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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                             <------
                                                                                           ---------
                                                                                       --------->AHL20(1)
                                                                                       --------->AHL20(2)
--------->GLK1(2)                          ------->GAMYB                               <---------AHL20(2)
---------GLK1(2)                          <---------ALFIN1       <-----------GT1      --------->AHL20(2)
-->TGA1a                                 <---------At4g35610<---------ARR11(3)        <---------AHL20(2)
---O2                        <----------DOF2                <---------GLK1(2)      --------->YAB1 <-
-->O2                <----------DOF2 <-----------GT1        --------->ARR11(3)------->GAMYB<--------
---TGA1a       ------>ZmHOX2a(1) <----------DOF2      <----------DOF2      <-----------GT1--------->ICU4
 
cggaatctaaatcaactcctacttctttctctctttctttttgcaactcccccttaacttttagatttttacaaatttcaaccctataaaaaaattatga  546500
                                       <---------ARR11(3)
---YAB1                                --------->ARR11(3)            --------->TOE2(3)
>YAB1                               <-------MYC3            --------->ZAT14                <--------
--------ALFIN1                      ------->MYC3          --------->ANAC46              ---------->ID1
-ICU4          ------->TEIL       <-------TEIL <----------DOF2 --------->ANAC46  <---------TOE2(3)
 
cacacccttacccatatgaatcacacttactcataggcacatgatattctctttgtcatactctccactaaatctcaaaattttgagatttgttgttata  546600
                                                  --------->AHL20(2)
                                                  <---------AHL20(2)
                                                --------->TOE2(3)
                                      --------->YAB1
                                      ------->GAMYB                                 --------->ANAC46
                                      --------->TOE2(3)        --------->AHL20(2)   --------->ANAC58
                           <-----------GT1    <---------YAB1   <---------AHL20(2)   --------->ANAC58
-YAB1               <-----------GT1  --------->MYB46(3)     ----------->GT1     <-----------GT1   --
 
gacaattcatgtattctattgtttaacttatttcagttcaaccaaaattttcattaattcgaatattaaaaaaaaaaaactagtaacaggccattccaaa  546700
                                                                                   <---------AHL20(2)
                                                                           <---------O2
                                                                           --------->TGA1a
                                                                           <---------TGA1a
                                                                           <---------ANAC55(1)
                                                                           <---------bZIP60(2)
                                                                           --------->O2
                                                                           <---------ANAC58
                                                                           <---------ANAC58
                                        <-----------GT1                    =========================
                                      --------->KAN4(2)                   ----------->STF1
                   <---------------AtSPL8       =====================================bZIP_DOF
       --------->YAB1         <---------YAB1    <----------DOF2          <---------TGA2(2)       ---
      <---------YAB1        --------->YAB1     <---------DAG2           ----------->TGA1<---------YAB1
  <-------GAMYB    --------------->AtSPL3   <---------ALFIN1 --------->YAB1<---------ANAC46      ---
------->GLK1(2)    --------------->AtSPL8<-----------GT1<---------YAB1  ----------->HVH21        ---
 
gagtctgttatcaaaatgtgttttggtactattatgttgaatatttcccacctttcattttcattcataaacttggtgacgtggatttattttgatatac  546800
       <-------TEIL
    ----------->GT1           <------------CBF
   --------->DAG2           --------->AHL20(1)
 ---------->DOF2            <---------ARR11(3)
============bZIP_DOF        --------->ARR11(3)                 <----------ID1            ------->TEIL
------>ANAC58         <-----------GT1      <---------------------WRI1             <---------At5g28300
------>ANAC58      --------->YAB1    <---------At4g35610 ------------>CBF        <-----------GT1
------>ANAC46----------->GT1<---------AHL20(1)       --------->AtMYB61   --------->AHL20(2)---------
 
aagtaaaaggttcaatttgtaaatataacaaaatattgggagctatttcgataaaaccaaaacaatgggccaagaattaaaaatttaccatgaacatgag  546900
                          --------->YAB1
                          <---------ICU4                                      <---------TOE2(3)
                         <---------ATHB12                                   ---------->DOF2     <---
                       --------->WOX13(1)               <---------YAB1 <-----------------AGL1-------
                     <---------ATHB12             <-------TEIL    <---------ANAC58        <---------ARR11(3)
                   --------->WOX13(1)           <-------MYC2      <---------ANAC58        --------->ARR11(3)
                 <------ZmHOX2a(2)              ------->MYC2   --------->WRKY38(1)  ----------->GT1
            --------->ARR11(3)                  <-------MYC3<-----------RAV1(1)    --------->DAG2
            <---------ARR11(3)                  ------->MYC3<---------ZAT6 <---------ATHB12<------ZmHOX2a(2)
>TOE1(2) *TSS<------ZmHOX2a(2)               ----------->RAV1(1)<<<<<<<<<<WRKY63  ---------->DOF2 --
 
agagtgagagaagaagatcgatcaatcaatcatcaaactctctgtgtgccacatgcattactactgttgacttgttcaataaaggtaaagtaagatcaat  547000
                                                                  <---------ANAC58
                                                                  <---------ANAC58
                                                                --------->ICU4
                                                           <------NtERF2
                                                          --------->LBD16
                                                          <---------MYB46(3)
                                                         <---------ANAC46
                                                        <---------At4g35610
                                                        <---------LBD16
                                                        <------NtERF2
                   --------->ANAC46                    ------>NtERF2
                   --------->HSFB2a(2)                <---------ANAC46
                   <---------ETT(1)                   <---------DEAR3(1)
         <----------DOF2             <---------ARR14(2)<---------ATERF1(1)
      ----------------------->TaNAC69(2)              <---------RAP2.3(3)
    --------->HSFC1(2)               <---------ARR11(3)<---------RAP2.6(1)
    --------->HSFB2a(1)    <---------ARR14(2)         <---------RAP2.3(2)
    <---------HSFB2a(1)    --------->ARR14(2)         <---------ATERF1(2)
    <---------HSFC1(2)   --------->DEAR3(1)           --------->ATERF1(2)
   --------->ARR14(2)   <------NtERF2--------->ARR14(2)<---------ERF1
   <---------ARR11(1)  ------>NtERF2 --------->ARR11(3)<---------RRTF1(1)
   ------->TEIL    <---------ATERF1(2) ------>ZmHOX2a(2)--------->ATERF1(1)
   <-----------ARR10  <---------ALFIN1--------->GLK1(1)<---------ORA47(2)
   <---------ARR14(2) --------->DEAR3(1)              <---------RAP2.6(2)                  ---------
   --------->GLK1(2)------>NtERF2    <---------AGP1   <---------DREB2C(2)               --------->ANAC46
  <---------ARR14(1)--------->LBD16 <---------CCA1(2) <---------RRTF1(2)           <-------GAMYB
  <---------CCA1(2)<---------HSFB2a(2)<---------GLK1(1)<---------RAP2.3(1)        --------->MYB52(2)
------LBD16 <---------ANAC58 ------>ZmHOX2a(2)        <---------RRTF1(3)          <---------MYB46(3)
-->WOX13(1) <---------ANAC58<------ZmHOX2a(2)    <---------O2   <---------YAB1  <---------MYB52(1)
------->LBD16     <---------LBD16  <---------MYB46(3)--------->RAP2.6(3) --------->At4g35610     <--
 
ccggcgaatcttctttcgttttccggcaccgatctcggtggatctccgattcacatggcggcggataatgcttatctgatgcagtttgttgacgaaacct  547100
                                      <---------ARR14(2)
                                      --------->ARR14(2)
                                      --------->GLK1(2)
                                      <---------ARR11(1)
                                      <-----------ARR10
                                      ------->TEIL
                                     <---------ARR14(1)
                                  <------NtERF2
                                 --------->LBD16                                                ----
                                 ------>NtERF2                                                  <---
          --------->ARR14(2)    --------->ATERF1(2)                                           ------
       ------->GAMYB            <---------DEAR3(1)                                           -------
 <-----------GT1                <---------ATERF1(2)             <-----------GT1 --------->LBD16<----
>ARR14(2) <---------ARR11(1)   <---------LBD16          --------->TOE2(3)     <------NtERF2 <-------
--------DOF2              <----------DOF2           <---------MYB52(1) <---------O2  <-----------GT1
 
ctttttacaaccgaatcgttctgagtcatcttttgccggcgaatctatgggaacccttacctcattttctccagacatggctccgaaattacctcgccgg  547200
                                                                            --------->ARR11(3)
                                                                        ---------->DOF2
                                                                      --------->HSFB2a(2)
     <---------ZAT14                                                  <---------HSFB2a(2)
----->ARR14(2)             <-----------RAV1(1)                --------->WRKY12
------ARR14(2)           ----------->RAV1(2)                 --------->DOF5.7(2)
--->LBD16                ------>ZmHOX2a(1)                  --------->TOE2(3)             <---------DAG2
-->ANAC46         --------->LBD16               --------->TOE1(3)   ------>MYB46(1)       <---------
--NtERF2        <---------LBD16                 --------->TOE2(3)   ------>MYB83    <----------DOF2
--LBD16      <---------At4g35610      --------->REM1(1)   <---------TOE2(3) <---------ARR11(3)     <
 
aaccctactatacttcatctccggtttcctctggtgcttctacatctattaccttaaaatcaacgtttaccttcccaaaggtctcgactttcacttttgt  547300
                                                                         --------->At5g28300
                                                                        ----------->GT1
                                                                      <---------ZAT14
                                            <---------TOE2(3)         --------->ZAT14
                                          ---------->DOF2           --------->ZAT14
        <----------DOF2                  <---------AHL20(2)         <---------ZAT14
       <---------ANAC58                 --------->AHL20(2)     --------->ZAT14
 <---------YAB1                      <---------------AGL15     <---------ZAT14
-DOF2  <---------ANAC58              --------------->AGL15     --------->ZAT18
-----------GT1  <----------DOF2   <-----------GT1           <---------ANAC46            <---------ANAC46
 
attcactattgcttaatcgctttctatgttatcgatttttcaatttaaaggaagagggtttcttcgtgtactgtacagtaatttggatttgatgtggata  547400
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AGI:  At3g02580.1   
Description:  STE1 (STEROL 1); C-5 sterol desaturase. Identical to Delta (STE1) [Arabidopsis Thaliana] (GB:Q39208;GB:Q8L9C0;GB:Q9SWU4;GB:Q9SYS2); similar to delta 7-sterol-C5-desaturase, putative [Arabidopsis thaliana] (TAIR:AT3G02590.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96921.1); contains InterPro domain Sterol desaturase; (InterPro:IPR006088)
Range:  from: 546910    to: 548802    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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