Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->GLK1(2)                                                                               <XXXXXXXXXXXXXXXXXXXXMIR832-5P                                                                               <---------GLK1(2)                                                                     ------>ZmHOX2a(2)                                                          ------->PIF5       <---------YAB1                                                          ------->MYC3      <---------TOE2(3)                                                          <-------MYC3     --------->MYB52(1)            <---------ARR14(2)                            <-------MYC2     <-----------GT1          < ------->ZAT18                             --------->ZAT2 ------->MYC2     --------->YAB1        ---- -------ANAC58                             --------->At4g35610      <------ZmHOX2a(2)            <--- -------ANAC46                 --------->REM1(2)          <-------PIF5    --------->ICU4   --------->LBD16 ------>ANAC55(2) <---------At4g35610      <---------At4g35610     --------->ARR11(3)     <---------HSFC1(1) -------ANAC58    --------->At4g35610    <-----------RAV1(2)       <---------ARR11(3)     --------->HSFB2a(2) ----TEIL   --------->ARR14(2)--------->ALFIN1        --------->ZAT18----------->GT1      <---------HSFB2a(2)   gcgtgctagagtcggatttgagctcaaaaaccgtggagaagacgcagatggcaatgggcacgagcatgagatcgtaataacgattctcgattccagaaac  138300                                          ---------->DOF2                                   <---------ATHB12                               ------>ZmHOX2a(1)                              --------->TOE2(3)                                     ---------->DOF2         <---------AtLEC2 --------->GLK1(1)             --------->DAG2           ----------->RAV1(1)    <----------DOF2       <---------GLK1(1)            ---------->DOF2          <----------ID1 ----------DOF2          --------->ARR11(3)      --------->ANAC58              --------->ZAT18 ----->ARR11(3)          <---------ARR11(3)      --------->ANAC58       --------->ANAC58 ------ARR11(3)       --------->YAB1---------->DOF2   <---------ATHB12  --------->ANAC58   atctttcttttgcaggtagaacattaagaactcctcaatgaagccaaagagaagcaataaagttgtaatcgaagacggaagtgcaacaaagacagcgttt  138400                                                                                               ======                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              <------                                                                          ----------->HVH21  <-------                                                                          --------->WRKY38(1)--------                                                                          --------->WRKY12  ---------            --------->CCA1(2)         <---------------AtSPL3           --------->ATHB12 =============           <---------ARR11(3)         <---------------AtSPL8          <---------YAB1    ------>ZmHOX2a(2)           <---------ARR14(2)      ==============================HOX2a_HOX2a          <---------ARR14(2)           --------->ARR14(2)      <------ZmHOX2a(1)       ------>ZmHOX2a(2)          --------->ARR14(2)     <---------WRKY18(1)           ===============================HOX2a_HOX2a  <---------ETT(1)<-----    --------->WRKY12     <---------ANAC58                 <------ZmHOX2a(2)    ----------->HVH21    ----------->HVH21    ----------->GT1                 --------->ARR14(2)   --------->DEAR3(2)=====    --------->WRKY38(1)  <---------ANAC46                <---------ARR14(2)   --------->MYB46(3)-----    --------->WRKY45     <---------ANAC58                <---------ARR11(3)<---------WRKY18(1)<------  <---------At4g35610    <---------ANAC55(2)    <---------At4g35610   <------ZmHOX2a(2)<------ZmHOX2a(2)  --------->At4g35610    --------->ANAC55(2)   <---------ALFIN1      <---------ARR11(3)==============   ttggagttgaccagatatgttagaatggcgtaatataggaatagtactgccactgccacgatctgtaactggatcattgacccgacccgatcgcgagatc  138500                                                                                          <------NtERF2                                                                                          --------->RAP2.3(1)                                                                                          --------->ATERF1(1)                                                                                         <---------ORA47(2)                                                                                         <---------RAP2.3(1)                                                                                         <---------ATERF1(1)                                                                                         <---------ERF1                                                                                         ------>NtERF2                                                                                        <---------ANAC46    --------->At4g35610                                                                 --------->ATERF1(2)    <---------At4g35610                                                                 <---------ATERF1(2) ====================HOX2a_HOX2a                                                        <---------DEAR3(1) --->CCA1(2)                                                                            <---------RAP2.6(2) --->ARR14(1)                                                                           <---------RAP2.3(3) -->ARR14(2)                                                                            <---------RRTF1(3) -->AGP1                                                                                <---------RRTF1(2) ---ARR11(3)                                              --------->LBD16               <---------DREB2C(2) --GLK1(1)                                               <---------ANAC46               <---------RAP2.3(2) ->GLK1(1)                  --------->ANAC58            <---------LBD16          --------->ARR14(2) -->ARR10                  --------->ZAT18             --------->CCA1(2)         <---------GLK1(2) ====================HOX2a_HOX2a                  ---------->DOF2                --------->ARR11(3) -ZmHOX2a(2)   ----------->GT1                 --------->ANAC58                  <---------ARR14(2) ====================HOX2a_HOX2a               --------->ANAC58             --------->MYB52(1) ->ZmHOX2a(2) <------ZmHOX2a(1)            --------->ANAC58                 ----------->RAV1(1) ---ARR14(2) ----------->GT1--------->ANAC58 ---------->DOF2              ------>ZmHOX2a(2)   ------- ====================HOX2a_HOX2a           --------->ANAC58         <---------At4g35610<---------LBD16   cgattgagctgaagaaggagaaaaacgagttcgcaataaacagagacgaaagcaaagctacggggatggaagatgatccaacagattttggcggcgaagc  138600                                                                                      --------->DEAR3(1)                                                                                  <-------MYC2                                                                                  ------->MYC2                                                                                  ------->MYC3                                                                                  <-------PIF5                                                                                  ------->PIF5                                                                                  <-------MYC3                                                                                 ====================                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                    --------->ZAT18  <------NtERF2                                                                    <---------ZAT14 ------>NtERF2                                                                    --------->ZAT14--------->ANAC46                                   <---------HSFB2a(2)     <-------TEIL          <---------TGA1a                                   --------->HSFB2a(2)<-----------RAV1(2)        --------->TGA1a   ------>ZmHOX2a(2)        <---------At4g35610      ------>ZmHOX2a(2)           --------->ANAC58  <---------At4g35610       --------->At4g35610     <------ZmHOX2a(2)            <---------ALFIN1  --------->At4g35610   ------->TEIL               --------->ARR14(2)          <---------ALFIN1   <-- ---->ARR10        --------->At4g35610             <---------ARR14(2)   ----------->HVH21         ---   tctgatctgagccataggggaagatgaatcagcagtaccagaagatgaattcggatccaggttcgatgagtccagtgactcccacgcgccgattactgca  138700                ----------->GT1               <------NtERF2              ------>NtERF2             --------->DEAR3(1)             <---------DEAR3(1)            --------->ATERF1(1)            <------NtERF2           <---------ATERF1(1)           ------>NtERF2          ----------->HVH21          --------->DEAR3(1)          <---------DEAR3(1)         --------->ATERF1(1)         --------->RAP2.3(1)         <------NtERF2        <---------RAP2.3(1)        <---------ATERF1(1)        ------>NtERF2        --------->LBD16       <---------ATERF1(2)       <---------DEAR3(1)       --------->DEAR3(1)       --------->ATERF1(2)       --------->RAP2.3(2)      --------->DEAR4(2)      --------->ATERF1(1)      --------->ERF1      --------->RAP2.3(1)      <---------LBD16     --------->ABI4(1)     <---------ATERF1(1)     ------>NtERF2    --------->DEAR3(1)    <---------ALFIN1    --------->DREB2C(2)                                                     <----------DOF2    ------->GAMYB                                                     <-----------GT1             <--   --------->DEAR3(2)                                                 <---------YAB1   >>>>>>>>>SARD1   --------->MYB46(3)                           ------------>CBF ----------->GT1       >>>>>>>>>CBP60g  <---------At5g28300                       --------->YAB1     <-----------RAV1(2) <------ZmHOX2a(1)- ===========MYC_MYB                         <---------ICU4   --------->GLK1(2)  <---------HSFB2a(2) - -------ARR14(2)<---------ANAC58           <---------ATHB12  --------->ARR14(2) <---------LBD16 <---- ------>ARR14(2)<---------ANAC58       ------------>CBF      <---------ARR14(2) --------->HSFB2a(2)--   aatccaccgccggcgacggcgtaacttaatatacccatgactccaatcttcacaatctctgcgaatcaggttatacttctttcgaggaaatttggatttt  138800                                                         ----------->HVH21                                                         <---------ETT(1)                                                        --------->MYB46(3)                                                    <---------ETT(1)                                                    ----------->HVH21                                                  --------->CCA1(2)                                                  --------->ARR14(1)                                                 --------->ARR11(3)                                                 --------->ARR14(2)   <---------------AGL15                                                 <---------ARR14(2)   --------------->AGL15                                                 --------->ARR11(1)   ----------------->AGL2                                                 <---------ARR11(3)   ----------------->AG                                               --------->HSFB2a(1)    ----------------->AGL1          --------->TOE1(3)                    <---------HSFB2a(1)   <-----------------AGL2      ---------->DOF2                          ----------->ARR10     <-----------------AGL1 -------LBD16                    ------>ZmHOX2a(2)<------ZmHOX2a(2)  <-----------------AG -------->LBD16           --------->GLK1(2)  ---------->DOF2     <---------KAN4(2) ----->NtERF2      --------->GLK1(2)       --------->LBD16     --------->LBD16  --------->ARR14(2) -------GT1  --------->MYB52(1) <---------At4g35610------>ZmHOX2a(2) ----------------->AGL2      <--- ------->ANAC46   <---------GLK1(2)      <---------LBD16--------->DEAR3(2)      <---------ARR14(2)   tccgccattaaagcttaacagaatcgagcttctgatctgataaaccggaaagatccgacccgacccgaataacccaaaatgggataggctagtagcccaa  138900                                                                     <---------ANAC55(2)                                                                     --------->ANAC55(2)                                                                   <---------ICU4                                                                --------->WOX13(1)                                                              ------------>CBF                                                            ----------->HVH21                                                           <-------MYC3                                                           ------->MYC3                                                          --------->TGA1a                                                          --------->O2                       --------                                                          <---------O2                       <-------                                                          <---------ANAC55(2)                <-------                                                          --------->ANAC55(2)                --------                                                          --------->bZIP60(1)               <--------                                                          --------->ANAC46                --------->At4g35610                                                          <---------bZIP60(2)             <---------At4g35610                                                        ------------->DYT1                <---------ZAT2                                                      <-----------HVH21               <-----------RAV1(1)                                                     ------->GAMYB<---------ATHB12  --------->CCA1(2)                                                     --------->YAB1--------->YAB1   --------->GLK1(1)                                                     ===============MYC_MYB         <---------GLK1(1)                                                    --------->MYB46(3) ----------->HVH21 <-----------RAV1(1)                                        --------->AHL20(2)<---------TGA1a          <---------ARR14(2) ------ATHB12                           <---------AHL20(2)<---------bZIP60(1)      --------->ARR14(2)   taactcaatatgggcctactggggtcttcaaatagttcatgtttaaatattctaaccatcacgtgacaatcatgtgacctctatggatatgctgctgctg  139000                                                                    --------->YAB1                                                                --------->ATHB12                                                               <---------ATHB12                           <---------ANAC46                    --------->MYB46(3)                ----                           <---------ANAC58                   -------->P<---------ANAC58         <---                           <---------ANAC58                 <---------MYB111(2)                  <---                  *TSS     <---------AtLEC2                 --------->MYB46(3)              <------ZmHOX2a(2) ->ZAT2      <---------ANAC55(2)                      <-----------GT1   <---------ANAC58 --------->LBD16 --ZAT2      <---------ANAC58             <---------ANAC46 --------->At4g35610          <---------HSFB2a(2) --At4g35610 <---------ANAC58             <---------ANAC58--------->ANAC46              --------->HSFB2a(2) ->At4g35610 <---------ANAC46             <---------ANAC58--------->ANAC58          <----------DOF2<- ---RAV1(1)  --------->ANAC55(2)     <-----------RAV1(1)  --------->ANAC58         <---------DAG2----   catatagctccgcttgcgtaatccagtttgcttggagaaatgttgcttccactgtttcaccagcaaccattgatacttgccaaaacctttcccgatcgaa  139100           <---------ANAC46           <---------ANAC58           <---------ANAC58    ------>NtERF2    --------->LBD16   --------->ANAC58                                               <---------At4g35610   --------->ANAC58                   --------->ANAC58        --------->LBD16   --------->ANAC46               <---------HSFB2a(2)         ------>NtERF2              --------->ETT(2)  <---------LBD16                 --------->HSFB2a(2)       <---------LBD16              <---------ETT(2) ----->HSFC1(2)         --------->ANAC58                 <---------GLK1(1)            --------->LBD16 ------HSFC1(2)         --------->ANAC58    <-----------HVH21--------->ANAC46   <---------At4g35610 ------HSFB2a(1)       ------->GAMYB  --------->ANAC46   --------->GLK1(1)      --------->At4g35610 ----------GT1        <---------ALFIN1--------->ANAC58 --------->ZAT18      --------->ARR14(2) ----->HSFB2a(1)   --------->ANAC46--------->ANAC46    <---------ZAT18      <---------ARR14(2)   ttttcccgccattccttgttcccaacaccctagtttcgcgacgcaatgtcagtcgagcgaactccggcatcttctgtagttctgcttccggtcgaaagac  139200  Previous    Next  AGI:  At3g01360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55230.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73131.1); contains InterPro domain Protein of unknown function DUF716 (InterPro:IPR006904) Range:  from: 136406    to: 138738    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01370.1    Description:  ATCFM2/CFM2 (CRM FAMILY MEMBER 2). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G23070.1); similar to hypothetical protein OsI_015679 [Oryza sativa (indica cultivar-group)] (GB:EAY94446.1); similar to OSIGBa0130P02.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67138.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14836.1); contains InterPro domain CRS1/YhbY (InterPro:IPR001890) Range:  from: 139018    to: 143713    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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