Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->AHL20(2)                                    <---------AHL20(2)                                    --------->AHL20(2)                                  --------->AHL20(2)                                 <---------AHL20(1)                                              ----                                 --------->AHL20(1)          --------->AHL20(1)                ------                        ----------->GT1       <-----------RAV1(1)                           ---------                     --------->ALFIN1 <---------AHL20(2)     <---------AHL20(1)             <--------       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------REM1(1)                       --------->AHL20(2)  <---------TOE2(3)  <-----------RAV1(1)     --------->ARR11(3)                       <---------AHL20(2) --ZmHOX2a(1)    ---------->DOF2--------->AHL20(2)           --------->ARR11(3)   <----------DOF2---- --LBD16<---------AHL20(2)    --------->AHL20(2)            --------->YAB1       <---------DAG2------   atttatggatttatttcataaaagtgttgcaaaaatatatatatatagatgttgccaaacaaaaatattgttttgggtctcagcctttttaaatacacca  1342300                                                                               -------->P                                                                            <---------MYB52(2)      <---------AHL20(2)                                                   <------NtERF2 -->MYB83                                                                  <---------At4g35610 --->MYB46(3)           <---------ANAC58                                   --------->At4g35610 >ANAC46                <---------ANAC58            <---------YAB1        ------>NtERF2--------->GLK1(2) ---GT1            <---------ICU4              ------->GAMYB             <---------DEAR3(1) -->MYB46(1)      <---------YAB1            --------->MYB52(1)           <---------RAP2.6(2) --->AtMYB61  <---------GLK1(2)           <---------KAN4(2)              <---------RAP2.3(2)   gcccatatttgattcggattatcatttcttgagacttaacaacgaataaccgagattatagcctaaacgttttaggcggctaaccagagaatcaatttct  1342400                                                                                <---------AHL20(2)                                                              <---------HSFB2a(1)                              <----------DOF2               ---------->DOF2    --------->AHL20(2)                    ----------->GT1                        <------ZmHOX2a(1)   <---------AHL20(2)                   ----------->GT1                       --------->MYB59      <---------YAB1                  --------->DAG2                    --------->DAG2        <---------GLK1(2)                 ---------->DOF2  <----------DOF2 ---------->DOF2      --------->YAB1          ------   atgtctctcaactcaagtgaaaagttaaaactctttctttcgaacataaactaaaaggttaggaaagctcgaatcagattattaatttttggtaatgtga  1342500                                                                                ------>MYB46(1)                                                                                ------>MYB83                                                                              <---------MYB59        ----------->GT1                 --------------->AtSPL8                <---------MYB46(2) ---------->DOF2                  <---------------AGL15                      --------->ANAC46 --->ZAT18                  <----------DOF2<-----------GT1                   --------->ANAC55(2) XXXX   actaaaagtttagtaaaaaatcgtttcaatctttttcttatctaagtaccatctaaaatgggtttaggctcaattcttcacctaatttcatttcgaatag  1342600                                   --------->ZAT14                                   <---------ZAT14                      <---------AHL20(2)                      --------->AHL20(2)                      --------->AHL20(1)                     --------->AHL20(2)          <---------MYB46(3)               ----------->GT1     <---------ZAT18        <---------ALFIN1       --------->ANAC58               <----------ID1      --------->ZAT18    --------->At4g35610        --------->ANAC58             ---------->DOF2  ---------->DOF2  <-------GAMYB              <------ZmHOX2a(1)  <------- XXXXXXXXXXXXXXXX>MIR823<------------CBF--------->ZAT14   ----------->RAV1(1)  ---------->DOF2   gttttgatcatataaaaaagaaaaaaaattggttaagcgcactgaagacagttgttagcaccacagagttttatgaggagagaaagcatcatacatcatc  1342700                                                                    --------->YAB1                                        <-----------GT1            <---------YAB1                                      <---------DAG2             --------->YAB1                                <---------ICU4                  <---------YAB1                               --------->ICU4                <---------AHL20(2)                             <---------ICU4                  --------->AHL20(2)                        *TSS --------->ATHB12              <----------DOF2    ----------->GT1 --ICU4             <------------CBF  <----------DOF2    ------>ZmHOX2a(1)  ---------->DOF2   <------   acaaacaagtttcttcatcgctcattgttagtcattagtactttacttcttccttcttcctcttttattataagaagagaaagaaaaaaacatcatcttt  1342800                                                                       --------->ZAT2                                                                       <---------At4g35610                                                <---------ANAC58       <---------ZAT2                                      <---------WOX13(1)               --------->At4g35610                                     <---------ANAC58                  ----------->RAV1(2)                                     <---------ANAC58               <------NtERF2                                    --------->ATHB12                --------->At5g28300                                  <---------MYB52(1)               --------->LBD16                                 <---------At4g35610              --------->ANAC46         ------>ZmHOX2a(1)                          <---------CCA1(2)     <---------ANAC58 <---------LBD16       <---------MYB52(1) ----DOF2--------->MYB52(1)      --------->At4g35610           <---------REM1(2)       --------->ARR14(2)   tttttcttgaataacagagcgattgctcttatctcagttgattggccatggcttcttcagtcgtcttcgcggcaactgggtctctctccgttcctccatt  1342900                                                                         ------>MYB83                                                                         ------>MYB46(1)                                                                       <---------MYB59                                                              --------->At5g28300                                                           <---------TOE1(3)                --------->TOE2(3)                       --------->DOF5.7(2)                --------->YAB1                        <---------ZAT6<-----------GT1          --------->GLK1(2)                     --------->TGA1a >>>>>>>>>GT-2         <---------GLK1(2)                      =====================MYC_MYB        --------->GLK1(1)                    <---------ETT(1)----------->GT1        --------->HSFB2a(1)             --------->HSFC1(2)<---------DOF5.7(2)              <---------    <---------ANAC46        --------->ANAC46 --------->ANAC46------->GAMYB               <----------DOF2   <---------LBD16       --------->ZAT14<---------HSFC1(2)--------->MYB52(1)   --------->DAG2   gaagtctcggagattctatgttaattcttcactcgactccgatgtttccgacatgagtgttaacggtaattaaccaaacaaaaattgaattctttactgt  1343000                                      <---------ANAC46                    <----------DOF2--------->GLK1(2)             <-------TEIL         <---------GLK1(2)            <--------P            <---------ARR14(2)        <-----------RAV1(2)       --------->ARR14(2)       <---------MYB52(1)      <---------ANAC46                       --------->At5g28300      <-----------HVH21       <---------LBD16                        ----------->GT1      -----------     --------->ANAC46      --------->HSFC1(2)                     --------->GLK1(2)      <---------ZAT6 ------>ZmHOX2a(1)  --------------------->WRI1            <----------DOF2         <----------DOF2 --GT1<-----------TGA1     <---------HSFC1(2)         <---------GLK1(2)         ---------->ID1   ctcctctgcgtcaggttgattcctttggatgtttcggattctgggtatttcaattggattctttagaaaatcggtaaattttgtctttttagtggaaaat  1343100                                                         <---------DAG2                                                --------->HSFB2a(1)                                                --------->MYB46(3)                                                <---------KAN4(1)                                            --------->ANAC58                                            --------->ANAC58                                   <---------DAG2--------->KAN4(2)                                   <----------DOF2    <---------ALFIN1             <---------YAB1                        ---------->DOF2     <---------MYB52(2)     <------ZmHOX2a(1) >GT1              <------ZmHOX2a(1)   --------->ANAC46  <----------DOF2<---------YAB1              -   ttgagaaattgacatgtactaggattaaaaggcttagctttatgccacgaacaatcccacttttgaagaggatgatgtttcaattctcatggcatattga  1343200  Previous    Next  AGI:  At3g04870.1    Description:  ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase. Identical to Zeta-carotene desaturase, chloroplast/chromoplast precursor (ZDS1) [Arabidopsis Thaliana] (GB:Q38893;GB:Q93YN2;GB:Q9CAV3;GB:Q9LLY1); similar to PDS3 (PHYTOENE DESATURASE) [Arabidopsis thaliana] (TAIR:AT4G14210.1); similar to zeta-carotene desaturase [Citrus unshiu] (GB:ABC33728.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43021.1); similar to zeta-carotene desaturase [Citrus unshiu] (GB:BAB68552.1); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Amine oxidase; (InterPro:IPR002937); contains InterPro domain C Range:  from: 1342724    to: 1346393    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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