Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
------>
ZmHOX2a(1)
--------->
ARR11(3)
<---------
ANAC58
<---------
ANAC46
--------->
ANAC55(2)
<----------
DOF2
<---------
ANAC55(1)
--------->
ANAC58
<----------
DOF2
<---------
ARR11(3)
--------->
ANAC58
------>
ZmHOX2a(1)
----------->
GT1
<---------
ARR11(3)
<-
---------->
DOF2
<-----------------
AGL1
<-----------
GT1
--------->
ARR11(3)
-----
-------
YAB1
<---------
ANAC58
<---------
ANAC55(2)
<---------
MYB52(1)
<----
-
MYB46(3)
<---------
ANAC58
<---------
ANAC58
<-------
GAMYB
<---------
CCA1(2)
------
atgaaaagccatattgctttcctctttagccaaattgcgtgttaatatccttcccgttgcatttgattctatatcttgtttctgtttgatttttatgcat
1183900
-----
------
-------
--------->
YAB1
<------
--------->
At4g35610
-------
<---------
At4g35610
<------
----------
HVH21
------->
TEIL
---->
At4g35610
<---------
GLK1(2)
<---------
CCA1(2)
-----
At4g35610
---------->
DOF2
<---------
MYB52(1)
->
TEIL
<---------
YAB1
--------->
GLK1(2)
--------->
MYB52(2)
<
ctgtcacctccatgatagtttctcttggttaatggctgaaacaagtttagttttggatagagaatcaaagagtctcttcttgttcgtttgtatctttcct
1184000
--------->
KAN4(2)
--------->
KAN4(1)
--------->
At5g28300
<---------
KAN4(1)
->
ZmHOX2a(1)
<----------
TaMYB80
--------->
AGL15
--------->
HSFB2a(1)
---------->
AG
<---------
HSFB2a(1)
-----------
AG
---------->
DOF2
---------->
TaMYB80
---------->
AGL1
<----------
DOF2
--------->
DAG2
-----------
AGL1
--------->
ARR11(3)
---------->
DOF2
<-----
---------
LBD16
<---------
ARR11(3)
---------->
DOF2
---------->
DOF2
<---------
KAN4(2)
cttgcggtatatgttgaagaactttagggaaacaaagtgaatgaaagctaagagttttttttatgaccaaaggcaaaacaaaaagtgaagaatattcctt
1184100
<-------
TEIL
--------->
GLK1(1)
<-----------
GT1
----------->
GT1
--------->
ARR11(3)
---------->
DOF2
<---------
ARR11(3)
-----
DOF2
----------->
GT1
<------
ZmHOX2a(1)
--------->
YAB1
--------
tggaaagttttgaaagggaaatacatataggatattaactaggcgaatggaattttttcactcatacagagtcattttctgtatatataacttagtgatt
1184200
<---------
ALFIN1
--------->
ZAT6
<-----------
GT1
<---------
ANAC58
<------------
CBF
<-------
<---------
ANAC58
<---------
ARR11(3)
--------
<---------
ANAC46
--------->
ARR11(3)
<-------
<XXXXXXXXXXXXXXXXXXXX
MIR3933
---------->
DOF2
--------->
GLK1(1)
--------
->
ATHB12
<------------
CBF
<---------
ANAC46
<----------
DOF2
<---------
CCA1(2)
------------>
CBF
gtgagttctcatattgcttctatgtaacactccttgtaaagctaaatagcccttttgtgctaagtctctgatatctattgttatcttctcaatactgcac
1184300
--------->
YAB1
<----------
DOF2
----------->
HVH21
--------->
ARR14(2)
<
*
TSS
<---------
ARR11(3)
<----
------------>
CBF
<<<<<<<<<
MYB2
--------->
ARR11(3)
--------->
HSFC1(1)
--------
--
ZAT18
<---------
ANAC58
<---------
CCA1(2)
--------->
HSFB2a(2)
------>
ZmHOX2a(1)
->
ZAT18
<---------
ANAC58
<----------
DOF2
<---------
HSFC1(1)
<---------
MYB59
--
ZAT14
<---------
STY1(2)
--------->
LBD16
<---------
HSFB2a(2)
<----------
DOF2
<
->
ZAT14
--------->
STY1(2)
--------->
ANAC46
<-----------
GT1
<---------
ARR11(3)
<
tt
gttca
atgacacttgctagcgattttggttttccatccgctatatcttcatcttttacaattctagaagagagataccacaataactttcctaacact
1184400
--------->
ALFIN1
<---------
At4g35610
----------->
RAV1(2)
--------->
SPL7
--------->
ARR14(2)
<-----------
HVH21
<-----------
RAV1(1)
<---------
ATERF1(1)
------>
ZmHOX2a(1)
<---------
ARR14(2)
--------->
ANAC46
<---------
ARR14(2)
<---------
AGP1
-------->
P
================================
RAV
<---------
ANAC46
---------
ANAC58
------->
GAMYB
<-----------
RAV1(2)
<---------
MYB46(3)
------
DOF2
<------
ZmHOX2a(1)
--------->
MYB46(3)
--------->
ANAC55(2)
<--------
P
->
ZAT6
<---------
ICU4
<-----------
GT1
<-----------
HVH21
<---------
MYB46(3)
---------
ANAC46
--------->
YAB1
----------->
HVH21
<---------
AtMYB61
---------
ANAC58
<------
ZmHOX2a(1)
------->
GAMYB
>>>>>>>
GRF7
<-----------
RAV1(1)
ttgtgtgtttcatcaggacaggaatcgatgaataacaaccccgtcccctgtcaggtgtttcctctggtctctggtggtagttctggtgggaatttgtttt
1184500
----
<---
----
<---
----
----
----
--------->
GLK1(2)
<---
--------->
ARR14(2)
----
<---------
ARR14(2)
--------->
ANAC58
<-------
<---------
GLK1(2)
--------->
ANAC58
<-------
--------->
LBD16
--------->
ANAC58
<---------
ANAC58
<--------
--------->
HSFB2a(2)
--------->
ANAC58
<---------
ANAC58
<-----------
RAV1(1)
<---------
HSFB2a(2)
--------->
ANAC46
<---------
At5g28300
<---------
At5g28300
<---------
LBD16
<---------
ANAC46
------>
ZmHOX2a(1)
<-----------
GT1
<-----------
GT1
<-----------------
AGL1
<---------
At4g35610
<---------
At4g35610
-----------------
catcttcttccggattctgcaatggtgtctatgtttcatcttcctcccaggcacggccatctgtttctaccgtgccaagagacagaattactgttgctca
1184600
<---------
REM1(1)
----->
ANAC58
------
TGA1a
----->
ANAC46
------
ANAC55(2)
----->
ANAC55(2)
<---------
ANAC58
----->
ANAC58
<---------
bZIP60(2)
----->
TGA1a
<---------
ANAC58
------
O2
<---------
ATHB12
<---------
ICU4
----->
O2
--------->
ZAT18
--------->
WOX13(1)
--------->
YAB1
--
ANAC58
<---------
At4g35610
--------->
AtLEC2
--------->
TOE1(3)
<---------
ANAC46
--
ANAC58
--------->
At4g35610
<---------
ANAC46
--------->
TOE2(3)
<---------
YAB1
-
At4g35610
<------
NtERF2
<---------
ANAC46
<---------
ANAC58
-------->
P
----------->
GT1
------>
TaNAC69(2)
<------
ZmHOX2a(1)
<---------
ANAC58
------->
TEIL
--------->
ICU4
cgtctctggtgaagggcagaggcaggaatgccctgtggaaacacattccttgcaattgatcaatcaacctcaagaacagaaaattatgacttggtcttca
1184700
--------->
ZAT2
<---------
ZAT2
--------->
ANAC58
--------->
CCA1(2)
<------
ZmHOX2a(2)
<----------
DOF2
<---------
ARR11(3)
<-------
TEIL
--------->
AGP1
<---------
At4g35610
--------->
CCA1(2)
<---------
ARR14(2)
--------->
ARR14(1)
--------->
ARR14(2)
<---------
At4g35610
--------->
YAB1
--------->
GLK1(2)
--------->
HSFB2a(2)
--------->
At4g35610
<----------
DOF2
<---------
GLK1(2)
<---------
HSFB2a(2)
----------->
RAV1(1)
<---------
ANAC58
--------->
ARR14(2)
================
HOX2a_HOX2a
--------->
ANAC46
<---------
ARR14(2)
------>
ZmHOX2a(1)
--------->
At4g35610
--------->
ANAC58
--------->
ARR11(1)
<-----------
GT1
--------->
ANAC46
--------->
ANAC58
----------->
ARR10
<-----------
GT1
--------->
ANAC58
<---------
TOE2(3)
<---------
ANAC58
--
gaccagattcggggcttcttcgattttcctgttccagatccacaagcagcgagcagcagaactatggtttcatccaaggaagtgctttcaaaatgcgaat
1184800
Previous
Next
AGI:
At3g04450.1
Description:
transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G29000.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO44634.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447)
Range:
from: 1184303
to: 1186346
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version