Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             ---------->DOF2     --------->ATHB12     <---------ICU4     --------->ATHB51    --------->ICU4    <---------YAB1                     <---------ATHB51                 ---------->DOF2  <---------ICU4                  --------->ANAC58                    <---------ANAC55(2) <---------YAB1                 ---------->DOF2                       <---------YAB1 ------->YAB1              --------->ARR11(3)                         --------->ANAC58 --------GT1               <---------ARR11(3)                         --------->ANAC58  <----------DOF2 ----AHL20(2)             --------->YAB1   <---------MYB46(3)  --------->ANAC55(2)     <---------DAG2 --->AHL20(2)       --------->YAB1--------->ANAC58             <---------ANAC55(2)  <-----------GT1   aacatcattatttgaaagaaaatcaaaatgatattaaagcaatagttgttaacttgtgtaagattacgaattacgaaagtgaacatttacctttttagcc  762700                                      --------->ANAC58                                  ------>ZmHOX2a(2)                                <---------ARR14(2)                                <---------ARR11(3)                                --------->ARR14(2)                               <------ZmHOX2a(1)                            <-----------RAV1(2)                        ------->TEIL  --------->ANAC58                       --------->ARR14(2)                       <---------GLK1(2)                       <---------ARR14(2)                                           ---------->DOF2                       <---------ARR11(3)    <-------TEIL        <-----------GT1 ------>ZmHOX2a(1)   ctagagagagtatcaagaacatcaagaacctcaggatcgtaagcaagtccatactgtttagacaaattaacctctctaaattcctccaaaggaattagcg  762800            ----------->GT1           --------------->AtSPL8    <--------HAHB4    --------->ATHB51    <---------ICU4    <--------ATHB1                                                         --------->AHL20(1)    --------->YAB1                                                         <---------AHL20(1)    --------->ATHB12         --------->YAB1      <---------YAB1          --------->AHL20(1)      ----   --------->ICU4 <----------DOF2              --------->YAB1            <---------AHL20(1)   -------   <---------ATHB12  --------->AHL20(2)       <---------YAB1   --------->ZAT6          <---------REM1(1)   <---------ATHB51  <---------AHL20(2)    <---------YAB1    <-----------GT1    ---------->DOF2------   ctgcaataattagtttgtaacttttaaatgatcaaaatacaaattttgatcataatatggagttaactctactaatatatattaaagagatgtagtaagt  762900                                                                                      ------>NtERF2                                                                                     --------->DEAR3(1)                                           ------>ZmHOX2a(2)                        --------->ATERF1(1)                                  --------->LBD16                                   --------->DEAR4(2)                                 <---------ANAC58         <------MYB83              <------NtERF2                  ================================HOX2a_HOX2a                       --------->RAP2.3(1)        ------->TEIL             <---------ANAC46         <------MYB46(1)          <---------RAP2.3(1)     ----------->HVH21           <---------ANAC58     <---------MYB46(3)           ------>NtERF2   <---------ANAC46             <---------LBD16    <---------ANAC46              <------NtERF2   <---------ANAC55(2)     <---------ARR14(2)      <-----------RAV1(1)           --------->ATERF1(1)   <---------ANAC58        --------->ARR11(3)    <----------DOF2                <-----------HVH21  --   <---------ANAC58        --------->ARR14(2)  <----------DOF2                  <---------ATERF1(1)<-   --------->ANAC55(2)    <------ZmHOX2a(1)<---------DEAR3(1)               <---------DEAR3(1)    ---   <---------ANAC55(1)    ========================HOX2a_HOX2a<---------ANAC46  --------->ALFIN1   <--  <-------TEIL    <---------HSFB2a(2)   --------->ATHB12<--------P        --------->MYB52(1)      <-- ----->AHL20(2)   --------->HSFB2a(2)  <---------YAB1<---------TOE2(3)   ----------->HVH21      ----- ---->GT1         ------>ZmHOX2a(1) <---------ARR14(2)--------->MYB55(2) ----------->TGA1 <---------REM1(2) ----->GT1       --------------->AGL15<---------KAN4(2)<-------GAMYB--------->YAB1<---------DEAR3(1)   taaatacgtgaaccggtttcctcgaagaggattttgcgggtatgatcggcgttttgtggttggacgtgaatcaagatgacggtgtcgccgtcttcaagga  763000            --------->MYB52(1)           <---------ALFIN1          --------->DEAR3(1)          --------->MYB46(3)          <---------MYB55(2)         <------NtERF2         --------->ATERF1(1)        --------->ABI4(1)        ------>NtERF2        <---------ATERF1(1)       --------->RRTF1(3)       --------->RRTF1(2)       --------->RAP2.3(3)       --------->DREB2C(2)       <---------ATERF1(2)       --------->RAP2.3(2)       --------->DEAR3(1)       --------->ATERF1(2)       --------->RAP2.6(2)      --------->ATERF1(1)      --------->RRTF1(1)      --------->RAP2.3(1)      --------->DEAR4(2)      --------->ORA47(2)      --------->ERF1                                                   <----------DOF2     --------->LBD16                                                  <---------ANAC58     <---------At4g35610                                              <---------ANAC58     ------>NtERF2                                                    <---------DAG2     --------->ABI4(1)                                           <---------ANAC58     <---------ATERF1(1)                                         <---------ANAC58     --------->At4g35610                                         --------->ANAC55(2)    --------->DEAR3(1)                                          ------->TEIL    --------->ANAC46                                            --------->SPL7   <---------LBD16                                              <-------TEIL ------->GLK1(2)                    <------NtERF2         <---------ALFIN1 ----------ARR10                  <---------DEAR3(1)      ------------------>SPL14 ------>ARR14(2)             <---------ANAC58            --------->MYB46(3) -------GLK1(2)--------->LBD16  <-----------HVH21        <---------MYB55(2) -------ARR14(2)    <---------At4g35610             <---------ALFIN1------->TEIL ------>ARR10<---------LBD16 <---------ANAC58<---------ZAT18  <---------SPL7     <-----------GT1   gattctccgccgcccaccggagagctaatttgctcgtcggagaatagtccattcccactcccaccgtacgtgcctttcccatttttctctcttgccctct  763100                                                                                                -----                                                    --------->MYB52(1)                     <---------ZAT18                                                   <-----------GT1                         --------->ZAT18                   --------->ATHB12             --------->YAB1                       <------------CBF     <---------------AGL15           --------->AHL20(2)                             --------->ATHB51     --------------->AGL15           <---------AHL20(2)                             --------->ATHB12    ------>ZmHOX2a(2)               <---------AHL20(2)                             <---------YAB1   -  <---------ARR11(3)    <---------TOE2(3)      <---------AHL20(2)                  <---------AHL20(2)  --------->ARR11(3)  *TSS<---------MYB52(1)------->TEIL                <----------DOF2   <---------ANAC46   cgatgatctctaagtagaaattgattacggtagtctaatttatatgtatataataaccggtttgatggtttagactttggagaatattattggcgcacac  763200                 <------------CBF                --------->YAB1                <---------ICU4                --------->ATHB12                -------->HAHB4                <--------ATHB1               --------->ICU4               <---------ATHB12               <---------YAB1              <---------TOE2(3)           --------->AHL20(2)             --------->GLK1(2)        <---------CCA1(1)                <---------ARR14(2)        <---------RVE1(1)                <---------GLK1(2)       --------->ARR11(3)    --------------->AGL15       <---------ARR11(3)    <---------------AGL15    <---------HSFB2a(2)<----------DOF2  --------->HSFB2a(1)                               <----------DOF2 ---->ANAC46<---------AHL20(2)          <---------HSFB2a(1)                     --------->TOE2(3) -------->ARR14(2)<---------WOX13(1)   ----------->ARR10                    <----------DOF2   agaattcgagatatttaatgattgtctttttcttctatggggagattcttgaaactactaggtctctctctctcgcttcttttcttaaaattctttgtta  763300                                                                                           ----------                  <---------ICU4                        <---------ANAC46     --------------->AGL15        --------->YAB1                                  <---------ANAC58     --------->TOE2(3)    ---        <---------ICU4                             <----------DOF2          ----------------->AGL3---       --------->ICU4                    <----------DOF2<---------ANAC58    =========================      <---------YAB1    <----------DOF2---------->ID1 <---------ANAC46    --------->ARR14(2)      <--   ctgagagtattaatgactagtcatttcttttgaatagttttgtctttttatttcttttgtgtgcataacatttcagtaacctcatatagtttgaaaagaa  763400          --------------->AGL15             <---------At4g35610                            --------->ICU4       <---------YAB1                  --------->bZIP60(1)                             --------->ZAT18  <---------AHL20(2)                   <---------bZIP60(1)                             --------->ZAT14 --------->AHL20(2)                    ====================================bZIP_DOF    <---------ZAT14 >DOF2<---------AHL20(1)        =================bZIP_DOF                    --------->TOE1(3) ------>ATHB51                  ---------->DOF2 <---------ARR14(2)           --------->TOE2(3)    --- ------>AHL20(2)           <---------ARR11(3)   --------->ARR14(2)         --------->ARR11(3)   ----- =========================MADS_MADS    <---------ANAC46         <----------DOF2 <---------AHL20(2)--- -------AHL20(2)         <---------YAB1<---------TGA1a     <<<<<<<<<MYB2   <---------ARR11(3) <------   ttatttaatatacttgatattgaaaacatgattttaaagtgatgtgagcgaatacattttggttttcttttagtcgaaatcttaaattgtgtactgatga  763500                               --------->ANAC46                      ------->TEIL                                                      <----------DOF2                   --------->ANAC55(2)                                        ----------->GT1                   <---------ANAC55(2)                                       --------->DAG2                 --------->CCA1(2)                                          ---------->DOF2                --------->ARR14(2)                                       --------->ANAC58                --------->ARR11(3)                                       --------->ANAC58 ------>ANAC58  <---------ARR14(2)                   <----------DOF2     --------->ANAC46 ----->DOF2<-------TEIL        --------->ANAC58--------->ARR14(2)      --------------->AGL15 ------>ANAC58  <---------ARR11(3)      <---------YAB1                =============================== ---YAB1  --------->CCA1(2)    --------->ANAC58<---------ARR14(2)     ----------------->AGL3     <---   aagccatagaagattcaagatatgtatttgcacacgtagagtattagtgaattctctttatctcacttgctctccaagaaaagtaatattctttgtcaac  763600  Previous    Next  AGI:  At3g03270.1    Description:  universal stress protein (USP) family protein / early nodulin ENOD18 family protein. similar to universal stress protein (USP) family protein [Arabidopsis thaliana] (TAIR:AT3G53990.1); similar to universal stress protein family protein [Brassica rapa] (GB:ABV89642.1); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729) Range:  from: 761317    to: 763122    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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