Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->LBD16                                                                         --------->HSFB2a(2)                                                                      --------->ARR14(2)         <---                                                                      <---------ARR14(2)      -------                                                                  <-----------------AGL2     <-------                                                                  <-----------------AGL1     <-------                                                                  <---------LBD16    <---------ANAC46                                                                  ----------------->AGL1   ----------                                                                 ------>MYB83        --------->HSFB2a(2)                                                                 ------>MYB46(1)  <---------ARR14(2)                                                                 --------->MYB52(1)  <---------HSFB2a(2)                                                 --------->At4g35610--------->LBD16 <---------LBD16  --------->YAB1                             --------->ANAC46------->TEIL<---------HSFB2a(2) -------- <-------TEIL        <---------YAB1   --------------->AtSPL3<---------CCA1(2)     --------->ARR14(2)   agattcatagttccattcgtattctaattagcaacgagtagaagtacaagtagctcaaacttgtaccttccggttctggtactggttccggagtagattc  1229000         -------->ZAP1       <-----------GT1                         --------->ATHB12       <---------WRKY18(1)                   <-----------HVH21                                 <-----      --------->WRKY38(1)               <---------ZAT2                                    ---------->DOF2      ----------->HVH21<----------DOF2  --------->ZAT2                                   <---------ATHB12 ------YAB1        <---------ZAT18      --------->At4g35610                         ------>ZmHOX2a(2) -->GLK1(2)        --------->ZAT14      <---------At4g35610                       <---------ARR11(3) --ARR14(2)        <---------ZAT14    <------ZmHOX2a(1)           <---------GLK1(2)<------ZmHOX2a(2) --GLK1(2)         --------->ZAT18  --------->ALFIN1       <---------AHL20(2)     --------->ARR11(3) ->ARR10<---------At5g28300        <------ZmHOX2a(1)       ---------->DOF2       <---------GLK1(1) ->ARR14(2)  <----------DOF2    <-----------RAV1(2)       --------->AHL20(2)     --------->GLK1(1)   tgatggttttgaccgctttagtgcgctcttgagaacaggaggagctgtgtcattggagcattaaatcagattagtaagaacagagatctcaataaagctt  1229100                                                                                  --------->GLK1(2)                                                                               ----------->ARR10                                                                             <---------ZAT14                                                                             <-------TEIL                                                                             <---------At4g35610                                                                            --------->ALFIN1               <---------SPL7                                             <---------ANAC58               --------->At5g28300                                        <---------ANAC46             --------->ANAC55(1)                                     --------->ATHB12      <---------ANAC46             --------->ANAC58                                     ---------->DOF2--------->ARR14(2)             --------->ANAC46                                   ----------->HVH21<---------GLK1(2)---  <----------DOF2                                              --------->TOE1(3) <---------ARR14(2)  <---------DAG2                                          --------->YAB1  <---------ANAC58 <---------ANAC58 -----DOF2   --------->ANAC58  --------->ATHB51        <-----------GT1   <---------MYB46(3)<---------ANAC58   tctgctttataaaacacggtaccaatagacccattatcggataaattgttcaagaattaagcatacctgaaagattgggtgcagattcttctggcttcga  1229200                                        <------ZmHOX2a(1)                               --------->ZAT2                               --------->At4g35610                               <---------ZAT2                                                    ----                               <---------At4g35610                                               <---                              <---------ARR14(2)                                            <--------       <---------ZAT18   --------->GLK1(2)                                                  <--------       --------->ZAT18   --------->ARR14(2)                                                 --------- <----------DOF2        --------->ARR14(2)        <---------ATHB12                  --------->ARR11(3) <---------DAG2         <---------ARR14(2) --------->HSFC1(2)                      <---------At4g35610 --->ZmHOX2a(2)         <---------GLK1(2)  <---------HSFC1(2)                    <--------P ---------   tcgctttagggcactcttgagaaccagaatcggagctggagaggaagtttcaatctttgactcgtctggtattggagaaattggtagctcttgctgctga  1229300                                                                                  <---------ANAC46                                                                                 --------->ALFIN1                                                                                --------->REM1(2)                                                                               --------->ALFIN1                                                                             --------->O2                                                                             <---------TGA1a                                                                             --------->TGA1a                                                                             <---------O2                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                            ------->MYC2                                                                            <-------MYC2                                                                            <-------MYC3                                                                            ------->MYC3                                        <---------CCA1(2)                  --------->ANAC58        --              --------->ATERF1(1)     <---------ALFIN1                 --------->ANAC58            <-             <------NtERF2          ------>NtERF2                   --------->WRKY18(1)         -----         <---------bZIP60(2)        --------->LBD16                <-----------HVH21           <----- ----->At4g35610                   --------->ANAC46       <---------LBD16  --------->ANAC58    ------ ------At4g35610<------NtERF2--------->ARR11(3)         --------->DEAR3(1) --------->TGA1a    ------>NtERF2 -At4g35610  --------->ATERF1(1)  <---------LBD16       <---------DEAR3(1) <---------TGA1a    ------- -ZAT2  --------->ALFIN1     <---------ARR11(3)         --------->ETT(2)  ------->TEIL       -------- >ZAT2 <------ZmHOX2a(1)     <---------GLK1(2)          ----------->HVH21<---------ALFIN1    <------- >At4g35610--------->ALFIN1----------->ARR10       --------->ARR14(2)  --------->ANAC58     ---------   gatgaagaaggaggtggcagccctgagaatagattttccgccatctctctccagttcgtcgacggagacggtcacgcacgcgtgtggggaagacggagcc  1229400          <---------ANAC58          <---------ANAC58      <---------GLK1(1)     --------->ARR14(2)     <---------ARR14(2) ------->ARR14(2)                                  --------->GLK1(2) --------ARR14(2)                                 <---------ARR14(2) ---->RAP2.6(2)                                   <---------GLK1(2) -NtERF2  <---------ANAC46                        --------->ARR14(2) --->RAP2.3(1) ------->TEIL                     ----------->ARR10                     <---------DAG2 -->At4g35610 *TSS           <----------DOF2   <-----------RAV1(2)                    <----------DOF2 ->ARR14(2)--------------->AtSPL8              <---------ALFIN1                --------->AHL20(2)   - --ARR14(2)<---------------AtSPL3            ----------->RAV1(1)          --------->At4g35610 ------- >ATERF1(1)<---------------AtSPL8       ---------->DOF2  ------>NtERF2    <---------At4g35610<<<<<<<<   gaaactggatttgtgtgtacgtcttatgggccttttatgaaataaagccccagattctcggcccaaatagttttggagctaaaaaatacttttttggaca  1229500                                                                                             <-------                                                                                          <---------ICU4                    <---------YAB1                                                        <---------ARR11(3)        <---------AHL20(2)                      --------->AHL20(2)                        --------->ARR11(3)       <---------AHL20(2)                     ----------->GT1                             <---------AHL20(1)       --------->AHL20(2)                   ---------->DOF2                               --------->AHL20(1) ---------->GT1   --------->AHL20(2)    --------->At4g35610                         --------->YAB1 ----->CBF <-----------TBP              <---------At4g35610           --------->ANAC46 --------->YAB1 <<<<<<<<<LFY    <---------AHL20(2)  --------->At4g35610     <-----------GT1       ----------->GT1  -   atgggtaaattttttttatattatttatgagtttctctcttctgcagaaagaaaatatacaaattacatcatacacaatttcaaattgataatattttcg  1229600                                                                       <---------ZAT14       <-------                                                                       <---------ZAT18       <-------TEIL                                                                       --------->ZAT14       --------                                                                   --------->DAG2            --------                                                                ---------->DOF2              <-------                                                              <---------YAB1             ------------                                                         --------->WOX13(1)           <---------At4g35610 ----GT1         <-----------GT1                     <----------DOF2   --------->ZAT18--------->At4g35610 ---------->GT1<----------DOF2              --------->ANAC46  <---------TOE2(3)  <---------ZAT6     -   ttttgaaaaaacaaatactttacagtctctcacaattgaactacatactccatgcctttcaattaagaaagagtgaactacaagtgttagctaagtacac  1229700 <---------AHL20(2) --------->ARR11(3) <---------ARR11(3) --------->AHL20(2) <---------AHL20(1) --------->AHL20(1)                                                           --------->SPL7 --ZAT14                                    --------->HSFB2a(2)               <---------ZAT14 ->ZAT18                                    <---------HSFB2a(2)               --------->ZAT14       - ->ZAT14                          ----------->GT1                             <-------TEIL          < --ZAT18             --------->CCA1(2)   <---------AHL20(2)           <---------AHL20(2)      ------- --->AtSPL8   ---------->DOF2   ---------->DOF2 ---------->DOF2   --------->YAB1            <-------- -------->AHL20(2) --------->CCA1(2) <---------AHL20(2)          <---------ATHB12      --------->AHL20(2)   aaatatattaaggggagaaagagataagacttgtgaaagttaatttatagaaaagaatagagaacaaatcatataatcggtacagtcgtttatttaacac  1229800                                                              <----------DOF2                                                              <---------DAG2                                                             XXXXXXXXXXXXXXXXXXX>MIR394A/B                                                             <---------ANAC58                                                        <----------DOF2                                                     ------>MYB46(1)                   <---------ATHB12                                                   --------->AtMYB61                --------->AHL20(2)                                                   <---------ALFIN1                 <---------AHL20(2)                       <---------ANAC58            ------->GAMYB                   --------->AHL20(2)                       <---------ANAC58           <---------MYB55(2)            --------->AHL20(2)                  --------->ATHB12                --------->MYB46(3)            <---------AHL20(2)      <----------DOF2  <---------ANAC46         <-----------GT1                 --------->AHL20(1) -------->AHL20(2)--------->ATHB51          --------->GLK1(1)<---------ANAC58  --------->AHL20(2) ---------AHL20(2)<---------ICU4          <------ZmHOX2a(1) ---------->ID1     <---------AHL20(2) -->ZAT6         --------->ICU4        --------->LBD16<---------DAG2     --------->TOE2(3)        <-- ---GT1          <---------YAB1       --------->LBD16------>MYB83    --------->ETT(2)--------->WOX13(1)   aattaattctttttgtttcattattgtgtgttatgtagtcccgaggagttcaaccaccctttggctttttgtctacctcaattaaattaatcaataagtt  1229900  Previous    Next  AGI:  At3g04560.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO65029.1) Range:  from: 1227366    to: 1229414    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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