Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->YAB1                             <---------YAB1 >GAMYB                                      <---------AHL20(2)                          <---------AHL20(2) ---->HVH21                                  --------->AHL20(2)                          --------->AHL20(2) --MYB52(2)                                 --------->AHL20(2)                          --------->AHL20(2)   ccaattgaaaatgttctgtatttttagatgtgatgaactaagaaaattaaaataatgttctgtatttttagatgtgatgaactaagaaaattaaaattga  733000                  --------->TOE2(3)                --------->ARR11(3)                               <-----------------AGL2           <--                <---------ARR11(3)                           <---------MYB52(1)                  <---                --------->GLK1(2)                          <---------TOE1(2)              --------->YAB1          ----------->GT1          --------->ATHB12    --------->ATERF1(1)                --------->TOE2(3)    <---------TOE2(3)            <---------WOX13(1) <------ZmHOX2a(1)                  <----------DOF2   tgaattaagaaaatgaaaaatctaaattcttagagattgatgggctggactagaggagtcgcagttatctatattgggcctacaatgggctttcttaatt  733100                          <---------AtLEC2                    ------>MYB46(1)                --------->LBD16                               ------>MYB83                          <               <---------RAP2.6(2)              <-----------GT1                               -------      <----------DOF2   <-----------GT1      <---------ICU4 --------->MYB46(3)             --------->ANAC55(2) -------At5g28300<------NtERF2            --------->YAB1  <-----------GT1                  <---------ANAC55(2) --------GT1  <---------LBD16          <----------DOF2   <-----------GT1  <---------------AtSPL8 <---   tacagcctcttttttttgcggcaaatttacatgtctcttagctttcatatttacaaattttacccacttatactaactagtacaaattccatcatgtatt  733200                       <----------DOF2                       <---------DAG2         <---------AHL20(2)                                                             <---------ANAC58    <---------YAB1<---------DAG2                                                        <---------ANAC46 ----------DOF2  --------->ANAC46                                   ---------->DOF2     <---------ANAC58 >TEIL   --------->AHL20(2)                          <---------AHL20(2)   <---------HSFB2a(2) ------AHL20(2)<-----------GT1   <-----------GT1     --------->AHL20(2)   --------->HSFB2a(2)     ---   ttctttgtcattaaaatacaccttactttttgttttatccaattcatggcagaaattatatgtagaatgctaaagtctagaaatgttttggggtgtattc  733300               <---------ANAC46               <------MYB46(1)               <------MYB83              <---------AtMYB61              --------->MYB111(1)              --------->MYB59              --------->MYB55(2)                                      --------->REM1(2)              --------->MYB46(2)                                     --------->ALFIN1              --------->MYB111(2)           <------------CBF       <---------O2            <---------MYB52(1)             <---------ICU4          <---------ANAC58      --------->AHL20(2)                  --------->ICU4           --------->O2      <---------AHL20(2)                  <---------YAB1           <---------TGA1a     <---------YAB1                     --------->YAB1             <---------ANAC58     --------->ICU4                     <---------ICU4             <---------ANAC46   <---------ICU4                       -------->HAHB4             <---------bZIP60(2)  <---------AHL20(2)                    --------->ATHB12          ----------->STF1  --------->ICU4 --------->ALFIN1      <---------ATHB12          <---------TGA2(2)  --------->AHL20(2)   <----------DOF2 <---------YAB1           ----------->TGA1              *TSS  <---------ATHB51<---------MYB46(3)   --------->ICU4           ----------->HVH21   ----------->TGA1 ------>LBD16 --------->MYB52(2)  --------->TOE2(3)          --------->ICU4         ----------->HVH21   cgaaataattaatagttaggtggttcttttgaaatttcttaatgattattgtataatgctgtcaagatgacgtggagacccatgggatgacgaagttttc  733400                                                                         ------>ZmHOX2a(2)                                                                         ===========================HOX2a_HOX2a                                                                        ============================HOX2a_HOX2a                                                                        <------ZmHOX2a(2)                                                                       --------->ARR11(3)                                                                       <---------ARR11(3)                                                    ---------->DOF2    --------->ARR14(2)                                                 <------ZmHOX2a(2)     <---------ARR14(2)           -                                                <---------ARR11(3)     <---------AGP1           =====       <------ZmHOX2a(2)                       --------->GLK1(1)       --------->AGP1           <----      --------->ARR14(2)                <---------GLK1(1)             <---------CCA1(2)      ------>ZmHOX2a(1)    --------->ANAC58                  --------->ATHB12         <----------DOF2          <---------GLK1(1)    --------->ANAC58                <---------WOX13(1)      --------->ZAT6  <---------AHL20(2)  -----   actggcacgatccattcttcatcgattcaaactcttggattgatttcagagatcaaaagataacactttctcagatcttaaatttgtttgaattcctgct  733500           >>>>>>>>>ARR2          --------->ATHB12                      --------->At4g35610         <---------YAB1                         <---------At4g35610  <---------TOE2(3)                       <---------ANAC46  <---------TOE1(3)                   <---------ANAC58         --------->DAG2 --------->DOF2 <---------ZAT18       <---------ANAC58   <---------------AGL15 --------->YAB1 ========================================================================MADS_MADS      <----------DOF2 -----------AGL15          ----------->GT1<---------ANAC58    ---------->DOF2 <---------ATHB12 ---------->AGL15    --------->AHL20(2)   <---------ANAC58<---------MYB59   --------->WOX13(1)      -   cttaaaggtttttgattgtgcaattttttcggtaacaatggcttccttggagatgaatgacctaaaaagtaagtgttccaatcataaactctttgaatag  733600                                                             <-----------RAV1(1)                                                             <---------REM1(1)                   <---                                                         <---------WOX13(1)                      <---                                                       --------->ATHB12                          <---                                                      <---------YAB1                           <-----                                                      <---------AHL20(2)                       <-----                                                 <------ZmHOX2a(1)                             <-----                                               --------->ANAC55(2)                             <-----                                               <---------TOE1(3)                           <---------ARR14(2)                                               <---------TOE2(3)                     <---------WRKY18(1)                           ------>ZmHOX2a(2)--------->DOF5.7(2)         --------->CCA1(2)  --------->ARR14(2)      <---------ICU4       =============================HOX2a_HOX2a <------NtERF2   ----------->HVH21     --------->ICU4      <---------ARR11(3) <---------MYB52(1) --------->ALFIN1 <------MYB83  <------ ---------->GT1          --------->ARR11(3)--------->TOE2(3) <---------bZIP60(2)<------MYB46(1)<-----   ggatgtgataatgaactagtatccattgatcttgaattgctgaatcgttaaggaatttgattgatgtggcagagatagggctaggtttgactggatttgg  733700      <-----------GT1    <----------DOF2 ------ANAC58                                                                                      <- ------ANAC58                                                                           <---------ANAC46 ------ANAC46       <---------ZAT6                                        <-----------GT1      <----- ----ANAC58   ------>ZmHOX2a(1)                                 <------MYB46(1)       <---------ANAC46 -MYB83       <---------HSFB2a(2)                               <------MYB83          <---------ANAC58 ----ANAC46   --------->LBD16                                  <---------TOE1(2)      <---------ANAC58 -MYB46(1)    --------->HSFB2a(2)                              <---------TOE2(2)    <---------ANAC58 ---AtMYB61  --------->TOE1(2)                               --------->TOE1(2)      <---------ANAC58 ----ANAC58  <---------LBD16     ----------->HVH21         <---------------AtSPL3<----------DOF2 <---   tgtgttctttacattcctgggagtgatatttgtgtttgacaagggactcatagccatggggaacgtaggtctatttataccatctttggtgtgtgttctt  733800                                                          --------->At4g35610                                                          <---------At4g35610                                                  ------>ZmHOX2a(1)                                                ------>ZmHOX2a(2)                                              --------->ARR14(2)                                              --------->ARR11(3)                                              --------->AGP1                                              <---------GLK1(2)                                              <---------ARR11(3)                          --------->ANAC58                            <-----------RAV1(1)<------ZmHOX2a(2)                          --------->ANAC46                         <XXXXXXXXXXXXXXXXXXXXXMIR393A/B  --------->ZAT2   --------->ATHB12                        <---------GLK1(1)     <---------ARR14(2) ----------->HVH21        --------->ANAC58 --------YAB1       <---------TOE2(3)       ----------->ARR10  <---------ANAC58         ------->GAMYB -----DOF2          <---------TOE1(3)--------------------->WRI1<---------ANAC58       -------->P --------GT1  <----------DOF2        <----------DOF2      <---------ZAT2  --------->MYB46(3) --------   tacgattttagcaaggctttttaagggtctctgtggtctctttggacagatcctcttcttagctggtgtgactctaaccattggaatcaacccagcaatc  733900  Previous    Next  AGI:  At3g03180.1    Description:  Got1-like family protein. similar to Got1-like family protein [Arabidopsis thaliana] (TAIR:AT3G49420.1); similar to Got1-like family protein [Arabidopsis thaliana] (TAIR:AT5G01430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63466.1); contains InterPro domain Got1-like protein; (InterPro:IPR007305) Range:  from: 733394    to: 734490    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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