Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------AHL20(2)                                                                 <-               <---------YAB1                                                              --------->WRKY18(1)            <---------YAB1                                                                <----------         <---------MYB52(1)                                                         --------->ATHB12<        <-------GAMYB                                                              --------->AHL20(2)       ----------->GT1                                                             <---------AHL20(1)       --------->MYB52(2)                        --------------->AGL15             <---------AHL20(2) ---------GT1 <---------AHL20(2)           <---------ATHB51----------->GT1     <---------AHL20(2)  == -GT1 <-------TEIL                         --------->AHL20(2)     <-----------GT1  --------->AHL20(1)   tcactaggttcgttatttttattttttgcaaatttcaatatacaaattattcattttagagtagtaatttacccatggtttttattttattgggtcaaac  337600                     <------NtERF2                     --------->ALFIN1                   <---------ANAC58                   <---------O2                   <---------TGA1a                   <---------bZIP60(2)                   <---------ANAC46                   <---------ANAC58                   --------->O2                --------->ALFIN1               <-----------HVH21               <-------MYC3               ------->MYC3              <---------ANAC58              <---------ANAC46              <---------ANAC58              --------->ALFIN1           <---------AHL20(1)              ===============================================bZIP_DOF              <---------O2               <---------ARR11(3)              <---------TGA1a            --------->ARR11(3)              --------->O2               --------->AHL20(1)              --------->TGA1a   <---------ANAC58             ------>NtERF2      <---------ANAC55(2)   =====================bZIP_DOF--------->ANAC55(2)             <---------WOX13(1)   <----------DOF2 ==========================================bZIP_DOF                     <----------   =====================bZIP_DOF<---------ANAC58              --------->ATHB12           --------->ATHB12 -----ZmHOX2a(1)----------->HVH21  ------->TEIL              <---------YAB1             <---------YAB1 -HVH21  ------>ZmHOX2a(2)---------->TaMYB80                 --------->ICU4             --------->ICU4 ---------ARR11(3)<------NtERF2<---------TOE2(3)        --------->ANAC55(2)  <----------DOF2 ===============HOX2a_HOX2a   <-----------GT1     <----------DOF2            <---------DAG2<---------WOX13(1)   aggaactttgatcgacgcgtggcgtgggaatataacgtatcaatattttgggctttttaagtgatgattgttttgtaagctttttgagtgatgattgttt  337700                                                                    <---------AHL20(2)                                     <------------CBF           <------------------------ANAC81                   <----------DOF2 <---------AHL20(2)      ------->TEIL      <------MYB83 --CBF       ------>NtERF2  <----------DOF2   <----------DOF2  <---------YAB1<------MYB46(1)        <   gatgggcttattaggcgactgttttatgggcttttagttaattgcaccctttgggcttatgtactctgatttttttgtttggttttttagttgtatttgt  337800                                                                                      <---------ZAT6                                                                 <---------ZAT14<---------AHL20(1)                                                             ------>MYB83       <---------ARR11(3)                    --------->DAG2                           ------>MYB46(1)    --------->AHL20(1)                   --------->DAG2                          <---------MYB46(2)   --------->ARR11(3)  <          --------->ZAT18                           <---------MYB52(1)     ------------>CBF        --          <---------ZAT18             <---------ATHB12     <---------MYB111(1) <-----------TBP   <---        --------->HSFB2a(2)          <------------CBF<---------ICU4        <------ZmHOX2a(2)    <----        <---------HSFB2a(2) <------------CBF<----------DOF2<---------MYB59<---------ARR11(3)   ------ -----------GT1   ---------->DOF2 ------------>CBF  --------->ICU4        --------->ARR11(3)  <------   aatttctgttcgagcactaaaaaaggggaacattgtcccaattgttctttcgccattagtaccaaactaaactggagatcaatatatagtattagtatga  337900                               --------->ARR14(2)                               <---------ARR14(2)                            --------->ANAC46                           <---------HSFB2a(2)                           --------->HSFB2a(2)                       <---------ICU4                      --------->ICU4                      <---------ATHB12       <------------CBF--------->YAB1                             <---------SPL7 ------------CBF      <---------YAB1                             <---------ANAC58                  -- ------->ATHB12  <---------ANAC46  --------->ZAT14       <------MYB83        --------->ATHB12      <- ------WOX13(1)  <---------ANAC55(2)       <---------AHL20(2)    <---------ANAC46                  <- --------CBF     <---------ANAC58  <---------ZAT14       <------MYB46(1)   <----------DOF2       ---- --->ATHB12      --------->ANAC55(2)      --------->AHL20(2)     <---------ANAC58                <--- ---YAB1         <---------ANAC58  --------->ZAT18      --------->MYB59 ------->TEIL       <---------ATHB12   ttgattgtatattggggtttcgtaatcatcgcgaaactgcagtataaaattcgaaagtttggtttaggcgtatgaaactttattgcaactctaatgaagt  338000                                            --------->DEAR3(1)                                           <---------At4g35610                                       <-----------TGA1                                       <-----------HVH21                                     --------->MYB46(3)                                     <------------AtMYB77                               ----------->HVH21 <------NtERF2                               <---------ETT(1) ----------->RAV1(1)                            <---------ARR14(2)  ------>NtERF2        --------->ALFIN1                            --------->ARR14(2) <---------ETT(2)    <---------ANAC46                           --------->At4g35610 ----------->HVH21   --------->O2                           --------->ZAT2  <---------LBD16      ----------->HVH21                           <---------ZAT2  --------->ATERF1(1)  --------->ANAC46                           <---------At4g35610 --------->DEAR3(1)  <---------O2                           <------NtERF2   --------->At4g35610  --------->ANAC58                           --------->ATERF1(1)--------->RAP2.3(1)  <---------bZIP60(2)          <----    --------->ANAC58      <---------ATERF1(1)--------->LBD16<---------ALFIN1          <---------YAB1    --------->ANAC58  --------->ANAC46------->GAMYB        <---------REM1(2)         --------->TOE2(3) ------->At4g35610    <---------RAP2.6(2)  --------->DEAR3(2) --------->ANAC46      --------->ATHB12 -----NtERF2         --------->RAP2.6(3)----------->HVH21--------->ANAC46           <---------ICU4 --------At4g35610  --------->MYB52(1)--------->ANAC46  --------->HSFB2a(2)    --------->ANAC58 <---- ----->ZAT18      <---------DAG2------>NtERF2<---------ATERF1(1)--------->ANAC58    <--------HAHB4 -- ------ZAT18      <----------DOF2 --------->MYB46(3)    <---------HSFB2a(2)    --------->ANAC58 <----   ccgctcacgaactcttgccactttacggcagctccgacaaccgtcaccggcgacatttctcgacacacgacgtgttgatgctcgcatcattaaaactggc  338100          <---------ANAC58          <---------ANAC55(2)          <---------ANAC46          <---------O2          <---------TGA1a          --------->O2                         <------ZmHOX2a(1)          <---------ANAC58                  ==============================RAV          --------->ANAC55(2)               <---------LBD16          <---------ANAC55(1)               <-----------RAV1(2)                --------->SPL7         <-------TEIL                 <---------HSFB2a(1)                    <---------SPL7        --------->CCA1(2)             --------->HSFB2a(1)            --------->ANAC58       <---------ARR14(2)             --------->HSFC1(2)             --------->ANAC58       --------->ARR14(2)             <---------HSFC1(2)             --------->ANAC46       --------->ARR11(1)            <---------ARR11(3)              --------->ANAC55(1)       <---------GLK1(2)             --------->ARR14(2)            <---------ALFIN1 <---------REM1(2)                   --------->ARR11(3)           --------->ZAT14 -----ANAC58 <-----------HVH21       <-----------ARR10         --------->At4g35610 -----ANAC46<-----------RAV1(1)      <---------ARR14(2)        <---------At4g35610 --------->HVH21                    <------ZmHOX2a(1)         <-----------RAV1(1)                   - -----ANAC58--------->ALFIN1     --------->HSFB2a(2) --------->WRKY18(1)    --------->ALFIN1        <   ttcgacacagatacgtgtcgctccaatttcatcgtcgaggaccttctcaggagaggtcaagtttctgctgcacgcaaggtgtacgacgaaatgcctcaca  338200                                  --------->O2                                  --------->TGA1a                                  <---------O2                                  <---------TGA1a                                  ==============================================bZIP_DOF                                  <---------ANAC55(2)                                      --------->ARR14(2)                                  <---------ANAC46                                         <---------ARR14(2)                                  --------->ANAC55(2)                <----------DOF2  ----------->RAV1(1)                               ----------->HVH21                     <---------DAG2  --------->ANAC46                             --------->LBD16                         ================================                           <---------LBD16                        --------->ARR11(3) --------->ANAC58                        <---------GLK1(1)                         <---------ARR11(3) --------->ANAC58                        --------->GLK1(1)                     --------->LBD16        ----------->HVH21                      <---------ICU4 --------->REM1(2)     <---------ZAT18           <---------ETT(1)             --------->AtMYB61<-----------HVH21            ------>NtERF2   ---------->ID1 <---------ZAT14   <<<<<<<<<TAC1      --------->ATHB12                    --------->DEAR3(1)--------->ANAC58      <-- -------->ZAT14      <---------YAB1------->MYC3          <---------At4g35610--------->ANAC58     <--- ---------ZAT14      --------->ICU4<-------MYC3          --------->At4g35610--------->ANAC46     ----   agaacactgtctccaccaataccatgatttccggtcacgtgaagacgggtgatgtttccagcgcccgagacctttttgacgcaatgcccgacagaactgt  338300            --------->YAB1        --------->ARR14(2)          --------->ARR11(3)    --------->LBD16          <---------ARR11(3)   --------->ANAC46     --------->WRKY38(1)       --------->ANAC58     --------->ZAT18           --------->HSFB2a(2)   <-------MYC3                --------->LBD16   <-------MYC2                --------->ANAC58   <-------PIF5               <---------LBD16   ------->PIF5            --------->ANAC58   ------->MYC2            --------->ANAC58   ------->MYC3           --------->SPL7  <---------O2          <---------SPL7  --------->O2         <------MYB46(1)                                           --------->ARR14(2)  --------->TGA1a      <------MYB83---------->DOF2                               <---------ARR14(2)  <---------bZIP60(2)  <---------MYB46(3)                                        --------->ARR11(3)  <---------TGA1a     --------->ALFIN1                                      --------->ALFIN1  ============================================bZIP_DOF                  <---------At4g35610  <---------ANAC55(2) <---------AtMYB61                                 --------->At4g35610  <---------ANAC46    <---------------AtSPL3                          <-----------RAV1(2) ===========bZIP_DOF<---------ANAC58                                <-----------HVH21         ------- ---------HVH21--------->ATHB12<---------HSFB2a(2) ------->TEIL    --------->ANAC46        ========== ------bZIP60(1)    <---------ANAC46    <---------ALFIN1      <----------DOF2    <---------ARR11(3)-- ----->bZIP60(1)    <---------ANAC58--------->MYB46(3)<----------DOF2<---------MYB52(1)    ------>ZmHOX2a(1)   tgtcacgtggactatcttgatggggtggtacgcccggaacagccacttcgatgaagctttcaagcttttccgtcagatgtgcaggtcttcttcctgtacc  338400                                                                   <-----------HVH21               <----------DOF2                                    <------MYB83         <-----------HVH21                                        <------MYB46(1)        --------->bZIP60(1)                                       <---------DEAR3(2)               <-        <---------bZIP60(1)                                      <---------MYB46(3)     <---------MYB52(1)      --------->YAB1                                  --------->HSFB2a(2)              <---------RAP2.6(3)     <---------ATHB12                                 --------->ANAC46                 <-----------HVH21     <------ZmHOX2a(2)                   <---------ATHB12       <---------MYB55(1)     ------>NtERF2    <-----------HVH21                    ----------->TGA1---------->DOF2  <-------TEIL<---------ATERF1(2) >TEIL<---------ICU4                 <------NtERF2   <---------LBD16 <-----------RAV1(2)<------NtERF2 ===========HOX2a_HOX2a  <----------DOF2 ----------->HVH21     <-----------HVH21<----------DOF2------ ---->NtERF2  <---------DAG2<-----------GT1          --------->LBD16<---------MYB52(1)--------->ATERF1(2)   ctgcccgatcatgtcacctttactacgcttttaccaggctgcaatgacgctgttccccagaacgcggtcggtcaggttcatgcttttgccgtcaagttag  338500  Previous    Next  AGI:  At3g02010.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G27610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49094.1); similar to hypothetical protein OsI_000011 [Oryza sativa (indica cultivar-group)] (GB:EAY72164.1); similar to Pentatricopeptide repeat domain containing protein, putative [Solanum demissum] (GB:AAU90328.2); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 337972    to: 340449    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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