Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <-----------------AGL1                                                ------>NtERF2               <---------AHL20(2)             --------->TOE2(3)                 ----------->HVH21           <---------AHL20(2) -------->CCA1(2)                              --------->MYB46(3)          --------->AHL20(2) --------GLK1(2)                               --------->DEAR3(1)    <----------DOF2 ------->ARR14(2)                          --------->DEAR3(2)  --------->ARR14(2) ------->ARR10     ----------->TGA1       ------->TEIL         <---------ARR14(2) --ZAT6      --------->TOE1(3)--------->At4g35610<xxxxxxxxxxxxxxxxsmallRNA(s)   agatttgcaaatttcccttaaatgacgaagtttgctcaaaaatgaatcgacgaccgagtttggcatatatgcttttttttaatagaaaaacaaaacaatt  986600                                                                       --------->YAB1                                                                      <---------YAB1                                                                    --------->YAB1                                                                   --------->ICU4             <------                 <-------TEIL                                      <---------YAB1             -------               <---------ARR14(2)                                <---------ICU4              --------               --------->ARR11(3)                               --------->ICU4               <-------               <---------ARR11(3)                   <---------------AGL15                  <---------ICU4            <xxxxxxxxxxxxxxxxsmallRNA(i)            --------------->AGL15                  --------->YAB1           <------NtERF2                           --------->ZAT6--------->ATHB51         --------->AHL20(2)         <---------ANAC46                         --------->ZAT14<--------HAHB4           <---------AHL20(2)        <---------LBD16      ---------->DOF2      <---------ZAT14<--------ATHB1           --------->ICU4   --------->ATHB12         --------->YAB1       <---------ALFIN1--------->YAB1           <---------ATHB51  <---------YAB1<------ZmHOX2a(2)       ---------->DOF2         <---------ATHB51         --------->AHL20(2) <---------ARR11(3)        <---------YAB1    --------->ZAT18    <---------ATHB12<----------DOF2  ---- <<<<<<<<<<GT-1--------->ARR14(2)   ---------->DOF2--------->REM1(1)<---------ICU4       <---------AHL20(1)   ctatatcattggcggaagatccatacactataaaagtataaagaaagagccctacactatatagcaataattatcagaatagctttaacaaaataattat  986700                                                                              <---------HSFC1(2)  --------->CCA1(2)                                                           --------->HSFB2a(1)  --------->GLK1(1)                                   --------->ARR11(3)      --------->HSFC1(2) <---------ARR11(3)                                 --------->ANAC46          <---------HSFB2a(1) --------->ARR11(3)                               <-----------GT1    --------->AHL20(2)         <---- ---ICU4        <-----------GT1                 --------->CCA1(2)    <---------AHL20(1)         ----- -->YAB1     <---------ICU4                     <---------GLK1(1)    --------->AHL20(1)       ------- ->ICU4     <---------YAB1                     --------->ARR11(3)    <---------AHL20(2)     <-------- --YAB1   --------->YAB1               <---------MYB52(1)           --------->AHL20(2)    <---------ARR14(2) ----->YAB1 --------->ICU4   ------->TEIL      <---------ARR11(3)------>ZmHOX2a(1)  <-------GAMYB   caagatatcgaaacataattacgttgttatcaacctagtccgtttaatagatatacgatattgtttcctattaaattggaaatttcggttacaatccgga  986800                                                                          --------->AHL20(2)                            --------->MYB59                     --------->AHL20(2)                          --------->ARR14(1)                    <---------AHL20(2)        --------->ARR11(3)                         <---------ARR14(2)                     --------->ATHB12          <---------ARR11(3)                         <---------GLK1(2)                      --------->ATHB51         <------ZmHOX2a(1) -----ARR14(2)    --------->ATHB12                             --------->ICU4  ---------->DOF2 ---->ARR14(2)   <---------YAB1        ----------->GT1 --------->MYB52(1) <---------AHL20(2) -->LBD16     <----------DOF2<---------ANAC46      --------->DAG2        --------->ICU4 ----------->GT1 -LBD16<----------DOF2   --------->ARR14(2)       ---------->DOF2        --------->AHL20(2)   ttcaatacacttttgacttttgatttggattcggtatagtttggataaactaaaaagtaaggggaattatttgtaataaataaaagtagaaggatattag  986900                                                                                       --------->ANAC58                                                   --------->AHL20(2)                  --------->ANAC58                                                   <---------AHL20(2)             --------->ANAC58                                               <---------AHL20(2)            <---------WRKY18(1)                                            --------->YAB1                  --------->WRKY38(1)                                            --------->AHL20(2)              --------->WRKY12               <-----------GT1          <---------YAB1                      --------->WRKY45            ----------->GT1           --------->YAB1                        <---------ETT(2)          <------------CBF     <-----------GT1 --------->AHL20(2)        <-----------RAV1(1)    <---- --------->AHL20(2)       <----------DOF2--------->YAB1*TSS      <----------DOF2  --------->ANAC58---   aaaaaaaattcaaattgtaacaagtcgtctttttctctgttcataataaaaaattaaaaacccttgtctttccaactgttgaccaagacaagccctctcc  987000                                                                                                <----                                                                                               ------                --------->ANAC58                                                              -------                --------->ANAC58                 ----------->RAV1(1)                    --------->ATHB12                --------->ANAC46       --------->ANAC46                                --------->ICU4            --------->HSFB2a(2)      --------->REM1(1)                                 <---------YAB1    <---------GLK1(2)         <----------DOF2   <----------ID1                    <---------ANAC58 -----ALFIN1<---------HSFB2a(2)     <---------ZAT14                               <---------ANAC58 -- ------>ANAC46---------->DOF2<---------ICU4 ---------->DOF2              <---------At4g35610  <------   acttcagattgtttctaaaagcaattctcaatcttttctacaccgaaatagcaacaaaatgaattcaatctcttcatcttccatgcgtcgtaattggata  987100                                  --------->LBD16                                 --------->ANAC58                                 --------->ANAC46                                 --------->ANAC58                        <---------ZAT14                        --------->ZAT14                       --------->ALFIN1                                    ---------->DOF2                    <---------DEAR3(1)                                  --------->ANAC58          --------->LBD16<-----------RAV1(2)                            --------->ANAC58         <---------HSFB2a(2)    <---------LBD16                  <---------At4g35610 ---TEIL --------->HSFB2a(2)<-----------ARR10                    --------->At4g35610               -- --->CCA1(2)        --------->ANAC46                             <---------GLK1(1)                 <- -->ARR14(2) <---------ZAT2--------->At4g35610                   --------->ZAT2                 ----- ------->ANAC46    <---------LBD16<------NtERF2                <------ZmHOX2a(1)              <------ ---ARR14(2) --------->ZAT2<---------At4g35610       <---------ALFIN1 --------->At4g35610   ---------   cacgatgtcttcccgagcttccacggtgcagatgtccgcaaatcgtttctgagtcacactctgaaggagctcagaagcaaaggtatcgacttattcattg  987200                                                                                           --------->ANAC58                                                                                           --------->ANAC58     --------->ARR11(3)                                                                   <-------TEIL     <---------ARR11(3)                                                                 <---------ARR14(2)    <---------GLK1(1)                                                                   --------->ARR11(1)    --------->GLK1(1)                                                                   <---------GLK1(2)  --------->YAB1                                                                        --------->ARR14(2) <---------YAB1                   <---------At4g35610                                 ----------->ARR10 ------->YAB1          <-----------GT1                                   <---------ANAC58--------->CCA1(2) --------ICU4        <---------AHL20(2)   --------->DAG2        --------->ANAC58    ---------->DOF2 ---->YAB1         --------->GLK1(2)     ---------->DOF2        --------->ANAC58--------->HSFB2a(2) ---WOX13(1)   <------ZmHOX2a(1)  --------->At4g35610    ------>ZmHOX2a(2)      <---------HSFB2a(2) >ATHB12      ----------->GT1 <----------CDC5   <------ZmHOX2a(2)        <---------ANAC58--------->ARR14(1)   ataatgatatcttgagaggagaatttatcggccctgagctcaaaaaagcgatccatggatcgaggctcgcgattgtcttgctctcgaaaagatacgcttc  987300                                                                                           <---------At4g35610                         <------NtERF2                --------->WRKY18(1)               ------>ZmHOX2a(2)                        --------->LBD16         <----------DOF2                        <------ZmHOX2a(2)          <---------ANAC58   --------->ICU4   <---------HSFC1(2)                      --------->ARR14(2)          <---------ANAC58   --------->GLK1(2)--------->HSFC1(2)                      <---------ARR14(2)       <---------ANAC46<---------ANAC46  --------->ANAC58                          --------->ALFIN1  <---------ANAC46    <---------LBD16    --------->ANAC58                     --------->ANAC46  <----   ttcgtcgtggtgtcttgacgaattggcggagattatgaagtgcaaggaagcttttggtcaaacagtgatggccattttctacgaagtggatccaactgat  987400                                                         <---------At4g35610                                                         ----------->RAV1(2)                                                         --------->ZAT2                       -------                     <---------LBD16                     <---------ZAT2                      --------                    <---------ANAC46             --------->At5g28300                 <---------ARR11(3)            --------->LBD16            <-----------------------TaNAC69(2)            --------->ARR11(3)         --------->MYB52(1)    <---------REM1(2)----------->GT1                    --------->ANAC58     --------->At4g35610       <---------ZAT14 ----------->GT1 <------ZmHOX2a(1)   --------->ANAC58 -----REM1(1)    <---------ARR14(2)  <---------GLK1(2)   --------->At4g35610    --------->WRKY18(1)   gtagagaagcagaccggaggttttggggaagtcttcacagaaacttgtgagggtaaaacagctgaggacattgagaaatggagtcaagctcttgcaaaag  987500  Previous    Next  AGI:  At3g03855.1    Description:  expressed protein, similar to GB:AAC72977 (Arabidopsis thaliana) Range:  from: 986955    to: 990745    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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