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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                   -
                                                                                                  <-
                                                                                                 <--
                                                                                                 <--
                                                                                                 ---
                                                                                                 ---
                                                                                                 ---
                                                                                                 <--
                                  --------->ARR14(2)                                          <-----
                                  <---------ARR14(2)          <---------ANAC58                ------
      --------->ARR14(2)        <---------ATERF1(1)           <---------ANAC58               <------
   <------NtERF2             --------->ALFIN1              ------->PIF5                      -------
------ANAC46              <------ZmHOX2a(1)                <-------PIF5                      -------
------ANAC58        <---------ANAC58               <-------TEIL    ----------->RAV1(1)      <-------
------ANAC58        <---------ANAC58  ------>ZmHOX2a(1)  ------>ZmHOX2a(1)             <<<<<<<<<TBF1
 
cttggccgagaaacgcttggactgcttgaggagtgaggctcctcgtgattcacattcgtcctcgtgcttacaacagatggagagggtttcttcttcccgg  19673800
             <-----------HVH21
 ------>ZmHOX2a(1)
----->ZmHOX2a(2)                                                                                   <
-----ZmHOX2a(2)                                                                                    <
-------ARR14(3)                                                                                    <
-------ARR14(2)                                                                               ------
------>ARR14(3)                                                                              <------
------>ARR11(3)                                         <---------YAB1                      <-------
------>ARR14(2)                                         --------->ICU4                 <---------ZAT2
-------ARR11(3)        ----------->GT1           <---------HSFB2a(2)                   <---------At4g35610
----TOE1(2) <-----------RAV1(1)                  --------->HSFB2a(2)<---------MYB52(1) --------->ZAT2
--->LBD16   <---------bZIP60(2)                <------NtERF2 ---------->DOF2           --------->At4g35610
---LBD16    <---------bZIP60(1)           <---------DEAR3(1) =======================================
-->LBD16    --------->bZIP60(1)     <---------ANAC46 --------->ICU4=================================
-->ANAC46   <---------REM1(1) --------->YAB1<------NtERF2  <---------YAB1    <-----------RAV1(1)   <
--LBD16   --------->ZAT14   --------->GLK1(2)<---------DEAR3(1)    <----------DOF2 <---------REM1(1)
 
gatcctccatcagtgatgtcgctggagggagaatcatcgtcgtggtcgtcgtcgagatgatgatgaaagcctttagccaaatgttgttgtagctggaggg  19673900
                                                         <------NtERF2
                                                         ------>NtERF2
                                                        --------->LBD16
                                                        ------>NtERF2
                                                       <---------DEAR3(1)
                                          ------>ZmHOX2a(2)
                                         <------ZmHOX2a(2)
                                        --------->ARR14(2)
                                 ================HOX2a_HOX2a                                       -
      --------->CCA1(2)          <------ZmHOX2a(1)    <---------At4g35610                          -
---------ANAC58                  ===============HOX2a_HOX2a                                      ---
---------ANAC58                 ----------->HVH21     --------->ATERF1(1)                        ---
---------ANAC46             --------->HSFB2a(2)       --------->At4g35610                        ---
----->GT1                   <---------HSFB2a(2)       <---------LBD16                           <---
---MYB46(3)               <---------At4g35610        <---------ATERF1(1)                        <---
--ANAC46     <---------------AtSPL3     <---------ARR14(2)<---------DEAR3(1)                   -----
=========bZIP_DOF         --------->At4g35610      ----------->RAV1(2)    ----------->HVH21    <----
=========bZIP_DOF         ----------->RAV1(2)<---------At4g35610      ------>NtERF2          -------
---------TGA1a           ------->TEIL  --------->GLK1(1)<---------RAP2.3(1)                <--------
 
tgacttgagagatggaatggtacttctgcatctggaggacagggatccagttgagcctgcggcgatgaagggctgccatgacagactcgtattgagcgga  19674000
                                                      <------NtERF2
                                                      --------->At4g35610
                                                      <---------At4g35610
                                                      --------->LBD16
                                                     --------->RAP2.3(2)
                                                     --------->ANAC58
                                                     --------->ANAC58
                                                     --------->RAP2.6(2)
                                                    --------->RAP2.3(1)
                                                   --------->ATERF1(1)                             <
                                                   <---------DREB2C(1)                           <--
                                                   <------NtERF2                                ----
                                                   --------->DREB2C(1)                          <---
                                                   <---------ATERF1(1)                          ----
                                                   ------>NtERF2                                <---
                                                  ------>NtERF2                                 ----
                                                  <---------ERF1                               <----
                                                  <---------ATERF1(1)                          <----
                                                  <---------SPL7                               <----
                                                  <---------RAP2.3(1)                          -----
       <---------ANAC58                          <---------RAP2.3(2)                           <----
       <---------ANAC58                          <---------DREB2C(2)                           <----
   --------->ATERF1(1)                           <---------RRTF1(2)                            <----
   <------NtERF2                                 <---------ATERF1(2)                          <-----
  <---------ATERF1(1)                            <---------RAP2.6(2)                          ------
  --------->LBD16                                --------->ATERF1(2)                          <-----
  <---------SPL7                                 <---------ANAC58                             <-----
 --------->DEAR3(1)                              <---------RAP2.3(3)                          <-----
<---------LBD16                                  <---------DEAR3(1)                           <-----
-------->LBD16                                   <---------ANAC58                             <-----
----->NtERF2                                    --------->ATERF1(1)                           <-----
--->ZmHOX2a(2)                                  --------->RAP2.6(3)                           <-----
------>MYB46(3)                                 <------NtERF2     --------->ANAC58            <-----
------>ATERF1(1)                               <---------ATERF1(1)--------->ANAC58        ------>ZmHOX2a(1)
------ATERF1(1)        --------->ZAT18        <---------DEAR3(1)  --------->ANAC46     <------NtERF2
---ZmHOX2a(2)          --------->ZAT14       --------->ATERF1(1) --------->LBD16     <---------RAP2.6(2)
---->ARR14(2)          <---------ZAT14      <-------GAMYB        ------>NtERF2       <---------ANAC58
-----ARR14(2)        <---------At4g35610   <---------ANAC58      <------NtERF2       <---------ANAC46
---->ARR10           --------->At4g35610   <---------ANAC58     --------->DEAR3(1)   <---------ANAC58
-At4g35610     --------->DAG2              <---------ANAC46  --------->ANAC46   <---------AtLEC2<---
 
tccgccggaggcctgcataaggtgagcgcagagagcatcgatgatggcgttggcggccgcaaactcgccgcgaaaccaagtgagcatggcgtccttggcg  19674100
    <----------ID1
--------->ARR14(2)
<---------ARR14(2)
------NtERF2
-------ANAC46
----->At4g35610
------LBD16
----->RAP2.3(1)
------At4g35610
----->ATERF1(1)
-----ATERF1(1)
-----ORA47(2)
-----RAP2.6(1)
->NtERF2
-----RRTF1(1)
-----RAP2.3(1)                                <---------ANAC58
-----ERF1                                     <---------ANAC58
----RAP2.3(3)                                <------NtERF2
--->ATERF1(2)                               ------>NtERF2
----RAP2.6(2)                               --------->LBD16                    ------>ZmHOX2a(2)
----ATERF1(2)                              --------->DEAR3(1)                --------->ARR14(2)
----DEAR3(1)                               <---------DEAR3(1)                <---------ARR14(2)
----DREB2C(2)                              <---------ATERF1(2)     ---------->DOF2
----RRTF1(2)                               --------->ATERF1(2)  <---------TOE2(3)                 <-
----RRTF1(3)           <---------MYB46(3) --------->ATERF1(1)   <---------TOE1(3)             <-----
----ANAC46         ------->GAMYB <------ZmHOX2a(1)             --------->MYB52(1)           <-------
----RAP2.3(2)   --------->MYB52(1)  <------ZmHOX2a(1)          <---------DOF5.7(2)      <---------ARR14(2)
---NtERF2---------->DOF2----------->GT1 --------->GLK1(2)    --------->DOF5.7(2)    <------ZmHOX2a(1)
 
gcggaatcggacaaaagaacaacgggagggtgaagaggaggagaagccggcgtttcagccatcagttaacgaaagaatgggatcggaggaggttttgggg  19674200
                                                                                       ----------->GT1
                                                                                       --------->ANAC46
                                                                                       --------->ANAC58
                                           <---------AHL20(2)                          --------->ANAC58
                                          <---------YAB1                         --------->YAB1
                                       <---------YAB1                            -------->HAHB4
                                       --------->ICU4                           <---------------AGL15
                           --------------->AGL15                              --------->YAB1
      <---------ANAC58     =====================================================================MADS_MADS
      <---------ANAC58     <---------------AGL15                             <---------AHL20(2)
---------DOF2    <-----------RAV1(1) --------->YAB1                         --------->AHL20(2)
----ANAC46     <----------DOF2    ----------->GT1   <----------DOF2  ----------->RAV1(1)    --------
--LBD16<----------DOF2   ----------->GT1--------->YAB1      <---------AtMYB61--------->AHL20(2) ----
 
ggtttaagggcttgaatgctttgttggatactaaaatttgtaataataaatgtttctttggttttggtttagccacaaaattaataatacaagtaaaaag  19674300
                                 --------->ALFIN1
                                 <---------ANAC46                                     --------->YAB1
                                --------->ALFIN1                                      --------->TOE2(3)
                                --------->ATERF1(1)                        <------------CBF
                               --------->ALFIN1                           <---------AHL20(2)
                              --------->ALFIN1                            -------->ATHB1
                            <------MYB46(1)                               <---------ICU4
                            <------MYB83<----------ID1                    -------->HAHB4
                           --------->MYB111(2)                            --------->ATHB12
                --------->AHL20(2) --------->ALFIN1                       --------->ATHB51
            ----------->GT1--------->MYB111(1)                           --------->ICU4
   <---------AtLEC2       --------->ALFIN1                               <---------YAB1          <--
-->DOF2     <---------YAB1<--------P  --------->ALFIN1                   <---------ATHB51        ---
----->ARR11(3)  <---------AHL20(2)--------->ALFIN1                  --------->YAB1    --------->TOE1(3)
 
ctctaggcatggatgatgtttaaatataggtaggggggggggagggacaaactcaactcgactcgactccatcgtaattattgactaaaccataacttaa  19674400
   --------->AHL20(2)
   <---------AHL20(2)
  --------->AHL20(1)
  --------->AHL20(2)                                                                              <-
  <---------AHL20(1)                                                                             ---
  <---------AHL20(2)      <------ZmHOX2a(1)        <-------GAMYB             <<<<<<<<<TBF1     <----
-------AHL20(2)   ---------->DOF2                 <-----------RAV1(1)   <----------DOF2      <------
------>AHL20(2)  <------ZmHOX2a(1)    ------>ZmHOX2a(1)      <---------CCA1(2)     <---------ALFIN1
 
aaaaataaaattaagttggaggaaagtgaggagaacaagtccttcgatcgagtctgttgtggccatatcatttagctttcttcttcccacattgcccctc  19674500
                         <----------ID1
                       ---------->DOF2
                     <------NtERF2
                    --------->LBD16
                   --------->LBD16
                   --------->ETT(1)       <----------DOF2
                  <---------LBD16     <----------DOF2                <---------CCA1(2)
-----ZmHOX2a(1)<----------DOF2    --------->RVE1(1)               <---------TOE1(2)
------>LBD16  <---------ANAC58   --------->GLK1(2)             <---------ANAC58
-------RAV1(2)<---------ANAC58   --------->ARR11(3)            <---------ANAC58    --------->MYB46(3)
---ALFIN1------>ZmHOX2a(1)       <---------ARR11(3)        <---------MYB52(1)  --------->MYB46(3)
 
aggagaagagtcctctcgcttgccggaaaagacaaaaatctctttcttttctctactaggccgttttcgttcgtatcatccatccatccatccatggtta  19674600
                                          <---------ANAC58
                                      <---------ANAC58
                               --------->ARR14(2)
                            --------->YAB1<---------ANAC58
                            --------->TOE1(3)
                            <---------------AGL15
                            --------->TOE2(3)                  --------->ATHB51
                           ----------------->AGL2             <---------YAB1
                           ----------------->AG            <---------YAB1
                           <-----------------AGL1         <----------DOF2
         <---------ANAC46  ----------------->AGL1      <---------ARR11(3)               <---------YAB1
    <---------AtLEC2      -------->P  <---------ANAC58 --------->ARR11(3)           --------->YAB1
   <-------TEIL  --------->ICU4<---------ARR14(2)     <---------CCA1(2)  ------>ZmHOX2a(1)
 
cagagatgcatggtttggaactaattatctaccataactggccttgcctctctctatatatctttattattgtctcctaatctgctataatatgactgcc  19674700
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AGI:  At2g48080.1   
Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G02940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22468.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123)
Range:  from: 19672060    to: 19674162    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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