Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->HSFB2a(2)      ------>MYB46(1)      ------>MYB83   ----------->RAV1(2)   --------->ZAT2                               >>>>>>>>>>>>>>>>>LFY  ------>MYB46(1)                   ----------->RAV1(1)  -------->P                      --------->ZAT18  ------>MYB83          ----------->RAV1(1)     <<<<<<<<<<<<<<<<<LFY             --------->ARR14(2) -------->AtMYB61      <----------ID1          --------->ANAC58                  <---------ARR14(2) --------MYB52(2)    --------->ANAC58          --------->ANAC58           <------ZmHOX2a(2) ------->MYB46(3)    --------->ANAC58 --------->AtMYB61                 ------->GAMYB      <---------YAB1 ->DOF2 <---------HSFB2a(2)  ---------->DOF2   --------->ANAC46  ---------->ID1 <---------CCA1(2)   aaccaacctgccagaagaagcgaaggcaacaagaagcccaccaaaaaactcgccattggaaacttttgtcttaacgatcaccatatcccaattctcatcg  19669500                        ------>NtERF2                       --------->DEAR3(1)                       <---------ETT(1)                       ----------->HVH21                         --------->LBD16                   --------->ZAT2                 --------->ANAC58                   <---------ZAT2                 --------->ANAC58            <---------ALFIN1                    --------->MYB52(1)<------NtERF2          XXXXXXXXXXXXXXXXXXXXX>MIR853     --------->DAG2      <---------LBD16         ------>ZmHOX2a(2)                ---------->DOF2     <------NtERF2        <------ZmHOX2a(2)                ---------->DOF2      <---------ATERF1(1)       --------->ARR14(2)              <---------HSFB2a(2)    ------>NtERF2      ----------->GT1       <---------ARR11(3)              --------->HSFB2a(2)   --------->ANAC46    <------ZmHOX2a(1)       --------->ARR11(3)        <---------ARR11(3)------->GAMYB--------->DEAR3(1)     <---------ICU4       <---------ARR14(2)  --------->TOE2(3)   <---------WRKY12<------NtERF2    ----------->GT1   aattcaatagatcccctctctagctccgacctcaatttcttccaaaaggccaacgaaatcagcccgccggagactaaaacggaggataaaaatttccaat  19669600                                <---------MYB46(3)                              <---------ZAT2                              --------->At4g35610                         --------->DAG2                        --------->DAG2                       ---------->DOF2                     --------->LBD16                    --------->ANAC46                    --------->LBD16                   --------->HSFB2a(2)                   <---------HSFB2a(2)                   <---------------AGL15                   --------------->AGL15                  ----------------->AGL1   <---------ANAC58           <---------STY1(2)  <---------At4g35610                                                  <-           --------->STY1(2)<--------P     --------->ALFIN1          <---------ARR14(2)            --  --------->ANAC58<-----------------AG     <---------ANAC58   <---------ANAC58              ---------  --------->ANAC58<-----------------AGL1   <---------ANAC46   <---------ANAC58         *TSS <--------   tctcacgaattctagcaagttcccgaaaaggtagctgttgaagatgtgtgtgaatttgaaggtggattgcaaatttgagagaattggaaactggaaatcc  19669700                                         <---------ATHB12                                     ------------>CBF                                    --------->ANAC58                                    --------->ANAC58           <---------YAB1                                    --------->ANAC46          <---------AHL20(2)                           <----------DOF2           <---------YAB1       --------->LBD16                          ------>ZmHOX2a(2)         <---------AHL20(2)    ------>NtERF2                         <---------RVE1(1)          --------->AHL20(2)   --------->DEAR3(1)                         <------ZmHOX2a(2)      <---------ICU4--------->AHL20(1)                   <-                        <---------ARR14(2)     <---------YAB1 <---------AHL20(1)                 <---                        --------->ARR14(2)   <---------ICU4  <---------AHL20(2)                  ----      --------->ANAC58  <---------ARR14(3)   --------->YAB1  --------->AHL20(2)                  ----      --------->ANAC46  --------->ARR14(3)  --------->ICU4   --------->YAB1                  --------      --------->ANAC58  --------->ARR11(3)--------->YAB1 <---------AHL20(2)                 <-------- --------ARR14(2)       <-----------ARR10--------->ICU4  <---------AHL20(1)                ------>MYB46(1) ------->ARR14(2)       <---------ARR11(3)<---------ICU4 --------->AHL20(1)                ------>MYB83 >GLK1(1)           ---------->DOF2--------->HSFB2a(2)   --------->AHL20(2)      ----------->GT1 ==== -GLK1(1)       ---------->DOF2    <---------HSFB2a(2)--------->YAB1    <------NtERF2     --------->WOX13(1)   aaatccacaagcaaaaatcaaagaaagatcttttcttctcgcaataatcatcattttaataaattatatttagcgccgagaaatggctaaaccaatcaaa  19669800                             <---------ANAC58                          <---------WOX13(1)                         <---------ANAC58                         <------------CBF      <---------PCF2 <------------CBF     <---------DEAR3(2)  <---------ANAC58    <---------ZAT18 --------->ATHB12    <---------DEAR3(1)  --------->ATHB12 ============================================bZIP_DOF <---------O2       <--------ATHB1 <---------ANAC46   -------->ATHB1 <---------TGA1a    --------->ATHB51 --------->TGA1a    <---------ICU4                         <-------GAMYB --------->O2      <---------ATHB51  <---------AHL20(2)   <------MYB46(1) ----------HVH21   <---------YAB1<---------ANAC58         <------MYB83 ---------AtMYB77  --------->ICU4<---------ANAC46     --------->GLK1(1) ----->DEAR3(2) ------------>ATHB5<----------DOF2     <---------GLK1(1) ----->MYB46(3)------------>CBF  <---------ANAC58  --------->LBD16               <---------ATHB12 ->YAB1        <-------TEIL  <---------ANAC58    <---------LBD16             ------------>CBF -ATHB12      --------->GLK1(2)------>NtERF2    --------->MYB52(1)<------------CBF---------->DOF2 ==========MYC_MYB <---------ATHB12  --------->AHL20(2)  --------->MYB59  ----------->GT1          <<   ccgtcgtgggctcgagattcaattattgattgctggcttttaatttggaataccggagttcggttgagaattggaccggttcaataaagccaacaagttt  19669900                                                   --------->ANAC58                                                 <---------ALFIN1               --------->ATHB12                 <---------At4g35610              <---------YAB1                    --------->ZAT2              --------->ICU4                 <---------At4g35610              *TSS                           <---------ZAT14--------->ATERF1(1)     ------>ZmHOX2a(1)                       --------->At4g35610 ------>ZmHOX2a(1)    --------->TOE2(3)               <------MYB46(1)--------->ANAC58                      <----------DOF2    <---------ANAC58                <------MYB83--------->At4g35610                     <---------ANAC58    <---------ANAC58   <------ZmHOX2a(1)     --------->ZAT14<---------GLK1(1)           <---------ANAC58 <<<<<<<TBF1  <---------ATHB51     <---------AtMYB61        --------->GLK1(1)      <---------ICU4   cttcttccttatcgcgattattggaggagagaatgagttggtctctctgcagcacccatggggtctcctcttccatagctctcacttatggctttcgcca  19670000                                                                   <---------HSFB2a(1)                                                                   --------->HSFB2a(1)                                                                  --------->ARR14(2)                                                                 <---------GLK1(2)                                                                 <---------ARR14(2)                   <---------ARR14(2)                            --------->ARR14(2)                   --------->ARR14(2)                           <------NtERF2                   <-----------ARR10                           --------->LBD16                 --------->LBD16                              --------->RAP2.3(2)                --------->ANAC55(2)                           --------->RAP2.6(2)                <---------ANAC58                              --------->LBD16                <---------ANAC58                             <------NtERF2                <---------ANAC55(1)                          <---------LBD16                <---------ANAC55(2)                         ------>NtERF2                <---------ANAC46                            --------->LBD16              ------>MYB46(1)                              --------->ANAC46              ------>MYB83                                 --------->DEAR3(1)            <---------DAG2                                --------->DEAR3(2)            --------->AtMYB61                             <---------MYB55(2)         <---------ALFIN1           <---------ANAC46      --------->MYB46(3)       --------->CCA1(2)         ----------->HVH21      --------->ARR14(2)       <------ZmHOX2a(2)     --------->O2               <---------ARR14(2)      --------->ARR14(2)    ------>NtERF2           <------ZmHOX2a(1)   ------>ZmHOX2a(1)      --------->ARR11(3)   xxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->MYB52(1)             --------->At4g35610      <---------ARR11(3)   --------->DEAR3(1)   XXXXXXXXXXXXXXXXXXXX>MIR169B/C             <---------At4g35610      <---------ARR14(2)   <---------ALFIN1     XXXXXXXXXXXXXXXXXXXX>MIR169H-N             --------->ZAT14      --------->AGP1    --------->ANAC46       XXXXXXXXXXXXXXXXXXXX>MIR169A             ------>ZmHOX2a(1)    ----------->ARR10 <-----------GT1          XXXXXXXXXXXXXXXXXXXX>MIR169D-G     ------>ZmHOX2a(1) -   tagaagaagatccaccttccgtattttcgccacctctgacggattagaacccaaggacgacccgccggaatctcctctcccttcctcatcctctgctctc  19670100                      <----------DOF2                     <----------DOF2                     <---------DAG2                   ------>NtERF2                   <------NtERF2        <---------YAB1                 <-------TEIL   <<<<<<<<<<GT-1               <---------ARR14(2)      <---------TOE2(3)                             ------->TEIL            --------->DAG2      <---------ARR11(3)                           --------->YAB1       <--           ---------->DOF2<-----------GT1         <-------GAMYB       --------->AtLEC2          <---- --------->DOF2--------->ARR14(2)     <-----------GT1          <------ZmHOX2a(1)   --------->ZAT18<--   ggtaaagacttgaaaaaggtccgccttttttctatatcatttacgatttttctgttgaaaccataggaagacatgaaaatgaaaatgcaccatgttagat  19670200                                                                <-------GAMYB         <---------ANAC58                                      --------->MYB111(2)           <-------         <---------ANAC58                                      <---------MYB46(3)   --------->TOE2(3) ----MYB46(1)                                         ---------->DOF2       <---------At4g35610  <--- -----WOX13(1)                               <----------DOF2  <--------P    <---------ZAT2   -------- ----MYB83    ------->TEIL               <---------YAB1 --------->ANAC46    --------->At4g35610 <----   tggtctctagtgcttgaacctgttgaaagagttgctcaagcttatgacttttcaattcaagcaggttgttaacaagactgctgcaacctttgcccctaga  19670300         ----------->GT1      ------>NtERF2      ----------->RAV1(1)     ------->GAMYB     --------->DEAR3(1)     --------->ANAC46        --------->LBD16     --------->DREB2C(2)     --------->HSFB2a(2)                                              ------>ZmHOX2a(1)    --------->MYB46(3)      --------->LBD16                                                   <------  <---------ALFIN1          <---------LBD16                                           <---------DEAR3(1) --STY1(1)                 ----------->RAV1(2)                                    ------>ZmHOX2a(1) ------At4g35610     <---------ZAT2                        <-------TEIL------->TEIL--------->TOE1(1) ->STY1(1)           --------->ZAT2                    <---------TOE1(3)          <---------HSFB2a(2) -----ARR11(3)       --------->ZAT14    <----------DOF2<---------TOE2(3)          <---------LBD16   gcttccaccgccagtaaaaaccctgctctccctggaactactctttacaaagtttttgaggttcaaggctatgcatcgatgttcctcggaggtgtccttt  19670400  Previous    Next  AGI:  At2g48060.1    Description:  oxidoreductase. similar to unnamed protein product [Vitis vinifera] (GB:CAO68575.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22459.1); contains InterPro domain Cytochrome b/b6, C-terminal; (InterPro:IPR005798) Range:  from: 19665165    to: 19669687    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g48070.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO22460.1) Range:  from: 19669914    to: 19671112    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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