Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->ARR14(2)                                  <---------ARR11(3)                      --------->ANAC46                                                          <----                      --------->ANAC58                                                          -----                      --------->ANAC58          ---------->DOF2                      <----------DOF2                   <---------ARR14(2)       ---------->DOF2                       <-----------GT1                   --------->ARR14(2)   <----------DOF2                        <---------ARR11(3)<---       <---------GLK1(2)          --------->ARR11(3)                           --------->AHL20(1)---- --->YAB1 <---------ANAC58       --------->CCA1(1)        ---------->DOF2      --------->ARR11(3)<--- ---ATHB12<---------ANAC58       --------->RVE1(1)       ------>ZmHOX2a(1)    --------->AHL20(2)-----   aaattttcaaattcttgtccatatacgcctatcaaatatcttcttttaaagaaagtctcctaaagagttgaaaacttgaaatatatacttttctaaaata  1080600                                                                                                    <                                                                                                   <-             <---------MYB52(1)                                                         ------>NtERF2            <----------DOF2                                                            <---------ANAC46            <-------GAMYB                                                             --------->RAP2.3(1)           <---------ANAC58                                                           --------->ATERF1(1)          <---------------------WRI1                                                  <------NtERF2<-  <---------AHL20(1)                                                                 <---------ATERF1(1)  --------->AHL20(1)                                                                 <---------DEAR3(2)  --------->AHL20(2) <---------HSFB2a(2)                                             <---------RAP2.3(1)  <---------AHL20(2) >>>>>>>ZML2                                                     <---------ORA47(2) <---------AHL20(2)  --------->HSFB2a(2)                                            <---------DEAR4(1) --------->AHL20(2)  --------->HSFC1(1)                                             <---------DEAR3(1) -----AHL20(1)       <---------HSFC1(1)                    --------->ZAT14          --------->ETT(1)- ---->AHL20(1)  <---------ANAC58                           <---------ZAT18          <---------RAP2.3(3) ------YAB1<---------ANAC58                          <------NtERF2                  <---------DREB2C(2) ----->AHL20(2) <---------ANAC58                     <---------At4g35610           <---------ORA47(1) ------AHL20(2) <---------ANAC55(2)                <---------DEAR3(1)   --------->WRKY18(1)  -------- ---->AHL20(2)  --------->ANAC55(2)       <---------------AGL15 <---------O2      <-----------HVH21--   taattttatttgggcgttacgttctagaaaatggaacccgtctactaaaatgggccgctcgtgaactcgtggcagtcaaacactggtcggcgcataaaag  1080700                                                                     <---------ANAC58                                                            --------->LBD16              <---------ANAC58                         --------->KAN4(2)              <---------ANAC46                        <---------HSFB2a(1)              <---------ANAC58                        --------->KAN4(1)         <-------GAMYB             ------>NtERF2                            --------->HSFB2a(1)       <---------At4g35610          --------->At4g35610                         <----------TaMYB80     <-------TEIL      <---------ARR14(2)     --------->ANAC46         <---------KAN4(1)   --------->At4g35610      --------->ARR14(2)     ----------->HVH21       ---------->TaMYB80   <---------At4g35610 ---------ARR14(2)          --------->MYB46(3)       <---------KAN4(2)<-----------HVH21 --------GLK1(1)       <---------ANAC58         ---------->DOF2      <---------ANAC58 --------CCA1(2)       <---------ANAC58        --------->AHL20(2)  <---------ANAC58              <--- -------->ARR14(2)    <---------ICU4           <---------AHL20(2)  <---------ANAC58     <-----------HVH21 -->DOF2 --------->ANAC46 -------->P       <---------AHL20(2)      <---------ANAC46    --------->O2 ------->GLK1(1)     <---------YAB1        --------->AHL20(2) <---------GLK1(2) --------->At4g35610 <   catatccaaatacgctgcgtttcatgcttacccgacccgtcttaaatatttaaagaatattccagattagcgcgtgagatgcagttgccatgtctcgcct  1080800                                                                                                    <      <---------TGA2(1)                                                                             -      <---------ETT(2)                                                                             <-      --------->TGA2(1)                                                    <---------TOE1(3)       --      <---------bZIP60(1)                           -------->HAHB4         --------->MYB59         --      --------->ETT(2)               --------->At5g28300    ------------>CBF                       <-      --------->bZIP60(1)           ------->GAMYB   --------->ATHB12       <---------TOE2(3)       <-     ----------->STF1               ----------->GT1--------->ICU4      <----------DOF2             --   ----------->TGA1             --------->REM1(1)  <---------YAB1  <------MYB83          <----------- --------RAV1(2)           --------->AGP1     <------ZmHOX2a(1)    <------MYB46(1)  ---------->DOF2<- ------ZmHOX2a(1)     --------->MYB52(1)    <---------TOE2(3)     --------->MYB59<---------TOE2(3)<--   caggaatgacgacatttgccaaaataacagagctacaacggtaaataaggaaaatgattaagggcaatttggtcttttaggttaagaaaagtattgaatc  1080900      <----------DOF2  ----------->HVH21 ------>ZmHOX2a(2)                                                                         <---------ARR14(2) ------ZmHOX2a(2)                                                                       --------->ANAC55(2) -------->CCA1(2)                                     ------>ZmHOX2a(1)                 <---------ANAC55(2) ----------ARR10                        --------->KAN4(2)  ------->MYC3                 --------->ANAC46 ------->ARR11(3)                      --------->KAN4(1)   <-------MYC2                 --------->ANAC58 ------->ARR14(2)                      <---------KAN4(1)   ------->MYC2                 --------->ANAC58 --------ARR11(3)                     =======================HOX2a_HOX2a                --------->ANAC55(1) --------AGP1                         <------ZmHOX2a(2)    <-------MYC3                <---------LBD16 ------->AGP1   --------->ANAC58     <---------ARR11(3)  *TSS                       <-----------HVH21 -CBF <---------DAG2          --------->MYB46(3)  <---------ALFIN1            <-----------GT1 --------ARR14(2)           --------->ANAC46<---------ETT(1)          <----------DOF2<---------REM1(2) -------CCA1(2) --------->ANAC58     --------->ARR11(3) <---------ALFIN1 --------->AHL20(2)--------->ARR14(2)   agatctgactttttggccaagaaaaactctcagccactagatcattccgacccctcctccacgttcttctctcttttaaataacctcttcacggaaccct  1081000                       --------->RVE1(1)                                               --------->MYB52(2)                      <---------ARR11(3)                                             ================               --------->ZAT6       <-----------ARR10                                <--------P     <         ------>MYB83 --------->ARR11(3)                                    <---------------AGL15====         ------>MYB46(1)           --------->WOX13(1)                       --------------->AGL15<---        <---------CCA1(2)       ------>NtERF2               --------->ZAT6 <-----------------AGL2<---   tctcactcacctatctcactctaaaatctctctctgccaatctcatcttcaacctctctctaactctcgttttcgattctacaatgggttagtctctcgc  1081100                    <---------At4g35610                   <---------DEAR3(1)                 <-----------HVH21                <---------O2                                                            --------->At4g35610                --------->TGA1a                                             ---------->ID1----------- =========================MYC_MYB                               <---------YAB1          --------->ZAT2 -----------GT1 <---------TGA1a                         ------>ZmHOX2a(2)  <-------GAMYB<---------At4g35610 =========================bZIP_DOF                  ----------->HVH21     <---------MYB46(3) -------DOF2    --------->O2   <---------TOE2(3)   ------>ZmHOX2a(2)      --------->MYB52(2) ------DAG2 <-----------HVH21 <-----------GT1     <---------At4g35610 <---------YAB1   ------->TEIL   ttttactaatctctcgtcccgtcgctgctattttacgttgttgagttttctgatctgatcgtttttctgattttgtttgttgttttatgtagctgacaag  1081200                                                                                --------->At4g35610                                                                               --------->ARR14(2)                                                                               --------->GLK1(2)                                                                               <---------ARR14(2)                                                                           --------->HSFB2a(2)                                                                           <---------HSFB2a(2)                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                                        --------->ARR11(3)                   --------->At5g28300                                  <---------ARR11(3)                  ------->GAMYB                                         --------->AGP1               --------->MYB52(1)                                       <---------AGP1 <-------GAMYB      --------->ARR14(2)                                                --------->ARR14(2)      <---------ARR14(2)                                                <---------ARR14(2)  <--------     <------ZmHOX2a(1)                                            ------->TEIL<---------GLK1(2)   <-- >HVH21 ------>ZmHOX2a(2)                                        <---------CCA1(2)    <---------MYB46(3)   aagattaggatcggaatcaacggtgagtttcgaatcgattttgtaattcgggtttgtatgttctcatgtatctagatctagaatctgactgttgatttct  1081300                                   <---------ANAC58                                   <---------ANAC58         <---------GLK1(2)      <--------P         --------->ARR14(2)    <-------GAMYB         --------->ARR11(1)    <---------ANAC58        <------ZmHOX2a(1)      <---------ANAC58                                   ------->GAMYB       <---------YAB1         <---------MYB46(3)                                 <---------MYB52(2)    <---------MYB52(1)        <------MYB46(1)                                    --------->MYB46(3) <---------TOE2(3)            <------MYB83                                    <---------WRKY12 <---------TOE1(3)           <---------AtMYB61                                <---------WRKY38(1) <---------YAB1          <---------MYB46(3)                                 <-----------HVH21-------- -GLK1(1)<---------ARR14(2)<---------MYB52(1)                     <---------At4g35610        <------- -------MYB52(1)     <---------AtMYB61           <---------HSFB2a(2)    <---------DEAR3(1)--------->REM1(1)   gttatcgttaggattcggaagaattggtcgtttggttgctagagttgttctccagagggacgatgttgagctcgtcgctgtcaacgaccccttcatcact  1081400                                      <---------MYB46(3)                 ------>ZmHOX2a(2)       ----                                    --------->At5g28300                --------->ARR11(3)      ------                                  <---------DEAR3(1)             <---------AHL20(2)          <-------                         <---------TOE2(2)                     <---------AHL20(2)          <---------YAB1                         <---------TOE1(2)                    --------->YAB1            --------->GLK1(2)    <-------TEIL       <---------ANAC58       ------>ZmHOX2a(2)<---------YAB1          --------->ARR11(3) ->ZAT6       <---------ZAT6   ----------->HVH21              <---------AHL20(1)       <---------GLK1(2) --ICU4   <--------P   <---------ANAC58     --------->ARR11(3)--------->AHL20(2)     ----------->ARR10   actgagtacatggttagtgttccttccttggttttgacggtgattcgatcttggtttgcttcaatattattttgatctcttgacgataagattctgttag  1081500  Previous    Next  AGI:  At3g04120.1    Description:  GAPC (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase. Identical to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (GAPC) [Arabidopsis Thaliana] (GB:P25858;GB:Q42352;GB:Q9M8W8); similar to GAPC-2, glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G13440.1); similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (GB:P04796); contains InterPro domain Glyceraldehyde-3-phosphate dehydrogenase, type I; (InterPro:IPR006424); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Glyceraldehyde 3-phosphate dehydrogenase; (InterPro:IPR0 Range:  from: 1080957    to: 1083537    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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