Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ALFIN1                                         --------->AtMYB61         -------->P                --------->YAB1     --------->ANAC58            --------->ANAC58                                       <---------YAB1     --------->ANAC58            --------->ANAC46                         ---------->DOF2     --------->ANAC46            --------->ANAC58          <---------TOE2(3)           <-----------GT1   gacttataagcaaccagaaacattatgccaatttcaagcatcaccatcaccgttcaaaattgatgttcaccaaaaacaaagtgtttgattttcatttcac  707300                                                                              <---------HSFB2a(1)                                                --------->ATHB12              --------->HSFB2a(1)           <---------TOE2(3)                    <---------ICU4                --------->HSFC1(2)          <-----------GT1                <-----------GT1                      <---------HSFC1(2)         <-----------GT1              --------->YAB1                  --------->MYB46(3)         <---        --------->AHL20(2)           <---------YAB1                 ------->GAMYB   ----------->GT1 --------->ANAC58          --------->MYB52(1)  <---------ATHB12    --------->MYB46(3)         <------ --------->ANAC58 <---------ANAC46 --------->YAB1                  <---------MYB52(2)         -------   atcaagaaaatttaacatttgagtgaaaaaaaccgaagaatgataaccattcattgcaaacaaacttcaacaaacaccgaaaattcttgtaaatttctag  707400         <---------MYB59         ------>ZmHOX2a(2)         ===================================HOX2a_HOX2a        ====================================HOX2a_HOX2a        <------ZmHOX2a(2)       <---------ARR11(3)       --------->ARR11(3)     <---------KAN4(2)     --------->At4g35610 ------GLK1(2)             ----------->GT1       <---------At4g35610 ---HSFB2a(2)        <<<<<<<<<<GATA-1         ---------->DOF2        ---------->DOF2 <---------MYB52(2) -->HSFB2a(2)   <---------TOE2(3)    ------>ZmHOX2a(1) <------ZmHOX2a(1)          --------->ZAT14   attatttgggatctaactaatgaaatcgagggtataatcctgaagaaattaagcagaggaagagagattggaaaagagagacagagaactaacatgaagc  707500                                                                            --------->ANAC46                                                                            --------->ANAC58                                                                            --------->ANAC58                               --------->ARR11(3)                     --------->DEAR3(1)                        --------->DEAR3(1)                            --------->DREB2C(2)               ------>ZmHOX2a(1)                                    ------>NtERF2         =============HOX2a_HOX2a <----------DOF2                  --------->DEAR3(1)         <------ZmHOX2a(2)     <---------ARR11(3)                  <---------ALFIN1        --------->ARR14(2)  ------>NtERF2               <---------ZAT18   ---------->DOF2        <---------ARR14(2) --------->DEAR3(1)           ------->GAMYB<------NtERF2    <---------LBD16     ------->GAMYB                  --------->ANAC58  <---------WRKY12    <---------HSFB2a(2)--------->DEAR3(2)              --------->ANAC58<-----------HVH21  <---------At4g35610    --------->HSFB2a(2)--------->MYB46(3)         ------>NtERF2 --------->ANAC46          --------->LBD16   cttcttctcggatcatcctcatgaaaccgccgagacctttctctctaatcgcctccaacgcactcttcgccaccgtcaaagccatcgtcttccgctatcg  707600                   --------->ARR14(2)                   <---------ARR14(2)               <---------LBD16             <---------ARR14(2)                            <------------CBF             --------->ARR14(2)                           --------->ATHB12             --------->GLK1(2)                            *TSS      --------->ANAC58            <---------GLK1(2)                            <---------YAB1    <---------MYB52(1)            --------->ARR14(2)                        ----------->TGA1 ------->TEIL              <---            <---------ARR14(2)                      <---------ICU4  --------->ANAC46<---------MYB46(3)        <---------LBD16      <-------GAMYB         --------->ICU4   --------->ANAC58<-----------RAV1(1)   ctctctctctctcggaatcgggatttgatttcgttgtcgaaataacaagggacatgatgacgattgctaaacgcatcgttttgtatttgttgggctacgc  707700                                             <---------bZIP60(2)                                             <---------REM1(1)                                             <-----------RAV1(1)                      --------->ANAC58    <---------YAB1                                         ----                      --------->ANAC58  --------->YAB1                                  <------MYB46(1)                    <---------ANAC58    <---------ICU4                                  ----------->GT1                    <---------ANAC58   --------->ICU4                                   <------MYB83           <---------PCF5              <---------ATHB12              <-------TEIL      --------->MYB59       ----------->RAV1(2)    <---------ANAC58      <------NtERF2   <-----------GT1--------->ATHB12 -------DOF2  <---------ALFIN1<---------ANAC58 --------->ALFIN1  ------->TEIL     <---------YAB1 ----   tttgtgtttacctgggccacttgctcgctatggccttccccatgatgatgtggcagagaagcatatgaatatacattttctactatgatttggtatatca  707800                    <---------DAG2             <------ZmHOX2a(2)           <---------AHL20(2)     ====================HOX2a_HOX2a           --------->AHL20(2)     ------>ZmHOX2a(1)           <-------GAMYB         --------->CCA1(2)   <----------DOF2  <---------ARR11(3)           <---------GLK1(1)        <---------ARR11(3)<---------ALFIN1    --------->ARR11(3)----------->GT1                     < ----->ANAC58       <----------DOF2 ---------->DOF2     --------->YAB1  <---------YAB1         ------ ----->ANAC58 --------->ARR14(2) --------->TOE2(3)     <-------TEIL  --------->ICU4     --------->YAB1   agaaatacaagatttaaatctgcttttcccactttcctcaaagcattagatcatacattcatagggttgtaattttgatttctcagtgaataagaagaga  707900                                                                                    --------->ANAC58                                                                                    --------->ANAC46                                 --------->AHL20(2)                         --------->GLK1(1)        <---------AHL20(2)      --------->AHL20(2)                          <---------GLK1(1)   -----       --------->ICU4 <---------MYB46(3)----------->GT1               ---------->DOF2      <---------YAB1 ---------ANAC46  <------ZmHOX2a(1)  ---------->DOF2            --------->YAB1      --------->ANAC58 --->CCA1(2)--------->YAB1    --------->YAB1  <-------TEIL     <---------YAB1  <---------ICU4  ------   tgatgtgtatttattcataaggagttgttcaaaaataaaaaaaggaaattcattttgtatatgttatcaaaaaaaaggaaatcactacgcattataaaac  708000                                                                                                 ----                                      --------->ANAC46                                         ------                         <---------TOE2(3)                                                    -------                    <----------DOF2   --------->ANAC58                                    <----------DOF2             ---------->DOF2          --------->ANAC58                                 <---------ALFIN1 ------------------->ANAC81      --------->ZAT6                  <-------TEIL       <-----------GT1 ------------------>ANAC81     <-----------GT1                --------->At4g35610  <-----------GT1   ccaaaaaaaaaaaaaaaaaggccttttaagttttaacactacgcattccaatttgctatgcattagcttcatagctaaatctgtttttcccactttcctc  708100                                                                                               ------                                                                                              <------                                                                                     --------->MYB52(1)                                                                                    --------->ANAC46                                                                                  --------->ANAC58                                                                                  --------->ANAC58                  --------->TOE1(3)                                              <---------ZAT18                  --------->TOE2(3)                                              --------->ZAT18          --------->ARR11(3)                                                     <---------ZAT14    <          <---------ARR11(3)                                                     --------->ZAT14  <--         --------->YAB1                 ------>ZmHOX2a(1)                    --------->ZAT6  <-------        <---------YAB1 --------->ZAT6  <---------------AGL15           --------->ANAC46      -------- ------>DOF2--------->YAB1 <---------ZAT14                             --------->ANAC58     --------- >ZmHOX2a(1)<---------ICU4 <---------ZAT18                             --------->ANAC58    <---------YAB1 -->TOE2(3)<---------YAB1  --------->ZAT14                         <-----------GT1--------->ANAC46---   aaagcatttgatgatcataacattaacagttcacttctcttcctctcttagtaaatcccattagccattttacaagctaagagtacacaacgtattataa  708200  Previous    Next  AGI:  At3g03100.1    Description:  NADH:ubiquinone oxidoreductase family protein. Identical to Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Arabidopsis Thaliana] (GB:Q9M9M9); similar to unnamed protein product [Vitis vinifera] (GB:CAO62196.1); contains InterPro domain NADH:ubiquinone oxidoreductase 17.2 kD subunit; (InterPro:IPR007763) Range:  from: 705388    to: 707658    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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