Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->LBD16                                                                   <------NtERF2       --------->ZAT2                                                                   <---------ANAC46    <---------ZAT2                                                                  <---------LBD16      --------->At4g35610                                                                  --------->LBD16      <---------At4g35610             <------NtERF2                                        <------NtERF2        ----------->RAV1(2)            --------->LBD16                                       ------>NtERF2      <-----------RAV1(2)           <---------ANAC46        <---------ANAC58              --------->DEAR3(1) ------>ZmHOX2a(2)           --------->ETT(1)        <---------ANAC58             <---------LBD16    <------ZmHOX2a(2)          <---------LBD16     <----------DOF2                  <---------RAP2.3(1)--------->ARR14(2)      <----------DOF2        <---------DAG2            <---------MYB52(1)         <---------ARR14(2) -----DEAR3(1)   --------->GLK1(2) <---------ANAC46   <----------DOF2  --------->GLK1(1)        -----   ggtgtcttctttgccggagagtctgatttcgcctttggcttaggcttagccttggcctttggtttcgccgcgggtttcttagtggatccagctgaaacca  866600                  <-----------RAV1(2)            <---------HSFB2a(2)         <---------ANAC46         <---------ANAC58                               --------->At4g35610   --------->ANAC46         <---------ANAC58                               <---------At4g35610   --------->ANAC58        <------NtERF2<------ZmHOX2a(1)     --------->At4g35610  ------->GAMYB --------->ANAC58       <---------MYB46(3)                  ------>ZmHOX2a(1)   --------->ANAC58    --------->GLK1(2)      --------->ALFIN1            ================HOX2a_HOX2a  --------->ANAC58   --------->WOX13(1)   --------->ALFIN1  ====================HOX2a_HOX2a--------->TOE2(3)--------->ARR11(3) ----->DOF2 --------->HSFB2a(2)   <------ZmHOX2a(2) --------->TOE1(3)<---------ARR11(3)      <-------   aagaagaggtggctcgagaagcaggagctagaagcgatctagctcctctgaaaaccatagctgcaacggaagacattttctcgccaatctagttttttct  866700                                                                            <-------MYC3                                                                            <-------MYC2                                                                            <-------PIF5                                                                            ------->PIF5                                                                            ------->MYC2                                                                            <-----------HVH21                                                                            ------->MYC3                                                                           ==========================                                                                           --------->ANAC46                                                                           --------->O2                                                                           <---------O2                                                                           --------->ANAC58                                                                           --------->ANAC55(2)                                                                           --------->ANAC58                                                                           --------->TGA1a                                                                           <---------ANAC55(2)                                                                           --------->bZIP60(2)                                                                           ==========================                                                                         <------------OsbHLH66                                                                         <---------ALFIN1                                                                       ------>NtERF2                                                                --------->WRKY38(1)         ---------                                                                --------->WRKY12<---------bZIP60(1)                                                              <----------DOF2----------->TGA1                                                              =======================bZIP_DOF                                                            >>>>>>>>>>>>WRKY18  --------->bZIP60(1)                                                          <---------WRKY18(1)----------->HVH21     <---------At4g35610                                 ----------->HVH21 <---------TGA1a --------->ARR11(3)     --------->At4g35610         <------ZmHOX2a(1)  <---------TOE2(3)  ----------------->PIF3(1)  ------>ZmHOX2a(1)        --------->GLK1(2)      ===================================bZIP_DOF    ---- ----GT1     ----------->GT1   <---------TOE2(3)  ---------->DOF2      <-----------HVH21   <---------ARR11(3)   tctccttcgctgagagtgtgattttggagaatttaggaaagtttttgggagaaaaaggtttgacctttgactctgccacgtgacgacgtttgagatatga  866800                                                                                   --------->YAB1                                                                                   <--------HAHB4                                                                                   <---------ICU4                                                                        --------->ANAC58       ------     <----------DOF2<----------DOF2                                     --------->ANAC58    --------- ===============bZIP_DOF                                              --------->ZAT14       <-------- ===============bZIP_DOF                                           ------->GAMYB  <---------ATHB12 >CCA1(2)      ---------->DOF2  <---------TOE2(3)                 --------->MYB46(3)       <---------CCA1(2) --->TEIL  --------->ZAT6  <----------DOF2                <----------DOF2         --------->ICU4-----   aacttgtcttttgacactaaagctttcaactttcaaggattaagatgcgaaagtttccaactttctcaacagtccagccatggaatcattttcatatcct  866900                                                                         --------->AHL20(2)                                                                      --------->YAB1                                                                      -------->HAHB4                                                                     --------->ICU4                                                            <---------CCA1(1)                                                            <---------RVE1(1)                                                           --------->ARR11(3)                                                           <---------ARR14(2) --->TOE2(3)                             --------->ATHB12  <---------ARR11(3) >ARR14(2)                <---------At4g35610  <-----------GT1       <---------YAB1              ---- -ARR14(2)              <---------RAP2.6(2)<---------WOX13(1)        ----------->GT1     ---------->DOF2 ->ZmHOX2a(1)     <-------TEIL   <----------DOF2         ----------->ARR10<---------AHL20(2) --------   ttgtaatagcttcgacaaaattcatggctgcttctctttctattgattaatacattacgaagatatttgtaatgataaaattgctcagagataaagaaag  867000               <------ZmHOX2a(1)                 <-----------------AG       ----------->HVH21                       --------->ICU4       <---------YAB1                     ----------->GT1             --------->ANAC58     --------->CCA1(2)                   <---------TOE1(3)            --------->ANAC58     <------ZmHOX2a(1)   --------->YAB1                        <---------TOE2(3)  <------------CBF         --------->YAB1  <---------YAB1  <---------At4g35610    --------->DAG2   --------->ARR11(3)        <---------ATHB51 ------->GT1   *TSS    <----------DOF2   --------->MYB59--------->MYB59         ------------>CBF >>>> -->DOF2     <---------TOE2(3) <-----------RAV1(1)      <---------TOE2(3)   --------->YAB1-----------   ggttatgatatgactgaggaagatgctttgattctgtcgaggtaaggtaataactaataaggtattgttgacaagctatagtgacaataataaggagaaa  867100                                                                    <---------MYB46(3)               <---------YAB1                                       --------->MYB52(2)             --------->YAB1                                       <---------MYB52(1)               --            <---------YAB1                                      <---------DEAR3(2)  --------->RVE1(1)            --------->ICU4       --------->At5g28300            <---------MYB46(3) --------->ARR11(3)        ------------>CBF        <------MYB83                   <---------DEAR3(1)  --------->GLK1(2) ---------->DOF2  <---------YAB1<------MYB46(1)                <---------TOE2(2)   <---------ARR11(3) >>>>>MYB2  <---------ATHB12    ----------->GT1           --------->MYB52(1) <---------HSFB2a(2)   == >GT1  --------->MYB52(1)    <------ZmHOX2a(1)    --------->At4g35610        --------->HSFB2a(2)-----   accaaaagctaacaatgataattcttggagaggatggtaactgagttaagagagcttaaacaacgtcggtttgttccatcgagaaaatctctgaagcaca  867200                                                                                                <----                                                                                                -----                                                                                           --------->AtLEC2                                                                                     <----------DOF2                        --------->At4g35610                                       --------->ARR11(3)                        <---------At4g35610                              --------->MYB59   --------->ANAC58 ----->GAMYB       --------->TGA1a                                       --------->MYB52(2)--------->ANAC58 ============================MYC_MYB              <---------WRKY18(1)  <---------MYB52(1)  --------->ANAC46 ---->MYB52(1)     <---------TGA1a       --------->GLK1(2)   ---------->DOF2      <---------ARR11(3)   acgacatcgcaactattccacaagtgagaagaccagaagagagaatcaaacttgaccatcttgaaaagtctaagttagttccaagagctttacatgcaaa  867300                                                                              <---------ANAC46                                                                            --------->ZAT18                                                                            <-------TEIL                                                                            --------->ZAT14                                                                            <---------ZAT14                                                                          <-------PIF4                                                                          <-------MYC3                                                                          ------->PIF5                                                                          <-------MYC4                   <---------WOX13(1)                                     ------->PIF4                <---------YAB1              ------>ZmHOX2a(2)             ------->MYC4          --------->LBD16                 <---------ARR11(3)              ------->MYC3         --------->HSFB2a(2)              --------->ARR11(3)              <-------MYC2         <---------HSFB2a(2)          <---------ANAC58                    ------->MYC2   ------>MYB46(1)        <---------LBD16               <---------ANAC46                    <-------PIF5   ------>MYB83 -----ARR14(2)<------ZmHOX2a(1)       <---------ANAC58                  ------------>OsbHLH66       - ---->ARR14(2)=====================================HOX2a_HOX2a         <------------OsbHLH66   <-----   ttttcttagtcccggaggatgatagatggagactaacatggcttgatcttacttcttactaacaatctctgtagcacgtgcagtggaaaccaagccgatc  867400                 ------->GAMYB                <------------MYB.PH3(2)                --------->MYB46(3)                <---------MYB52(2)              ----------->RAV1(1)      <---------TOE2(3)          <---------------AtSPL8      <---------YAB1             --------------->AtSPL8    --------------->AGL15        --------------->AtSPL3                                   <---------GLK1(2) -------->MYB46(3)  --------->ZAT6                                                  ----------->HVH21 -ZmHOX2a(2) <----------ID1   <------ZmHOX2a(1)      ----------->HVH21         <------ZmHOX2a(1)   aaaccactaagattagcaacaaactctaccgaggataagtacaacttcaagaggtatgaccagagatgccccaaaaaatcaggaacatgacagaaactcg  867500  Previous    Next  AGI:  At3g03590.1    Description:  SWIB complex BAF60b domain-containing protein. similar to SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G35605.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68050.1); contains InterPro domain SWIB/MDM2; (InterPro:IPR003121) Range:  from: 865190    to: 867015    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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