Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ---------->ID1               <---------ANAC58               <---------ANAC46               <---------ANAC58             <---------ARR11(3)                   --------->YAB1                <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->ANAC46                        --------->TOE2(3)                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->ANAC58               <---------ANAC58                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->ANAC58    <----------DOF2     <----------DOF2             <---------TOE2(3) --ARR11(3)  --------->ARR11(3)    <---------ANAC58  --------->YAB1   ---------->DOF2   tctcccaagctacaatgtcttgttgtctttatttcatacttgtctgccttaagaatcatatagaagaaactctaaaggtttttttttttttttttttttt  481500                                                                                      <------MYB46(1)                                                                                      <------MYB83                          --------->HSFC1(1)                                         --------->MYB46(2)                          <---------HSFB2a(2)                                        <---------AtMYB61                          <---------HSFC1(1)               --------->DAG2            <---------MYB46(3)                      <----------DOF2                ----------->GT1             <------MYB83                    <---------------AGL15         <------ZmHOX2a(1)              <------MYB46(1)    <                   ----------------->AGL2        <------MYB46(1)             --------->ARR14(2)     -            <---------MYB46(3)                   <------MYB83                <---------ARR14(2)     <       <---------TOE2(3)  --------->HSFB2a(2)   --------->MYB59         ---------->DOF2            <-     ---------->DOF2--------------->AGL15      <--------P ---------->DOF2   <------ZmHOX2a(1)     <--   gaaactctaaaggtttgttcttccctttctagaatgctgcataatacaggtaggaacgtataaagtgtaattgcaaaaggatttggtttggtgatgaatt  481600     <-------GAMYB     --------->LBD16    <---------ANAC46 ---------ARR14(2)                     ------>NtERF2                     <------MYB46(1) -------->ARR14(2)                <---------At5g28300                   --------->MYB59 ---------GLK1(1)   <-----------GT1    --------->LBD16     ----------->GT1 <<<<<<<<<MYB2           -- -----ZmHOX2a(1) <---------ARR14(2)   --------->LBD16    <---------ANAC46<------MYB83              -- -------YAB1     --------->ARR14(2)  <---------LBD16     <---------bZIP60(2)                       --   aggattccgttgaagtgagaattcactatttgggtttaccccggcttaaatcaaatgtgatgtgtaaaacgagtttggttttcaagttttcaaacaaaaa  481700           --------->At5g28300                                                                     --         --------->ANAC46                                                                         ---         --------->ANAC55(1)                                                                    -----         --------->ANAC58      <---------AHL20(2)                                               <----         --------->ANAC58     <---------ARR11(3)                                               ------       --------->MYB52(1)     --------->AHL20(1)                                               <----- ------->ANAC46               <---------AHL20(1)                         --------->bZIP60(1)   <----- ------->ANAC58     <------ZmHOX2a(1)                                    <---------bZIP60(1)   ------ ------->ANAC58   <---------TOE2(3)<-----------GT1           <---------ATHB12                  ------   cacacaaacacacggtatttgaggaaagactatatattttctctgtatgaaaatcaaattccaatgaccaatatgatgtcaagagaaaacaattcaagat  481800                        <---------ANAC58                        <---------ANAC58                ------>MYB83   ------>MYB83                ------>MYB46(1)--------->MYB52(1)              --------->DEAR3(1)              <---------MYB55(2)              --------->AtMYB61------>MYB46(1)              <---------MYB111(2)           ----------------->AGL1              <---------MYB46(2)          --------->ZAT18              --------->MYB46(3)       --------->ALFIN1            --------->ANAC46  ----------->HVH21           <---------ALFIN1   --------->MYB55(1)           --------->AtMYB61 <---------MYB59------------>CBF --------->MYB46(3) <----------DOF2   <------ZmHOX2a(1) ------->MYB52(1)  <---------DAG2  <-----------RAV1(2) ------>TOE1(2)<---------ALFIN1---------->DOF2                                       ----------->GT1 ---->CCA1(2) <---------MYB111(1) --------->TOE1(2)                                ----------->GT1  < --ZmHOX2a(2)------>MYB46(1)<---------ANAC55(2)                                    <----------ID1  <- --->ARR14(2)------>MYB83 <-----------GT1--------->ALFIN1   <----------DOF2      --------->DAG2 <---- ----ARR11(3)--------->ANAC58<---------MYB52(2)             --------->TOE2(3)<----------ID1  -------- ----ARR14(2)--------->ANAC58<---------MYB46(2)      ------------>CBF     --------->DAG2     <------- --->AGP1 --------->MYB46(3)--------->ANAC55(2)     <-----------GT1      ---------->DOF2  --------->AHL20(2) --->ARR11(3)--------->ANAC46<---------MYB111(1) <---------ICU4  <----------ID1 ---------->DOF2 <----   ccaacgactactaccacccacccttttcttacctaacgcaggagtggccaattttgacaatactttaacaacaaaaaaagggaaaaggagaaaaaaatat  481900                                                                                                  ===     *TSS                                                                                         <--   <----------DOF2                                           <---------ICU4                       --- -----------GT1       --------->GLK1(2)      <---------ARR11(3)                                   --- --------YAB1         <-----------ARR10      <---------ARR14(2)                                   --- -----YAB1       <---------ANAC46            --------->ARR11(3)                            ------>ZmHOX2a(1) ->AHL20(1)    <---------MYB46(3)            --------->ARR14(2)                    <-----------GT1--- --AHL20(1)   --------->ALFIN1  <-------TEIL<---------CCA1(2)--------->YAB1     <---------ICU4<------ -----AHL20(2)<---------AtMYB61<---------MYB52(1)--------->At4g35610           --------->ICU4 ------>ZmHOX2a(1)   tattactttggtagcagtggtgcgaatcagaccgttcatttgctatatatctgctacaaacaaacatcactaatctctgcaatttttactctcctccttc  482000                            --------->KAN4(2)                           <---------HSFB2a(1)                           --------->HSFB2a(1)        ------>ZmHOX2a(1)  <---------HSFC1(2)     ---------->ID1        --------->HSFC1(2)  <----------DOF2       <------ZmHOX2a(1)         --------->CCA1(2) ============bZIP_DOF--------->HSFB2a(2)         --------->ARR14(2) -------O2           <---------HSFB2a(2)       --------->ANAC46 ------>TGA1a        --------->HSFC1(1)       --------->LBD16                          <----------DOF2 ------>ANAC46 --------->AHL20(2)             ------>NtERF2               --------->YAB1 ------>ANAC55(2)    <---------HSFC1(1)      --------->ANAC46            <---------ATHB12 ------>O2     <---------ICU4               <---------LBD16              <------ZmHOX2a(2)       <--- -----HVH21    <---------AHL20(2)         --------->ARR14(2)  --------->MYB52(2)       <---------DAG2   acgtcttttcctcttaattttttctaggaaaattctcaaatccatctccgcgatacgaacaggtttgtttctccgatcatactctctctctttttgtttt  482100                             --------->KAN4(2)                            <---------MYB46(3)                           <---------WOX13(1)                        <---------YAB1                                                   <----------DOF2                      <---------At4g35610                      <---------MYB59        <-----------GT1                  <------MYB46(1)                            ------->TEIL            <-----------GT1                  <------MYB83                             --------->ZAT18           <---------AHL20(2)                 --------->MYB111(1)             --------->AHL20(2)              --------->AHL20(2)                 --------->MYB59                 <---------AHL20(2)          --------->ICU4   -------     <---------ATHB12<---------ARR14(2) <---------DAG2    --------->ALFIN1   --------->AHL20(2)   --------->WOX13(1)--------->ARR14(2) <----------DOF2  <---------------AtSPL3  <---------AHL20(2) --------->LBD16 <---------AtMYB61--------->WOX13(1)     <---------------AtSPL8 <---------AHL20(2) --------GT1     --------->MYB46(2) <---------ATHB12    <---------ANAC46     <---------AHL20(2)     -   ttccccaatcaattttggtttggtatctgattgttccaatcacttttcgatataaatgatgtgtaccgaaatttcagaaaaaattatttaacttttatgt  482200                                                                      <---------HSFB2a(1)                                                                      --------->HSFB2a(1)                                                                      --------->HSFC1(2)                                                                      <---------HSFC1(2)                                                                     ------->TEIL                                                                     <---------ARR14(2)                                                                     <-----------ARR10                                                                     --------->ARR14(2)                                                                     <---------ARR11(1)                            --------->KAN4(2)                       <---------CCA1(2)                     --------->LBD16                    <----------DOF2 -->ANAC55(2)        <-------GAMYB                ------>ZmHOX2a(2) <---------ARR14(1) ----->ZmHOX2a(2)   <---------ANAC46  <-----------RAV1(1)   --------->ANAC55(2)   gatccagcatttttgtgtgattccgttgaaaattcccattatgttgtttagatcggtgttttaagtaatcgaatcttcgctcttgttgttagtgtatgcc  482300                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                      <---------ARR14(2)                                                              <------ZmHOX2a(2)                                                             <-----------ARR10                                                             <---------AGP1                                                             <---------ARR14(3)                                                             --------->ARR14(3)         <----------DOF2                                     <---------ARR14(2)        ------>ZmHOX2a(2)                     <---------GLK1(2)------>ZmHOX2a(2)      <---------ARR11(3)                 --------->ATHB12    --------->ARR14(2)                <-----      --------->ARR11(3)                <---------AHL20(2)   <---------ARR11(3)                <-----  ------>ZmHOX2a(2)                    <---------WOX13(1)    --------->ARR11(3)                <-----  --------->YAB1                 --------->ICU4   <---------ANAC46    --------->ARR14(2)    <-------- <------ZmHOX2a(2)     <---------TOE2(3)--------->AHL20(2) ----------->ARR10       <---------ANAC46   acgatcgtgatctttttttttttttgagatttgtcatgttgatttattgattctgtgttcgaagatcttggggatcttatttctggtttgtatcgttgcg  482400  Previous    Next  AGI:  At3g02350.1    Description:  GAUT9 (Galacturonosyltransferase 9); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. Identical to Uncharacterized glycosyltransferase At3g02350 [Arabidopsis Thaliana] (GB:Q9FWA4); similar to GAUT8/QUA1 (GALACTURONOSYLTRANSFERASE 8, QUASIMODO1), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT3G25140.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96860.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73730.1); Range:  from: 479013    to: 481481    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g02360.1    Description:  6-phosphogluconate dehydrogenase family protein. similar to 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT5G41670.1); similar to 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT1G64190.1); similar to 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT5G41670.2); similar to hypothetical protein [Cleome spinosa] (GB:ABD96861.1); similar to 6-phosphogluconate dehydrogenase [Glycine max] (GB:BAA22812.1); similar to 6-phosphogluconate dehydrogenase (GB:AAB41553.1); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal; (InterPro:IPR006114); Range:  from: 481905    to: 484154    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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