Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------At4g35610      --------->At4g35610      <---------ZAT2    <--------P                                                                                     <-   --------->At5g28300                                                                            ---   <---------MYB52(1)                                                                       ------->GAMYB  ------->GAMYB                <---------ANAC58--------->ANAC58                          --------->MYB52(1) ------->MYB52(1)              <---------ANAC58--------->ANAC46                        --------->DOF5.7(2) --------DOF5.7(2)        <---------O2         --------->ANAC58                    --------->MYB52(1) -------WRKY12           <---------ARR14(2)  <---------ALFIN1                <----------ID1--------->MYB46(3) -------WRKY38(1)  ----------->HVH21 <----------DOF2                     ---------->DOF2 <---------DOF5.7(2)   tcaacggtagctcagacacatttgacagacctggcatgtctttggtcacactcaacctgcaaaaaaaaaaaacataaaagaaacaaaacgataacgacca  634300                     <---------AHL20(2)                     --------->ATHB12                    --------->AHL20(2)                    --------->AHL20(1)               <---------MYB59                                                                     <-      <---------AHL20(2)                   <----------ID1                                    --------      --------->AHL20(2)    ------>ZmHOX2a(2)                                                <-------  --------->AHL20(2)<---------AHL20(2)     ----------->GT1                           --------->ZAT14  <---------AHL20(2)<---------AHL20(1)    ----------->GT1                            --------->ZAT18 --------AHL20(2)------>MYB46(1)        ---------->DOF2                              <---------ZAT14 ------>AHL20(2) ------>MYB83       ---------->DOF2      ----------->GT1      <---------ICU4<--------   ttaattttttaattagacctaatttattgatctaatacaaaagaaaggaaaaacagaggtcgtttaaacgtctacaaaaaacattactgcagtgatttat  634400                                                                                    --------->ARR11(3)                                                                                   --------->YAB1                                                                               --------->AHL20(1)                                                                               <---------AHL20(1)                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                           --------->AHL20(1)                       --------->WRKY38(1)                                 <---------AHL20(1)      --------->ANAC55(2)         <---------AHL20(2)                       <---------AHL20(2)     <---------TOE2(3) --------->WRKY12  <-----------GT1                --------->YAB1 <----------DOF2 --------YAB1          <---------ZAT18----------->GT1              --------->TOE1(3)<-----------GT1 ->AHL20(2)      --------->YAB1  --------->AHL20(2)                --------->TOE2(3)<---------ARR11(3) --AHL20(2)--------->ANAC58   --------->YAB1          --------->YAB1   <---------YAB1<---------YAB1 - --DOF2    --------->ANAC58  <---------YAB1--------->REM1(1) --------->YAB1--------->AHL20(2)       <   tgtcatttatgtaacgcaaatatagttgactctgataaaattgttacaactagtattcataagtcataaccttataattaattaattatctttctgtaaa  634500                       --------->ARR14(1)                       --------->GLK1(2)                      --------->ARR11(3)                      --------->ARR14(2)                <---------ANAC55(2)<---------DAG2                                <-----------GT1  <--               <-------TEIL        <----------DOF2                         <----------DOF2       <---          <---------AHL20(2)    <-----------GT1                       <---------DAG2<----------DOF2 <          --------->AHL20(2)<----------DOF2          <---------KAN4(2)<----------DOF2        --------   <-----------HVH21  <---------ARR14(2)         ----------->GT1   <-----------GT1  <---------DAG2--- -------->At4g35610   <---------GLK1(2)        --------->DAG2   ----------->GT1  ---------->ID1  ---- ---------At4g35610 ----------->ARR10         ---------->DOF2 <---------ATHB12  <-----------GT1  <---   ttagctgtcaaattaaatacataagattctcttttaacttttttgtcaaaaaggaaatattccaattagtaacttttctttttttcctttttctctgcaa  634600                        <------NtERF2 <-----------GT1       <---------ATERF1(1) -------ICU4           ------>NtERF2 ------ATHB12         --------->ATERF1(2) ---------YAB1        --------->RAP2.6(2)        --------->At4g35610 ---->CBF <-----------GT1                        <---------ZAT2 ------>YAB1          <---------DEAR3(1)         --------->ZAT2 ----->ICU4           <---------ATERF1(2)        <---------At4g35610          ---------->DOF2 ------ATHB51        <---------LBD16    ---------->DOF2     *TSS      ---------->DOF2 <----------DOF2   ttatgaccattttctctctcttagccggctctagagagagaagaaagacagagctgaaactcttgtaaaccaaaaaacacaaaagtctctttgttcaaac  634700                    --------->AHL20(2)                    --------->AHL20(1)                    <---------AHL20(1)                    <---------AHL20(2)                   --------->AHL20(2)                   <---------AHL20(2)               <---------RAP2.6(3)                     <---------AHL20(1)              --------->RAP2.6(2)                      <---------ARR11(3)           --------->ARR14(2)                  --------->DAG2          --------->HSFB2a(2)           <---------ARR14(2)                 ---------->DOF2          <---------HSFB2a(2)        --------->ANAC46                   --------->LBD16      <---------AHL20(2)      <---------ANAC46                    --------->ANAC46  <---------AHL20(2)   --------->ARR14(2)                  --------->ARR14(2)   --------->ATHB12      <----------ID1  ---   <---------ARR14(2)                  <---------ARR14(2)  <---------YAB1    --------->TOE1(2) <-----  --------->DOF5.7(2)                 <---------CCA1(2)--------->AHL20(1)   --------->MYB46(3)<------   actcgtttacgcgtagccgaaataaattttccaaaaacccatatccgaaaaagtcgatatatttattgaatttttggaaccaaggagacgaagaatttac  634800                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                         --------->bZIP60(1)                                                                                         <---------bZIP60(1)                                                                                      ----------->HVH21                                                                                     --------->At5g28300                                                     <---------MYB52(1)            <---------ANAC46                                                    <-------GAMYB                  <---------DEAR3(1)                                       --------->At4g35610                        <---------ABI4(1)                                       <---------At4g35610          ---------->ID1--------->ZAT14 ------>ANAC46  >>>>>>>>>TBF1         --------->ANAC58          <----------DOF2   ------>NtERF2------ ----REM1(2) >>>>>>>>>TBF1            --------->ANAC58        ------>ZmHOX2a(1)   <---------ZAT14---- -----GT1 >>>>>>>>>TBF1              --------->SPL7<-----------RAV1(1)   <---------CCA1(2)    <------   acggtttttgaagaagaagaagaagatgaagtataagcgtaagctaagtctctctgttgtcttcctctttgtcttctatctcgctgcggtgacttcagat  634900        <---------LBD16     ----------->HVH21                               ------>ZmHOX2a(1) --ZmHOX2a(2)                                        <----------DOF2 ----ARR14(2)                                    <---------RAP2.6(3) --->ARR11(3)                                   --------->DEAR3(1) --->ARR14(2)                                   --------->RAP2.6(2) ----ARR11(3)                                  --------->ATERF1(1)                             ------ ----AGP1        <----------DOF2           --------->LBD16                                     ------ --->AGP1 --------->LBD16 <----------DOF2 <---------ANAC58                                    <------ -->ZmHOX2a(2)<---------ARR11(3)          <---------ANAC58                               <---------WOX13(1) ---CCA1(2)   --------->ARR11(3)       <-----------HVH21           <---------YAB1     <---------YAB1   ctagagtctgaccggagagctttactcgctgttcgtaacagtgtccgtggccgtcctttgctatggaacatgagtgcttcttctccttgtaattggcacg  635000                        --------->ANAC58                        <---------O2                        --------->ANAC58    <------ZmHOX2a(2)                        --------->O2       --------->GLK1(2)                     ----------->HVH21     <-----------ARR10               <-----------HVH21           <---------ARR14(2)               <---------ARR14(2)          --------->ARR11(3)               --------->ARR14(2)          <---------AGP1             --------->LBD16               --------->ARR14(2)            <---------ANAC58               <---------ARR11(3) --------->ZAT18    <-----------HVH21     <---------CCA1(2) <---------ZAT18  <---------MYB46(3)      <---------ARR14(1)         <---------ATHB12 --------->ZAT14  <---------DEAR3(2)     --------->LBD16            --------->MYB52(1) <---------ZAT14 --------->ETT(1)       --------->ANAC46            ------>MYB83              ------- --->ANAC58 <---------ANAC58           <---------LBD16       <----------DOF2                  <------ --->ANAC58 <---------ANAC46--------->GLK1(1)  ----------->GT1      ------>MYB46(1)           <------ ---LBD16  <---------LBD16  <---------GLK1(1)------>ZmHOX2a(2) <-----------GT1                -------   gagtccactgcgatgcgggtcgggtcacggctctccgattacccggatctggtttattcggttctttaccaatcggtggtattggtaatctaacccagct  635100                                                                                ------->TEIL                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                                                                               <---------CCA1(2)                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                           <---------ANAC46                                                          --------->TOE2(3)<---------ANAC55(1)                                                        ------>MYB46(1)   --------->MYB52(2)     <----------DOF2                                    -------->P      <---------MYB52(1)       <--- -->ZAT2                                           <-----------GT1      <<<<<<<<<MYB98          <---- ---ZAT2    <---------LBD16                     --------->GLK1(1)      <-----------HVH21       ------ ---At4g35610                                   <---------GLK1(1)      <-------GAMYB   <---------TOE1(3) -->At4g35610 --------->LBD16       ------>ZmHOX2a(1)   ------>MYB83------>ZmHOX2a(1)  <---------TOE2(3)   taagactctttctctccggttcaattctctctctggtcctatcccttcggatttctccaaccttgttctcctccgttacttgtatcttcaaggtaatgcc  635200  Previous    Next  AGI:  At3g02880.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. Identical to Probable inactive receptor kinase At3g02880 precursor [Arabidopsis Thaliana] (GB:Q9M8T0); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G16590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17149.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 634660    to: 637291    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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