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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                              ------>ZmHOX2a(1)
                                          --------->ARR11(3)
                                 <---------ANAC58
                                 <---------ANAC46
                                 --------->ANAC55(2)
             <----------DOF2     <---------ANAC55(1)
  --------->ANAC58  <----------DOF2       <---------ARR11(3)
  --------->ANAC58------>ZmHOX2a(1)----------->GT1                  <---------ARR11(3)            <-
---------->DOF2 <-----------------AGL1    <-----------GT1           --------->ARR11(3)         -----
-------YAB1 <---------ANAC58     <---------ANAC55(2)<---------MYB52(1)                         <----
-MYB46(3)   <---------ANAC58     <---------ANAC58  <-------GAMYB   <---------CCA1(2)          ------
 
atgaaaagccatattgctttcctctttagccaaattgcgtgttaatatccttcccgttgcatttgattctatatcttgtttctgtttgatttttatgcat  1183900
                                                                                               -----
                                                                                              ------
                                                                                             -------
         --------->YAB1                                                                      <------
  --------->At4g35610                                                                        -------
  <---------At4g35610                                                                        <------
----------HVH21                                                                        ------->TEIL
---->At4g35610                                                    <---------GLK1(2)   <---------CCA1(2)
-----At4g35610                                                ---------->DOF2     <---------MYB52(1)
->TEIL  <---------YAB1                                     --------->GLK1(2)    --------->MYB52(2) <
 
ctgtcacctccatgatagtttctcttggttaatggctgaaacaagtttagttttggatagagaatcaaagagtctcttcttgttcgtttgtatctttcct  1184000
                                                                                         --------->KAN4(2)
                                                                                        --------->KAN4(1)
  --------->At5g28300                                                                   <---------KAN4(1)
->ZmHOX2a(1)                                                                            <----------TaMYB80
--------->AGL15                                                                         --------->HSFB2a(1)
---------->AG                                                                           <---------HSFB2a(1)
-----------AG                ---------->DOF2                                           ---------->TaMYB80
---------->AGL1   <----------DOF2                                             --------->DAG2
-----------AGL1--------->ARR11(3)                                            ---------->DOF2  <-----
---------LBD16 <---------ARR11(3)      ---------->DOF2          ---------->DOF2        <---------KAN4(2)
 
cttgcggtatatgttgaagaactttagggaaacaaagtgaatgaaagctaagagttttttttatgaccaaaggcaaaacaaaaagtgaagaatattcctt  1184100
                  <-------TEIL
               --------->GLK1(1)<-----------GT1
            ----------->GT1--------->ARR11(3)
        ---------->DOF2    <---------ARR11(3)
-----DOF2  ----------->GT1<------ZmHOX2a(1)               --------->YAB1                    --------
 
tggaaagttttgaaagggaaatacatataggatattaactaggcgaatggaattttttcactcatacagagtcattttctgtatatataacttagtgatt  1184200
                       <---------ALFIN1
                       --------->ZAT6
                     <-----------GT1
            <---------ANAC58                                            <------------CBF    <-------
            <---------ANAC58                                        <---------ARR11(3)      --------
            <---------ANAC46                                        --------->ARR11(3)      <-------
 <XXXXXXXXXXXXXXXXXXXXMIR3933    ---------->DOF2                   --------->GLK1(1)        --------
->ATHB12<------------CBF    <---------ANAC46    <----------DOF2    <---------CCA1(2)------------>CBF
 
gtgagttctcatattgcttctatgtaacactccttgtaaagctaaatagcccttttgtgctaagtctctgatatctattgttatcttctcaatactgcac  1184300
     --------->YAB1                               <----------DOF2
    ----------->HVH21                    --------->ARR14(2)                                        <
  *TSS                                   <---------ARR11(3)                                    <----
------------>CBF          <<<<<<<<<MYB2  --------->ARR11(3)  --------->HSFC1(1)             --------
--ZAT18      <---------ANAC58           <---------CCA1(2)    --------->HSFB2a(2)         ------>ZmHOX2a(1)
->ZAT18      <---------ANAC58         <----------DOF2        <---------HSFC1(1)         <---------MYB59
--ZAT14     <---------STY1(2)       --------->LBD16          <---------HSFB2a(2)    <----------DOF2<
->ZAT14     --------->STY1(2)      --------->ANAC46  <-----------GT1             <---------ARR11(3)<
 
ttgttcaatgacacttgctagcgattttggttttccatccgctatatcttcatcttttacaattctagaagagagataccacaataactttcctaacact  1184400
                                                   --------->ALFIN1
                                                 <---------At4g35610
                                          ----------->RAV1(2)
                                        --------->SPL7--------->ARR14(2)
                                      <-----------HVH21                        <-----------RAV1(1)
                                      <---------ATERF1(1) ------>ZmHOX2a(1) <---------ARR14(2)
                                     --------->ANAC46 <---------ARR14(2)    <---------AGP1
                                 -------->P    ================================RAV<---------ANAC46
---------ANAC58                 ------->GAMYB  <-----------RAV1(2)        <---------MYB46(3)
------DOF2  <------ZmHOX2a(1)  --------->MYB46(3)--------->ANAC55(2)     <--------P
->ZAT6   <---------ICU4      <-----------GT1 <-----------HVH21         <---------MYB46(3)
---------ANAC46              --------->YAB1 ----------->HVH21         <---------AtMYB61
---------ANAC58  <------ZmHOX2a(1) ------->GAMYB>>>>>>>GRF7        <-----------RAV1(1)
 
ttgtgtgtttcatcaggacaggaatcgatgaataacaaccccgtcccctgtcaggtgtttcctctggtctctggtggtagttctggtgggaatttgtttt  1184500
                                                                                                ----
                                                                                                <---
                                                                                                ----
                                                                                                <---
                                                                                                ----
                                                                                                ----
                                                                                                ----
          --------->GLK1(2)                                                                     <---
         --------->ARR14(2)                                                                     ----
         <---------ARR14(2)                      --------->ANAC58                           <-------
         <---------GLK1(2)                       --------->ANAC58                           <-------
       --------->LBD16                       --------->ANAC58     <---------ANAC58         <--------
      --------->HSFB2a(2)                    --------->ANAC58     <---------ANAC58     <-----------RAV1(1)
      <---------HSFB2a(2)                   --------->ANAC46    <---------At5g28300  <---------At5g28300
     <---------LBD16 <---------ANAC46   ------>ZmHOX2a(1)      <-----------GT1      <-----------GT1
     <-----------------AGL1       <---------At4g35610  <---------At4g35610         -----------------
 
catcttcttccggattctgcaatggtgtctatgtttcatcttcctcccaggcacggccatctgtttctaccgtgccaagagacagaattactgttgctca  1184600
     <---------REM1(1)
----->ANAC58
------TGA1a
----->ANAC46
------ANAC55(2)
----->ANAC55(2)                                                                      <---------ANAC58
----->ANAC58                                                                         <---------bZIP60(2)
----->TGA1a                                                                          <---------ANAC58
------O2                                                   <---------ATHB12     <---------ICU4
----->O2                 --------->ZAT18                 --------->WOX13(1)     --------->YAB1
--ANAC58      <---------At4g35610             --------->AtLEC2  --------->TOE1(3)    <---------ANAC46
--ANAC58      --------->At4g35610           <---------ANAC46    --------->TOE2(3) <---------YAB1
-At4g35610    <------NtERF2<---------ANAC46 <---------ANAC58  -------->P ----------->GT1
------>TaNAC69(2)    <------ZmHOX2a(1)      <---------ANAC58  ------->TEIL     --------->ICU4
 
cgtctctggtgaagggcagaggcaggaatgccctgtggaaacacattccttgcaattgatcaatcaacctcaagaacagaaaattatgacttggtcttca  1184700
                                                --------->ZAT2
                                                <---------ZAT2
                                        --------->ANAC58
                                  --------->CCA1(2)
                                  <------ZmHOX2a(2)
           <----------DOF2       <---------ARR11(3)
    <-------TEIL                 --------->AGP1 <---------At4g35610
   --------->CCA1(2)             <---------ARR14(2)
   --------->ARR14(1)            --------->ARR14(2)<---------At4g35610              --------->YAB1
   --------->GLK1(2)          --------->HSFB2a(2)  --------->At4g35610           <----------DOF2
  <---------GLK1(2)           <---------HSFB2a(2) ----------->RAV1(1)           <---------ANAC58
  --------->ARR14(2)     ================HOX2a_HOX2a                    --------->ANAC46
  <---------ARR14(2)     ------>ZmHOX2a(1)      --------->At4g35610     --------->ANAC58
  --------->ARR11(1)  <-----------GT1   --------->ANAC46                --------->ANAC58
----------->ARR10    <-----------GT1    --------->ANAC58    <---------TOE2(3)   <---------ANAC58  --
 
gaccagattcggggcttcttcgattttcctgttccagatccacaagcagcgagcagcagaactatggtttcatccaaggaagtgctttcaaaatgcgaat  1184800
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AGI:  At3g04450.1   
Description:  transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G29000.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO44634.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447)
Range:  from: 1184303    to: 1186346    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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