Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->At4g35610                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                                --------->ARR14(1)                                                --------->CCA1(2)                                               <---------ARR11(3)                                               <-----------ARR10                                               --------->ARR11(3)    --------->MYB46(3) ----------->RAV1(1)     --------->ARR14(3)            <-------TEIL  --------->MYB52(1)------>MYB46(1)            <---------ARR14(3)       ---------->DOF2 -------->MYB46(3)  ------>MYB83               --------->ARR14(2)     <---------HSFB2a(2) -----YAB1       ==================RAV         <---------ARR14(2)     --------->HSFB2a(2)       ----- -->YAB1         ----------->RAV1(2)           --------->AGP1    <----------DOF2         --------->ZAT6 --YAB1        <-----------GT1                 <---------AGP1    <---------DAG2        ----------->RAV1(1)   catccaacggctctgtataacctgccaacaaaataacattcaagttcaagatctgcttcataactcacttttctaaaagtccatgacttcaacagtaatc  781200                                                          ----------->GT1                                                       ---------->DOF2  --------------->AGL15                                            --------->AHL20(2)          <---------------AGL15                                          --------------->AGL15        ----------------->AGL1            ------>ZmHOX2a(1)             --------->HSFB2a(2)          <-----------------AG        <---------ARR14(2)                ==============================================MADS_MADS        --------->ARR14(2)                <---------------AGL15        ----------------->AGL2       --------->GLK1(1)                  <---------HSFB2a(2)<-------TEIL          <---------YAB1       <---------GLK1(1)            <---------ICU4   --------->ANAC58  <-----------------AGL2     --------->LBD16            --------->AHL20(2)   --------->ANAC58  <-----------------AGL1 ---->TOE2(3)      --------->YAB1 <-----------GT1--------->ARR11(3)  <-----------GT1   taaattccgaaatcctctctattatcaagctcaaataaacatttctataaatatcaagaaaggttcaaaatttaccagttttgggattatagagagacca  781300         ---------->DOF2              --------->ANAC58       <----------DOF2<---------STY1(2)     --------->At4g35610              --------->ANAC58 --------->ARR14(2)   --------->At4g35610       <---------GLK1(2)   <<<<<<<<<TBF1 <---------ARR14(2)  --------->MYB52(2)   <---------ALFIN1<----------DOF2   gaggctctgcttaaaggcaaggttagctagaaatattcggacccaaacccgaatttcagactttgaattcttcttcttagaatgcagaatagagcctcca  781400                                          <------NtERF2                                         ------>NtERF2                                         <---------ATERF1(1)                                         --------->LBD16                                        --------->DEAR3(1)                                        --------->ATERF1(2)                                        <---------DEAR3(1)                                        <---------ATERF1(2)                                       --------->ATERF1(1)                                       <---------LBD16                                   <---------ALFIN1                                  <---------ZAT2                                  --------->O2                                  --------->bZIP60(2)                            <---------ARR14(2)                                  --------->ZAT2                          <---------ARR14(2)                                --------->DEAR3(1)                      ----------->HVH21                              ------>NtERF2<---------ANAC46         --------->ZAT2                              <---------ATERF1(1)                   <---------ZAT2                <---------LBD16 <---------ALFIN1                  --------->ANAC46               --------->MYB52(1) <---------O2                   --------->LBD16 --------->ARR14(2)             <---------ABI4(2)--------->LBD16              <---------DEAR3(2)<---------ANAC55(2)          ---------->DOF2    --------->ANAC46              --------->MYB55(2)--------->ANAC55(2)        <---------HSFB2a(2)  --------->ANAC58              <------MYB83--------->ANAC58        --------->HSFB2a(2)  --------->ANAC58              <------MYB46(1)--------->ARR14(2)    <---------GLK1(2)       ------>ZmHOX2a(2)              --------->MYB52(2)--------->ANAC58    <---------ARR11(3)      --------->MYB46(3)             <---------MYB46(3)--------->ANAC55(1)    <---------ARR14(2)     <------ZmHOX2a(2)              <---------TOE2(2)  --------->ANAC46    --------->ARR14(2)    --------->ARR14(2)              <---------TOE1(2)  --------->ANAC58  --------->LBD16 --------->LBD16------>NtERF2          <-------GAMYB  --------->ANAC58 --------->HSFB2a(2)      <---------ARR14(2)           <---------MYB46(3)<-----------HVH21          < <---------HSFB2a(2) <------ZmHOX2a(2)<---------ATERF1(1)<---------MYB52(1) <---------LBD16  --------   attccagatactagaagcaccggatcacgatccgccacctcgccggcgttttcatcgtcgttggttccccagcacggacacggaatccagcccatcaaag  781500                                                <---------LBD16                                  ========================HOX2a_HOX2a                                  ------>ZmHOX2a(2)                                 =========================HOX2a_HOX2a            <---------ARR14(2)   <------ZmHOX2a(2)            --------->ARR14(2)  <---------ARR14(2)         <---------ANAC58       --------->ARR11(3)         <---------ANAC58       <---------ARR11(1)                                                  <      <---------ARR14(2)        <---------ARR11(3)            --------->MYB111(1)                 <--      --------->ARR14(2)        <-----------ARR10            <--------P                *TSS ---------  <-----------RAV1(2)           --------->ARR14(2) <------ZmHOX2a(1)                --------->TOE2(3) -----------HVH21              <---------CCA1(2)<-----------RAV1(2)       <---------YAB1  <---------WRKY38(1) -->DOF2 <---------ANAC46      <---------ARR14(1) --------->LBD16--------->ALFIN1 <-------TEIL   ----   cgggtcaggtttcgggtccgaaatattcaattcggatctttctacagagttcaggagaaaatggtaagtgggacttatcagaggtacattagtcaacaat  781600                                                                <-------MYC2                                                                ------->MYC2                                                                <-------MYC3                                                                ------->MYC3                                                               <---------bZIP60(2)                                                               <---------TGA1a                                                               --------->TGA1a                                                               <---------O2                                                     ------->MYC2                                                     ------->PIF4                                                     ------->MYC3                                                     <-------MYC3                                                     <-------MYC2                                                     ------->PIF5                                                     <-------PIF4                                                     ------->MYC4                                                     <-------MYC4                                                     <-------PIF5                                                    --------->TGA1a                                                    --------->ANAC55(2)            <----------TaMYB80                      <---------ANAC55(2)            <---------KAN4(1)                       <---------ANAC58       <---------HSFB2a(2)            --------->KAN4(1)                       =====================bZIP_bZIP           --------->ARR14(2)                   <-----------HVH21 <-----------HVH21           <---------KAN4(2)                 --------->ANAC58  --------->O2--------->HSFC1(1)           ---------->TaMYB80                --------->ANAC58  <---------ANAC46  <---------ANAC55(2)  --------->GLK1(1)                      --------->ANAC58      --------->ANAC55(2)  <---------GLK1(1)                      --------->ANAC58      <---------ANAC55(2)<---------MYB59 <---------ARR14(2)                      --------->ANAC46      <---------ANAC58  --------->ANAC55(2) ------ZmHOX2a(1)      ----------->HVH21 --------->ANAC55(1)   <---------ANAC58  ----------->RAV1(2) -------TOE2(3)    ----------->RAV1(2)<---------REM1(2)     ------>ZmHOX2a(1)  <---------GLK1(1)  --- --->CBF   --------->GLK1(2)        <---------ETT(2)<---------TGA1a        --------->HSFB2a(2)    <-- ----->YAB1<---------ARR14(2)       --------->ETT(2)<---------ANAC58<-----------GT1----------->HVH21-   gaggatttctgagaatatgccatctgtgactgtgactgtctacacgcaagcttcacgtgctcctcacgtgtcaccttctagatacctgacttatcgctct  781700                                       <---------ANAC58              --------->ANAC58         <---------ANAC58              --------->ANAC58     ------>ZmHOX2a(2)            <---------At5g28300    <---------ANAC58             <---------ARR11(3)            <-----------GT1                  -----    <---------ANAC58             --------->ARR11(3)         --------->ALFIN1                --------- ------>ARR11(3)            ------>ZmHOX2a(2)    --------->ANAC46                           <-------- -------ARR11(3)           <---------GLK1(1)     --------->ANAC58              --------->ARR14(2) ----->ZmHOX2a(2)     *TSS --------->GLK1(1)     --------->ANAC58              <---------ARR14(2)   gatcttccgtcttcaaacgacaacgtctgatctctgatcttccgttttaaaacgacatcaaggtgttactgtccaatttcagattgggttagaacatctt  781800                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              -------                                                                                             <------NtERF2                                                                                             --------                                                                     <---------TOE2(3)      ------>NtERF2                                                              <----------DOF2               <--------                                                             <---------ANAC46              <---------DEAR3(1)                                      <---------------AGL15  <---------ANAC58              --------->ETT(2)                                      --------------->AGL15  <---------ANAC58            <-----------HVH21  --------->ARR11(3)                 --------->TOE2(3)      <------NtERF2               <-----------RAV1(1)  <---------ARR11(3)        --------->ANAC58              <---------DEAR3(1)        --------->MYB46(3) ------>GT1                 --------->ANAC46          <---------TOE2(3)            --------->ANAC58 >ARR11(3)                  --------->ANAC58          <---------TOE1(3)            -------->P<------- -ARR11(3)              <-----------GT1              --------->MYB52(1)            --------->ANAC58   gtaatatctacaaacttgagggtgttttacacgaatatttcttaattaagaggcttaacgttggcgtttttgacgaaaatggagcaaccaatgtcgccgg  781900                  --------->HSFB2a(2)                  <---------HSFB2a(2)                  --------->LBD16             --------->GLK1(1)             <---------GLK1(1)       <------MYB83       <------MYB46(1)       <---------DEAR3(2)      <---------DREB2C(2)                                             <---------ARR14(2)      <---------DEAR3(1)                                              --------->GLK1(2)      <---------DEAR4(1)                                              ------->TEIL --NtERF2   --------->ARR11(3)                                        --------->ARR14(2) >NtERF2    <---------ARR11(3)                                   <-----------GT1                ----- --->LBD16  <---------AGP1                                     --------->AHL20(2)              <----- --->HSFB2a(2)------>ZmHOX2a(2)                                <---------AHL20(2)             <------ ---LBD16   <---------ARR14(2)                           ------>ZmHOX2a(2)                    ------- -->LBD16 <---------MYB46(3)                            <------ZmHOX2a(2)                     ------- ->ATERF1(1)--------->ARR14(2)                         --------->ARR11(3)                   <-------- -RAP2.3(1)<---------CCA1(2)                           <---------ARR11(3)                ------>ZmHOX2a(2) --LBD16<-------GAMYB    <---------AtLEC2             --------->GLK1(1)                --------->ARR11(3)   gaacgaagtcggtggatctccgagaatgcatggaatcacttctccgttttagtctgagatctcatttaaacgaatctgttccaagtttcgatcttgacct  782000     <---------ARR11(3)     <---------GLK1(2)     --------->ARR11(3)    <---------RVE1(1)          <---------At4g35610                          <---------YAB1 ------>HVH21                  --------->At4g35610                       <---------ATHB51 ----MYB59                    --------->ANAC58                           --------->ICU4 ---At4g35610                 --------->ANAC58                     --------->ANAC58 -->At4g35610             --------->HSFB2a(2)    <-------TEIL    <------ZmHOX2a(1) ---->RAV1(2)     <---------At4g35610   <-------TEIL           --------->MYB59 ------->TEIL -WRKY18(1) ---------->ID1<---------HSFB2a(2)<---------------AtSPL3--------->ANAC58            ------   gaccagagatttttgtcttcatctccttggggaagctacagattcaacaggtacgttttgctaattaggaagcaaattatgaaacttgaatgctggagag  782100  Previous    Next  AGI:  At3g03310.1    Description:  lecithin:cholesterol acyltransferase family protein / LACT family protein. similar to lecithin:cholesterol acyltransferase family protein / LACT family protein [Arabidopsis thaliana] (TAIR:AT4G19860.1); similar to phospholipase A1 [Nicotiana tabacum] (GB:AAQ05032.1); contains InterPro domain Lecithin:cholesterol acyltransferase; (InterPro:IPR003386) Range:  from: 778575    to: 781587    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g03320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G43470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46227.1); contains InterPro domain ProFAR isomerase-like (InterPro:IPR010759) Range:  from: 781722    to: 783471    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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