  <---------ANAC46
                                                                  <---------ANAC58
                                                                  <---------O2
                                                                  <---------TGA1a
                                                                  <---------bZIP60(2)
                                                                  --------->O2
                                                                  <---------ANAC58
                                                                  =======================bZIP_DOF
                                                             ============================bZIP_DOF
                                                             <---------O2
                                                             --------->O2
                                                             <---------TGA1a
                                                             ============================bZIP_DOF
                         ------->TEIL                        --------->TGA1a             --------->MYB46(3)
                     <---------TOE2(3)              --------->AHL20(1)               --------->DOF5.7(2)
                    --------->YAB1             ----------->GT1   <------NtERF2      <----------DOF2
                   --------->ICU4        <---------------AtSPL8  <-----------------------TaNAC69(2)
                 --------->TOE2(3)   <---------ZAT6 --------->ARR11(3)        ---------->DOF2
---------ICU4 <---------TOE1(2)    <---------ANAC46 <---------AHL20(1) <---------ANAC46 >>>>>>>>>>>>
 
caaaattgctgaattcgtagcattaatgaaccccagttttgtgttatgtacagaaaatattgactcgtggcgtgggggaaacaaagactttaaccaatgt  1360700
                                             <---------ZAT18                                       -
             ----------->HVH21              --------->ALFIN1                                       -
         <---------ANAC58                <-----------RAV1(2)                                       -
   <---------YAB1              --------->AHL20(2)                                                ---
 --------->YAB1                --------->AHL20(1)                               --------->WOX13(1)--
<---------ATHB12--------->ZAT6 <---------AHL20(1)                <---------TOE1(2)      --------->TOE1(2)
>>>>>LFY <---------ANAC58     <---------AHL20(2)             <-----------GT1  <---------YAB1   >>>>>
 
ccaatgacaattgtttgtgacactaggctataaatattttaggcccagtgggcttcgttttattttcccatgtaaatgtttattaatcaaacctagaaaa  1360800
             <---------ANAC55(2)
--------->RAP2.6(3)                                                                    *TSS
----->MYB83  --------->ANAC55(2)                                                      <---------AHL20(2)
----->MYB46(1)                                                                      ----------->TBP
-------->MYB52(1)                    ------>NtERF2                             <-----------GT1
------>AtMYB61              ---------->DOF2                                 ----------->GT1
------->MYB55(1)          <---------AHL20(2)             ---------->DOF2--------->ARR11(3)      ----
>>>>MYB2<------ZmHOX2a(1) --------->AHL20(2) ---------->DOF2           <------ZmHOX2a(1)---------->DOF2
 
ccaaacggctaggattaagtaagcccaaattaaaagttgaggcccatacaaagagaacacaaaagaaaccctaaggaacttgtaactatataaaagctcc  1360900
                                          --------->ANAC58
                                  --------->ANAC58
                                  --------->ANAC58
                                 --------->SPL7             <----------DOF2
                                ------>NtERF2            --------->AGP1
                               <---------SPL7            <---------ARR11(3)
                      <---------ALFIN1    --------->ANAC46 ------>ZmHOX2a(2)
                    <-----------HVH21     --------->ANAC58<------ZmHOX2a(2)
               <----------DOF2 --------->ZAT18           --------->ARR11(3)
           <------NtERF2<---------At4g35610             <---------GLK1(1)
           <---------CCA1(2) <---------At4g35610        --------->GLK1(1)
          ------>NtERF2 ----------->RAV1(2)            ----------->ARR10                 <---------ICU4
      <---------DEAR3(1)--------->At4g35610     <---------ANAC58                <---------REM1(1)
-->NtERF2<---------DEAR3(1)  --------->At4g35610<---------ANAC58  <----------DOF2  ----------->GT1--
 
gacttcgattcggcgtctctttccttcacctgagcggacgaaaacactcaagcttgcagagatctttcactttaatccttgagaagtagcaaaaatggct  1361000
                                                                           <---------YAB1
                                     --------->MYB46(3)                   <---------AHL20(1)
                                    ------>MYB83                         --------->ATHB51
                                    ------>MYB46(1)                      --------->AHL20(2)
                                   ----------->RAV1(1)         <---------MYB52(1)
            ------>MYB83           --------->MYB52(1)        <---------ANAC58
            ------>MYB46(1) --------->YAB1                   <---------ANAC58    <-----------GT1
          --------->AtMYB61<-------TEIL                    <---------ARR14(2)<---------AHL20(2)
     <-----------HVH21<------ZmHOX2a(1)          <---------LBD16  --------->GLK1(1)                <
--------->DAG2     <-----------RAV1(2)------->GAMYB <------ZmHOX2a(1)   <---------MYB52(1)  <-------
-------->DOF2      ============================RAV--------->LBD16--------->MYB52(2)         --------
 
gaaaaggcggtcaccatccgaaccaggaaattcatgaccaacagacttctctccaggaagcagttcgtgagttccattattttttttctcttctctatct  1361100
                                           --------->YAB1
    <---------YAB1                      ----------->GT1
---------CCA1(2)                    <---------ARR14(2)     --------->ANAC58                        <
--ARR14(2)                          --------->GLK1(2)     ------->TEIL                            --
->ARR14(2)---------->ID1   <---------AHL20(2)<---------YAB1--------->ANAC58        <---------MYB52(1)
 
gcatatcatttttgttcttctgggttttgttttaatgggaatctagttataatttgatatgaacccaatctcgagagaatgcattcgttgtctcgtcaaa  1361200
                                                      ---------->DOF2
                                                   --------->TOE2(3)
   --------->ATHB51                               <---------ZAT6                          ------>ZmHOX2a(2)
   --------->ATHB12                     <-----------GT1                                  <---------At4g35610
  <---------YAB1               <----------DOF2  ------>MYB46(1)                         --------->ARR11(3)
  <---------AHL20(2)      <-----------RAV1(2)   ------>MYB83               <------ZmHOX2a(2)
--------->YAB1          <-----------HVH21     <---------MYB59             <---------ARR11(3)
---------YAB1  <---------TOE2(3)      --------->CCA1(2)                   --------->ARR11(3)    <---
------->AHL20(2)      --------->MYB59--------->ARR14(2)            <---------ZAT6       <---------AGP1
 
tttttataattggggtttgatgttttaggtcaggctttcagatttacgacctaatgttaaagcatagatagtgtttagatcatatagtattgatctggcg  1361300
                --------->GLK1(2)
               --------->ARR11(3)
               <---------ARR11(3)
             <---------TOE2(3)
       <---------ANAC46                        <---------MYB46(3)                            <------
       <---------ANAC58                <---------AtMYB61                         --------->LBD16
       <---------ANAC58                <---------YAB1      <---------TOE2(3)    <---------LBD16
---NtERF2<---------MYB52(1)  --------->GLK1(2) ----------->GT1      <---------TOE2(3)   >>>>>>>>>>>>
 
caatttagttccgtttgagattttggaatgaaattctaagttatggtggattgttgaaaatataggttattgatgttcttcaccctggaagagccaatgt  1361400
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AGI:  At3g04920.1   
Description:  40S ribosomal protein S24 (RPS24A). Identical to 40S ribosomal protein S24-1 (RPS24A) [Arabidopsis Thaliana] (GB:Q9SS17); similar to 40S ribosomal protein S24 (RPS24B) [Arabidopsis thaliana] (TAIR:AT5G28060.1); similar to ribosomal protein S19 (GB:1909359A); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Ribosomal protein S24e; (InterPro:IPR001976)
Range:  from: 1360888    to: 1362301    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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