Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
----------->
GT1
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
--------->
AHL20(2)
<---------
AHL20(2)
--------->
TOE2(3)
<--------
ATHB1
--------->
ANAC58
--------->
ATHB51
--------->
ANAC55(2)
<---------
ICU4
--------->
ANAC55(1)
--------->
ICU4
<---------
ANAC55(2)
<---------
YAB1
--------->
ANAC58
--------->
YAB1
<---------
ARR11(3)
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<---------
ICU4
<----------
DOF2
------->
TEIL
--------->
ANAC46
----->
GLK1(2)
--------->
ARR11(3)
--------->
TOE2(3)
--------------->
AtSPL8
-----
GLK1(2)
<---------
ANAC55(2)
--------->
GLK1(2)
<---------------
AtSPL8
atctatataataatttcgtaaaatctttacaaattttaaaattctgtaactttagtttgctatctatgtaatgtacccctattatacgtaaacagcaatg
197600
--------->
ALFIN1
<--------
ATHB1
<---------
ATHB12
--------->
ICU4
--------->
RAP2.6(2)
<---------
YAB1
--------->
At4g35610
<------
MYB83
--------->
DAG2
<------
ZmHOX2a(1)
<---------
REM1(1)
<---------
ATHB12
<------
ZmHOX2a(1)
<---------
TOE2(3)
--------->
ANAC58
--------->
YAB1
----------->
GT1
--------->
ICU4
--------->
ANAC46
<------------
ATHB5
<---------
ANAC55(2)
----------->
GT1
----------------->
AGL1
<-----------
RAV1(2)
<---
--------->
ANAC55(2)
------->
TEIL
<-----------------
AGL1
--------->
At4g35610
<---
--------->
MYB59
<------
MYB46(1)
<---------
YAB1
--------->
ANAC58
--------->
ATHB12
<------
NtERF2
taagttatgtaagaaataatgtaggttaagaaacagtgatgaatgtaaaaatgtatac
ccaataaggggcaatgataggagcaggagcggcaaaaactgg
197700
--------->
ANAC58
--------->
ANAC58
<------
NtERF2
--------->
ANAC58
--------->
ANAC58
<----------
ARF1
<---------
MYB46(3)
<------
NtERF2
<-------
GAMYB
----------->
HVH21
--------->
ALFIN1
<---------
ARR14(2)
--------->
MYB55(2)
--------->
ARR14(2)
<------
ZmHOX2a(1)
<---------
MYB46(3)
--------->
ANAC55(2)
--------->
ALFIN1
<------
ZmHOX2a(1)
--------->
MYB55(2)
<---------
ANAC55(2)
--------->
MYB52(1)
<---------
At4g35610
--------->
ALFIN1
<---------
ANAC46
--------->
ARR14(2)
--------->
At4g35610
<---------
ANAC58
<--------
<---------
LBD16
<---------
ARR14(2)
<------
ZmHOX2a(1)
<---------
ANAC58
<---------
DEAR3(1)
------
ANAC58
--------->
ANAC58
--------->
ALFIN1
<---------
ANAC46
--------->
MYB52(1)
------
ANAC58
--------->
ANAC58
<------
ZmHOX2a(1)
>>>>>>>>>
TBF1
--------->
ALFIN1
--------->
ALFIN1
ctcgttacggataagcgttggaacggaacgggaagacgaggaggaggaagatgaggaagaagaagaggcgggtgggaggcaagcgacggtggaagaagta
197800
---------->
DOF2
=================
bZIP_DOF
<---------
TGA1a
<---------
ANAC46
<---------
ZAT14
<-----------
RAV1(1)
--------->
HSFB2a(2)
<xxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<---------
MYB46(3)
<-
<---------
HSFB2a(2)
--------->
ZAT14
<---------
DDF1
<--
<---------
LBD16
--------->
DAG2
<------
NtERF2
--------->
ETT(2)
---
<---------
ARR14(2)
---------->
DOF2
--------->
LBD16
<---------
ETT(2)
--------
--------->
GLK1(2)
=================
bZIP_DOF
--------->
At4g35610
---------->
DOF2
--------->
ARR14(2)
<------
ZmHOX2a(1)
<---------
LBD16
--------->
SPL7
<---------
ANAC46
<
-------
AtSPL8
<xxxxxxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<------
ZmHOX2a(1)
<------
NtERF2
----
cgaagagagagtttctggagagaagattgagaaggagaaagtgaagtgagaaagaagccggagagaggagcggtcgacatttgttggcgaagagaagcgg
197900
-------
--------
--------
<-------
--------->
ARR11(3)
<---------
HSFC1(2)
<------
MYB83
--------
ARR11(3)
--------->
HSFC1(2)
<---------
MYB46(3)
-------
GLK1(1)
<---------
At4g35610
----------->
GT1
------>
GLK1(1)
--------->
CCA1(2)
--------->
ANAC58
<------
MYB46(1)
->
At4g35610
----------->
ARR10
--------->
ANAC58
<---------
AtMYB61
------
ZmHOX2a(2)
<---------
HSFB2a(2)
*
TSS
--------
------->
ARR10
<---------
ARR11(3)
--------->
HSFB2a(2)
<------------
CBF
agatcagagagagtgagatatgtgtatttatagttagaactaagactcttatggaagctactatatacttaagtgaataat
gggattggttgaaagattt
198000
----------->
GT1
<---------
ANAC46
--------->
MYB52(1)
<---------
DEAR3(1)
---------->
DOF2
<---------
ANAC46
<---------
ZAT2
----------->
GT1
--------->
ALFIN1
<---------
At4g35610
-->
CCA1(2)
<---------
MYB46(3)
--------->
At4g35610
->
ARR14(2)
--------->
ALFIN1
---------->
DOF2
--------->
At5g28300
<-----
->
ARR11(1)
--------->
ICU4
<------
ZmHOX2a(1)
<---------
LBD16
<-----
--
ARR14(2)
--------->
WRKY18(1)
<---------
TOE1(1)
--------->
ZAT2
<------------
MYB.PH3(2)
->
ARR11(3)
<---------
GLK1(2)
<---------
AtMYB61
--------->
MYB52(1)
<---------
ANAC46
<---------
gggagtttaaaagaacggagtctcatggtcatggtgaggttgtgggaacgaggataacgaaagcgatagctgcggtgaataacaaactttcttcttttct
198100
<---------
ANAC55(1)
<---------
ANAC55(2)
<---------
ANAC46
<---------
ANAC58
--------->
ANAC55(2)
----------
<---------
ANAC58
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR11(3)
----
ANAC58
<---------
ARR11(3)
<----------
DOF2
<---------
AHL20(2)
----
ANAC58
--------->
At4g35610
--------------->
AtSPL8
<----------
DOF2
---------->
DOF2
-
DOF2
<------
ZmHOX2a(1)
<----------
DOF2
<----------
DOF2
--------->
AHL20(2)
tgtggatgaggaatattagctcaagatttcaaaacttttacgtgctcttttcttctttcaattcttttttttataaaaaaataaaaggtctcagaaaggt
198200
<----------
DOF2
------>
MYB46(1)
------>
MYB83
<---------
ALFIN1
<---------
MYB55(2)
--------->
MYB46(3)
--------->
ANAC58
------>
MYB46(1)
------>
MYB83
--------->
ANAC58
--------->
DEAR3(1)
--------->
AtMYB61
<---------
ALFIN1
--------->
MYB46(3)
--------->
YAB1
--------->
YAB1
-------->
P
<-----------
GT1
<---------
YAB1
<------
ZmHOX2a(2)
<---------
ICU4
--------->
DAG2
<---------
ARR14(2)
--------->
YAB1
<------
ZmHOX2a(1)
<---------
YAB1
<----------
DOF2
<---------
ICU4
====================================
HOX2a_HOX2a
<XXXXXXXXXXXXXXXXXXXX
MIR823
>
DOF2
--------->
MYB59
--------->
ARR14(2)
<-----------------
AGL1
<---------
AHL20(2)
-----
ttagaggataaggtcccttatcatgaaaacaaggatcagcctctttcacttaccctctcaggctctcatcttaaataatcaccacccactttagatgtta
198300
<-------
TEIL
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
AGP1
<-------
TEIL
--------->
ARR14(2)
<---------
HSFB2a(2)
<---------
ARR11(3)
<---------
YAB1
--------->
GLK1(2)
====
--------->
ARR11(3)
<---------
WOX13(1)
--------->
HSFB2a(2)
---->
MYB59
---------->
DOF2
--------->
HSFB2a(2)
--------->
ANAC46
<---
ggccatttgtttgtggtatacatatagaaagatccatacttctctaggctctctctagaccagagattgctattgtatacacaatctagaagatgcaaag
198400
------->
GAMYB
--------->
MYB52(1)
--------->
ANAC58
--------->
AHL20(2)
--------->
ANAC46
<------
ZmHOX2a(1)
<------
ZmHOX2a(2)
--------->
ANAC46
----------->
GT1
===============
HOX2a_HOX2a
--------->
ANAC58
----------->
GT1
<---
---
ZmHOX2a(1)
<---------
ZAT14
----------->
RAV1(1)
<---------
AtLEC2
--------->
AHL20(2)
----
gattaacatcgatcatggactgttctactctacgaaacaacagactcagtgaaaactcttagcatgaaaatgaagaggaaataaaaaaaatagagaagaa
198500
Previous
Next
AGI:
At3g01500.1
Description:
CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding. Identical to Carbonic anhydrase, chloroplast precursor (CA1) [Arabidopsis Thaliana] (GB:P27140;GB:Q0WWA9;GB:Q8RWW2;GB:Q93VR8); similar to CA2 (BETA CARBONIC ANHYDRASE 2), carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G14740.2); similar to CA2 (BETA CARBONIC ANHYDRASE 2), carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G14740.1); similar to chloroplast carbonic anhydrase precursor [Thlaspi caerulescens] (GB:AAS65454.1); contains InterPro domain Carbonic anhydrase, prokaryotic-like, conserved site; (InterPro:IPR015892); contai
Range:
from: 194731
to: 197981
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version