Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
----
--------->
AHL20(1)
--------->
AHL20(1)
------
----------->
GT1
<-----------
RAV1(1)
---------
--------->
ALFIN1
<---------
AHL20(2)
<---------
AHL20(1)
<--------
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
REM1(1)
--------->
AHL20(2)
<---------
TOE2(3)
<-----------
RAV1(1)
--------->
ARR11(3)
<---------
AHL20(2)
--
ZmHOX2a(1)
---------->
DOF2
--------->
AHL20(2)
--------->
ARR11(3)
<----------
DOF2
----
--
LBD16
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
DAG2
------
atttatggatttatttcataaaagtgttgcaaaaatatatatatatagatgttgccaaacaaaaatattgttttgggtctcagcctttttaaatacacca
1342300
-------->
P
<---------
MYB52(2)
<---------
AHL20(2)
<------
NtERF2
-->
MYB83
<---------
At4g35610
--->
MYB46(3)
<---------
ANAC58
--------->
At4g35610
>
ANAC46
<---------
ANAC58
<---------
YAB1
------>
NtERF2
--------->
GLK1(2)
---
GT1
<---------
ICU4
------->
GAMYB
<---------
DEAR3(1)
-->
MYB46(1)
<---------
YAB1
--------->
MYB52(1)
<---------
RAP2.6(2)
--->
AtMYB61
<---------
GLK1(2)
<---------
KAN4(2)
<---------
RAP2.3(2)
gcccatatttgattcggattatcatttcttgagacttaacaacgaataaccgagattatagcctaaacgttttaggcggctaaccagagaatcaatttct
1342400
<---------
AHL20(2)
<---------
HSFB2a(1)
<----------
DOF2
---------->
DOF2
--------->
AHL20(2)
----------->
GT1
<------
ZmHOX2a(1)
<---------
AHL20(2)
----------->
GT1
--------->
MYB59
<---------
YAB1
--------->
DAG2
--------->
DAG2
<---------
GLK1(2)
---------->
DOF2
<----------
DOF2
---------->
DOF2
--------->
YAB1
------
atgtctctcaactcaagtgaaaagttaaaactctttctttcgaacataaactaaaaggttaggaaagctcgaatcagattattaatttttggtaatgtga
1342500
------>
MYB46(1)
------>
MYB83
<---------
MYB59
----------->
GT1
--------------->
AtSPL8
<---------
MYB46(2)
---------->
DOF2
<---------------
AGL15
--------->
ANAC46
--->
ZAT18
<----------
DOF2
<-----------
GT1
--------->
ANAC55(2)
XXXX
actaaaagtttagtaaaaaatcgtttcaatctttttcttatctaagtaccatctaaaatgggtttaggctcaattcttcacctaatttcatttcgaatag
1342600
--------->
ZAT14
<---------
ZAT14
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
<---------
MYB46(3)
----------->
GT1
<---------
ZAT18
<---------
ALFIN1
--------->
ANAC58
<----------
ID1
--------->
ZAT18
--------->
At4g35610
--------->
ANAC58
---------->
DOF2
---------->
DOF2
<-------
GAMYB
<------
ZmHOX2a(1)
<-------
XXXXXXXXXXXXXXXX>
MIR823
<------------
CBF
--------->
ZAT14
----------->
RAV1(1)
---------->
DOF2
gttttgatcatataaaaaagaaaaaaaattggttaagcgcactgaagacagttgttagcaccacagagttttatgaggagagaaagcatcatacatcatc
1342700
--------->
YAB1
<-----------
GT1
<---------
YAB1
<---------
DAG2
--------->
YAB1
<---------
ICU4
<---------
YAB1
--------->
ICU4
<---------
AHL20(2)
<---------
ICU4
--------->
AHL20(2)
*
TSS
--------->
ATHB12
<----------
DOF2
----------->
GT1
--
ICU4
<------------
CBF
<----------
DOF2
------>
ZmHOX2a(1)
---------->
DOF2
<------
acaaacaagtttcttcatcgctc
attgttagtcattagtactttacttcttccttcttcctcttttattataagaagagaaagaaaaaaacatcatcttt
1342800
--------->
ZAT2
<---------
At4g35610
<---------
ANAC58
<---------
ZAT2
<---------
WOX13(1)
--------->
At4g35610
<---------
ANAC58
----------->
RAV1(2)
<---------
ANAC58
<------
NtERF2
--------->
ATHB12
--------->
At5g28300
<---------
MYB52(1)
--------->
LBD16
<---------
At4g35610
--------->
ANAC46
------>
ZmHOX2a(1)
<---------
CCA1(2)
<---------
ANAC58
<---------
LBD16
<---------
MYB52(1)
----
DOF2
--------->
MYB52(1)
--------->
At4g35610
<---------
REM1(2)
--------->
ARR14(2)
tttttcttgaataacagagcgattgctcttatctcagttgattggcc
atggcttcttcagtcgtcttcgcggcaactgggtctctctccgttcctccatt
1342900
------>
MYB83
------>
MYB46(1)
<---------
MYB59
--------->
At5g28300
<---------
TOE1(3)
--------->
TOE2(3)
--------->
DOF5.7(2)
--------->
YAB1
<---------
ZAT6
<-----------
GT1
--------->
GLK1(2)
--------->
TGA1a
>>>>>>>>>
GT-2
<---------
GLK1(2)
=====================
MYC_MYB
--------->
GLK1(1)
<---------
ETT(1)
----------->
GT1
--------->
HSFB2a(1)
--------->
HSFC1(2)
<---------
DOF5.7(2)
<---------
<---------
ANAC46
--------->
ANAC46
--------->
ANAC46
------->
GAMYB
<----------
DOF2
<---------
LBD16
--------->
ZAT14
<---------
HSFC1(2)
--------->
MYB52(1)
--------->
DAG2
gaagtctcggagattctatgttaattcttcactcgactccgatgtttccgacatgagtgttaacg
gtaattaaccaaacaaaaattgaattctttactgt
1343000
<---------
ANAC46
<----------
DOF2
--------->
GLK1(2)
<-------
TEIL
<---------
GLK1(2)
<--------
P
<---------
ARR14(2)
<-----------
RAV1(2)
--------->
ARR14(2)
<---------
MYB52(1)
<---------
ANAC46
--------->
At5g28300
<-----------
HVH21
<---------
LBD16
----------->
GT1
-----------
--------->
ANAC46
--------->
HSFC1(2)
--------->
GLK1(2)
<---------
ZAT6
------>
ZmHOX2a(1)
--------------------->
WRI1
<----------
DOF2
<----------
DOF2
--
GT1
<-----------
TGA1
<---------
HSFC1(2)
<---------
GLK1(2)
---------->
ID1
ctcctctgcgtcaggttgattcctttggatgtttcggattctgggtatttcaattggattctttagaaaatcggtaaattttgtctttttagtggaaaat
1343100
<---------
DAG2
--------->
HSFB2a(1)
--------->
MYB46(3)
<---------
KAN4(1)
--------->
ANAC58
--------->
ANAC58
<---------
DAG2
--------->
KAN4(2)
<----------
DOF2
<---------
ALFIN1
<---------
YAB1
---------->
DOF2
<---------
MYB52(2)
<------
ZmHOX2a(1)
>
GT1
<------
ZmHOX2a(1)
--------->
ANAC46
<----------
DOF2
<---------
YAB1
-
ttgagaaattgacatgtactaggattaaaaggcttagctttatgccacgaacaatcccacttttgaagaggatgatgtttcaattctcatggcatattga
1343200
Previous
Next
AGI:
At3g04870.1
Description:
ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase. Identical to Zeta-carotene desaturase, chloroplast/chromoplast precursor (ZDS1) [Arabidopsis Thaliana] (GB:Q38893;GB:Q93YN2;GB:Q9CAV3;GB:Q9LLY1); similar to PDS3 (PHYTOENE DESATURASE) [Arabidopsis thaliana] (TAIR:AT4G14210.1); similar to zeta-carotene desaturase [Citrus unshiu] (GB:ABC33728.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43021.1); similar to zeta-carotene desaturase [Citrus unshiu] (GB:BAB68552.1); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Amine oxidase; (InterPro:IPR002937); contains InterPro domain C
Range:
from: 1342724
to: 1346393
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version