Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->HSFB2a(2)                                                 <---------HSFB2a(2)                                             <----------DOF2                                        ---------->ID1                                              -                                  --------->AHL20(2)                                                -   ----------->GT1                --------->AHL20(1)                                               <- ->ZmHOX2a(1)                     <---------AHL20(2)                          >>>>>>>>>MYB98   <----- -ALFIN1                         --------->AHL20(2)     ----------->GT1   <----------DOF2  ------>NtERF2 >DEAR3(1)                       <---------AHL20(2)    >>>>>>>>>TBF1--------->MYB52(1)    --------->ANAC46   ctgtgttgttaattgtttttgtttcttagtagaaaataatttggctcctttgtagaagaagaaaaaaactaaacggctttaacatatggactacgccgtt  19636100                                                                       --------->YAB1          <-----------GT1                                          ---------->DOF2 ------>TEIL            --------->ANAC46                      <------MYB83 -------->ARR11(3)     <---------TOE2(3)    --------->TOE2(3) <------MYB46(1) --------CCA1(2)      <-----------GT1      ----------->GT1 <---------MYB52(1)          <-----------HVH21 ----MYB52(1) --------->ANAC46            <---------ARR11(3)  ----------->GT1         ----------->GT1   tgtatcttgttgttacaaaccattaaacgttactgtttgatcaatatgttaattcagaactgtttggtttaaagcataagtattgaagtcgtcaaatgaa  19636200                                                                                                    -                                                                                                   <-                                                                                                   <-                           <-------TEIL                     <----------DOF2                   -------               <----------DOF2                 <---------MYB52(1)                           ---------              <---------ANAC58   <---------AHL20(2)  <---------AHL20(2)                   <---------MYB52(2)              <---------ANAC58   --------->AHL20(2) --------->AHL20(2)                  <-----------GT1         <----------DOF2  --------->CCA1(2)  <---------ANAC46       --------->ANAC46<----------DOF2--   caacttgcaatcttttgctttgtatgagatacaaataaaatcgtggtccgtttataaaatagctttctccaaacaatttcaattcccttttaactaacac  19636300              <-----------HVH21------->GAMYB       <---------LBD16        <---------MYB55(2)   ----------->HVH21          --------->DEAR3(2)   --------->MYB46(3)         <---------MYB52(2) --------->MYB52(1)           --------->MYB46(3) ------>GAMYB--------->ANAC58------>MYB46(1) --------MYB55(2)           ----------->RAV1(1)                                   ----------->GT1 --------MYB52(2)           --------->MYB52(1) ----------->GT1                    <---------ANAC46 -->ZAT6     --------->ANAC58------>MYB83      <----------ID1               <---------LBD16    ------ >MYB52(1)------>NtERF2    --------->AtMYB61---------->DOF2            <---------YAB1    <----------- ------->MYB46(3) ---------->DOF2<---------------------WRI1         <-----------------AGL3-----------   aacaaacgacccggcccgtcaaaagaagaccaacagacgatgaaataaaaggaaaaactcaattttctaaactatttttgggggtcgtaaataagtgaaa  19636400             ------------------------>ANAC81      <------NtERF2    --------->DEAR3(1)   --------->DEAR3(2)  --------->At4g35610                                                                     <---------MYB52(2)  <---------At4g35610 ----------->GT1                                              ---------->DOF2  - ---->DOF2  ---------->DOF2     ----------->GT1           <----------DOF2     --------->AHL20(2)   <- ------------TaNAC69(2)    ---------->DOF2     ---------->ID1<-----------GT1 <---------AHL20(2)   <-- >GT1------>NtERF2  ----------->GT1  ---------->DOF2    ---------->ID1  <---------YAB1 <----------ID1   agcctgccgacgaaaaaagaagaagtgaaaaaagaagtgaaaagcccttgtcttatttgtcttttactatttttctgatttaaaataaagaaacaaacat  19636500                                               <---------AHL20(2)                                               --------->AHL20(2)                                            *TSS                                           ----------->GT1                    ------>NtERF2  --------->YAB1 -------->ZAT6  <---------ANAC46   <---------ICU4                     ---------->DOF2          <----- --------At5g28300 <---------DEAR3(1)<---------YAB1              <---------LBD16             -------- ---------GT1 --------->MYB52(1) --------->GLK1(2)       ---------->DOF2     ---------->DOF2---------   ttacagtatttgtttataacgggggctaagtagagaatcatgagaagattaaaatccctaaaagttttgggggaaagaagaaagaaggaagacgatgatg  19636600                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                            <--------                                                                                            ---------             <---------At4g35610                --------->At4g35610                      <------ZmHOX2a(2)      --------->GLK1(2)                         <---------ZAT2      <---------ZAT2    --------->LBD16      --------->ARR14(2)               <---------At4g35610          --------->ZAT2  <---------LBD16--     <---------GLK1(2)                 --------->At4g35610          --------->At4g35610 --------->ARR14(2) ----YAB1    --------->At4g35610    <---------At5g28300 <-----------GT1            ------>ZmHOX2a(2)< ->YAB1   --------->LBD16        <-----------HVH21   <---------CCA1(2)       --------->TOE2(3)<------ >ICU4<---------ARR14(2)  <---------ZAT14       <---------At4g35610 <---------At4g35610 <---------ARR14(2)   atgctcagaatccgaagcagagatggactggagagagtcacagcggagggagctcatatcactgtttcccagctcaaaaccttgatcgcggatcagcttc  19636700                                                                                           --------->ANAC58                                                                                          ------->TEIL                                                                                       --------->ANAC46                                                                                       --------->ANAC55(2)                                            <---------ALFIN1                           --------->ANAC58                                      ------>ZmHOX2a(2)                        --------->DEAR3(1)                                      ==============HOX2a_HOX2a                <---------MYB46(2)                               <---------ATHB12                                --------->DEAR4(1) ------>ZmHOX2a(2)            ------>MYB83==============================HOX2a_HOX2a  --------->MYB52(1) --------ARR14(2)             ------>MYB46(1)------>ZmHOX2a(1)                 --------->DREB2C(2) --------ARR11(3)           <---------MYB55(2)--------->ANAC46        --------->ANAC46 --------->ANAC58 ------->ARR14(2)           --------->AtMYB61===========================HOX2a_HOX2a ----------->HVH21 -------At4g35610           --------->MYB46(3)--------->ANAC58   ------>ZmHOX2a(2) --------->AtMYB61 ------>At4g35610       --------->MYB46(3)------>ZmHOX2a(1)    --------->ARR14(2)------>MYB83  <----- -At4g35610      --------->ARR11(3)  <---------GLK1(1)         <---------ARR14(2)------>MYB46(1) >At4g35610  --------->At4g35610     --------->GLK1(1)     --------->LBD16<-----------HVH21--------->ANAC58 ------->ARR11(3)<-----------ARR10  <---------ARR11(3)     <---------At4g35610 --------->MYB46(3)   - ------ZmHOX2a(2)<---------ARR11(3) --------->ARR11(3)     --------->At4g35610--------->DEAR3(2)    - -----HVH21  <---------At4g35610--------->YAB1--------->ANAC58 <-----------ARR10--------->ORA47(1)---   agatccctctccataagcagaccttatccaccaatcgtgatctcctcctcgccaaaactcccgctgatctactcgccttcaccgacctcacggacccaaa  19636800                                                                                                    =                                                                                                   <-                                                                                     <-----------HVH21                                                                                    --------->ANAC46<                                                                                 ------>ZmHOX2a(1) --                                                                                 ====================                                                                                 ====================                                                                            --------->At4g35610    <-                                                                        =============================                                                                        --------->LBD16            <-                                                                        =============================                                                                        ------>ZmHOX2a(1)     -------          ------>ZmHOX2a(1)                                   --------->ZAT18   <---------ALFIN1 ----    <---------ALFIN1                                     <---------ANAC58   --------->GLK1(1)======== <---------ALFIN1                                        <---------ANAC58   <---------GLK1(1)======== ----ALFIN1                                           <---------DEAR3(1)--------->HSFB2a(2)  ------>ZmHOX2a(1) ----->MYB46(1)                                   --------->SPL7       <---------LBD16<---------MYB52(1) ----->MYB83           ------>NtERF2            --------->DEAR3(1)    ----------->RAV1(2)  ---------- ------>AtMYB61      --------->TOE1(1)  <---------ALFIN1 <---------ANAC46   <---------At4g35610<-----   cctccccctctcctctctcaacctcggccatggctctatgctctacctcgcctacgatggcgagcgctccattcctggagctcctcccgttactcctgcc  19636900                                                   <-----------HVH21      --------->HSFB2a(2)                         --------->ANAC58      <---------HSFB2a(2)                         --------->bZIP60(2)     <---------LBD16                              --------->ANAC58    <---------LBD16                               --------->ANAC46   ------>ZmHOX2a(1)                            <---------ANAC58 ------>ZmHOX2a(2)                              <---------ANAC58 =================HOX2a_HOX2a                  <-------TEIL <---------HSFB2a(1)                         <---------GLK1(2) --------->HSFB2a(1)                        <---------ZAT2 <---------HSFC1(2)                         --------->At4g35610 --------->HSFC1(2)                         <---------At4g35610 =================HOX2a_HOX2a             <-----------RAV1(2) --------GLK1(2)                        ================================RAV ------ZmHOX2a(2)                       <------NtERF2              --------->O2 ------->ARR14(2)                       ------>NtERF2              --------->TGA1a =======HOX2a_HOX2a                     ----------->RAV1(1)        <---------TGA1a ======HOX2a_HOX2a                      <-----------HVH21     --------->At4g35610 --------ARR11(3)                      --------->ANAC46       <---------At4g35610 =======HOX2a_HOX2a                    --------->ANAC58     <-----------RAV1(2) --------ARR14(2)                      --------->ANAC58   <-----------HVH21 ======HOX2a_HOX2a                    --------->MYB46(3)  <-----------TGA1 -->MYB52(1)  --------->At4g35610     --------->DEAR3(1) --------->O2 ----->LBD16  <---------At4g35610  ------>ZmHOX2a(2)     ====================bZIP_bZIP ======HOX2a_HOX2a                 ===================================HOX2a_HOX2a               ----- =======HOX2a_HOX2a          <---------ANAC58--------->ARR14(2)    <---------O2           ------>ZmHOX2a(1) ->RAV1(2) ===============================HOX2a_HOX2a    --------->TGA1a      <---------ATERF1(1) ----LBD16 <------ZmHOX2a(1) <---------ANAC58<---------ARR14(2)<------ZmHOX2a(1)          ===========   ggatccttcgggaggaagatgaccgtcgatgacttgatcgcccgccagatgcgcgtcactcgtcaggagacgtctcactgcgactccgtctccttcgatc  19637000  Previous    Next  AGI:  At2g47960.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO16918.1); contains InterPro domain Protein of unknown function DUF974 (InterPro:IPR010378) Range:  from: 19632684    to: 19636253    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g47970.1    Description:  NPL4 family protein. Identical to NPL4-like protein 2 [Arabidopsis Thaliana] (GB:O82264;GB:Q3E6N3); similar to NPL41 (NPL4-LIKE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT3G63000.1); similar to unknown [Populus trichocarpa] (GB:ABK94012.1); contains InterPro domain NPL4 (InterPro:IPR007717) Range:  from: 19636544    to: 19638252    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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