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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
<-------
GAMYB
--------->
ANAC58
<---------------
AGL15
--------->
ANAC46
--------------->
AGL15
--------->
ANAC55(1)
<-----------------
AGL1
<---------
ANAC55(2)
------>
ZmHOX2a(2)
<------
MYB83
--------->
ANAC58
-------->
ANAC58
<---------
ANAC58
----------->
GT1
--------->
ANAC55(2)
-------->
ANAC58
<---------
ANAC58
<------
MYB46(1)
--------->
CCA1(2)
---
ANAC46
<---------
ARR11(3)
>>>>>>>>>
CBP60g
<---------
ARR14(2)
->
HVH21
--------->
ARR11(3)
----------->
TGA1
--------->
TOE2(2)
<---------
LBD16
-
HVH21
<---------
ATHB12
---------->
DOF2
>>>>>>>>>
SARD1
------->
TEIL
--------->
ARR14(2)
-
gtaagcatcccaatcgatcttcgtgt
ctgttaaaggcaaatgacgaaatttggtttaaaacctatgcaaatgcacatttcgagggatacgcaagcaaaaa
19575100
--------->
ICU4
----------->
GT1
<------
ZmHOX2a(1)
<------
--------->
DAG2
<---------
ICU4
--------->
ANAC58
--------->
ARR14(2)
--------->
DOF2
----------->
HVH21
--------->
YAB1
<---------
YAB1
--------->
ANAC58
<---------
ARR14(2)
aaaaaaggaggtaaatagctctcac
atggaacataggcgataataagtgcgactaggattgcatcagcaagaattagcgcgaatgcgaatggaactgcag
19575200
<------
NtERF2
<---------
ATERF1(1)
--------->
ANAC58
------>
NtERF2
--------->
RAP2.6(2)
<---------
DEAR3(1)
--------->
ANAC58
<------
NtERF2
--------->
ANAC46
--------->
ATERF1(1)
--------->
MYB46(3)
------>
NtERF2
--------->
DEAR3(1)
--------->
MYB52(1)
--------->
ATERF1(1)
<---------
ATERF1(1)
<------
NtERF2
----------->
HVH21
--------->
DREB2C(1)
------->
GAMYB
<---------
DREB2C(1)
--------->
DEAR3(2)
<---------
ATERF1(1)
--------->
MYB46(3)
<---------
ATERF1(1)
--------->
At4g35610
------>
NtERF2
<---------
At4g35610
<---------
RAP2.3(1)
---------->
ID1
--------->
DEAR3(1)
--------->
PCF2
<-------
TEIL
--------->
ZAT2
<---------
RAP2.6(2)
------>
ZmHOX2a(2)
<---------
ZAT2
--------->
DEAR3(1)
===================
HOX2a_HOX2a
--------->
ATERF1(1)
====================
HOX2a_HOX2a
--------->
RAP2.3(1)
<------
ZmHOX2a(2)
<---------
ALFIN1
<---------
ATERF1(1)
--------->
ARR14(2)
<-----------
RAV1(2)
----------->
HVH21
========================
HOX2a_HOX2a
--------->
At4g35610
<---------
bZIP60(2)
------>
ZmHOX2a(2)
------>
ZmHOX2a(1)
<---------
HSFB2a(2)
--------->
LBD16
------>
NtERF2
-----
RAV1(2)
<---------
ARR14(2)
--------->
LBD16
--------->
HSFB2a(2)
<---------
DEAR3(1)
--------->
AtLEC2
gttttttgaatagatcggatcgattcgtctccttccccagccgacggctacgagaagctctcaaactcgccggtgatgaggcgcccgccat
gaaaacaga
19575300
*
TSS
------->
GAMYB
--------->
MYB46(3)
--------->
MYB52(1)
----------->
HVH21
--------->
bZIP60(2)
--------->
ANAC58
--------->
ANAC46
<---------
ANAC55(2)
--------->
ANAC55(2)
--------->
ANAC58
------>
NtERF2
<------
NtERF2
--------->
LBD16
--------->
DEAR3(1)
<---------
ANAC46
<-----------------------
TaNAC69(2)
------->
GAMYB
--------->
DEAR3(1)
--------->
ANAC46
<------------
CBF
--------->
MYB52(1)
------->
TEIL
<---------
ATERF1(1)
<---------
AHL20(2)
<---------
WRKY38(1)
<---------
YAB1
<---------
AHL20(2)
--------->
MYB46(3)
<-----------
GT1
--------->
AHL20(2)
<------
gcaaatcgcatcagcgtctagccaacgccgcgtaa
cagacaactacttccatattactactcttctaattagcccaaattaaatgagcctattgggcttc
19575400
------------>
CBF
<---------
ZAT14
<---------
ICU4
--------->
REM1(2)
-------->
HAHB4
--------->
ZAT14
<---------
ATHB51
<---------
ATHB12
<------
MYB83
<------------
CBF
--------->
ICU4
--------->
ANAC58
<------
MYB46(1)
--------->
YAB1
--------->
ANAC58
<---------
DEAR3(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
DEAR3(1)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
DREB2C(2)
--------->
AHL20(2)
----------->
GT1
------------>
CBF
----
DOF2
<---------
REM1(1)
<---------
AHL20(2)
---------->
DOF2
--------->
AHL20(2)
<----
ttgtcttagtcggtgtagagcccaattgttgttttattttttaataatgcaaaagtattaagcgataaataaataagcatcgcaatcgtcccaaaactgt
19575500
<----------
DOF2
<---------
ZAT18
--------->
ZAT18
*
TSS
<---------
DAG2
------->
MYC2
<-------
PIF4
<-------
MYC3
------->
PIF4
------->
MYC3
<-------
PIF5
<-------
MYC4
------->
PIF5
------->
MYC4
<-------
MYC2
--------->
TGA1a
<---------
TGA1a
--------->
O2
--------->
ANAC55(2)
<---------
ANAC55(2)
======================
bZIP_DOF
--------->
O2
======================
bZIP_DOF
<---------
ANAC46
<---------
O2
<---------
O2
------------>
OsbHLH66
----------->
HVH21
<------------
OsbHLH66
--------->
AHL20(1)
--------->
At4g35610
--------->
ANAC58
<---------
AHL20(2)
<---------
At4g35610
--------->
ANAC58
---------->
DOF2
--------->
AHL20(2)
-----
ANAC46
<---------
ZAT6
<---------
ALFIN1
<---------
AHL20(1)
gtgtatgcatcagacatgagcatatagagtaag
cacgtgtccacactttttcacaaagttatctaaaaacaaaaaacaattaattagcattcgacgtgta
19575600
--------->
REM1(2)
<-------
PIF5
------->
MYC2
<-------
MYC2
<-------
MYC3
------->
MYC3
<-------
MYC4
------->
PIF5
------->
MYC4
<---------
TGA1a
==============================
bZIP_DOF
--------->
TGA1a
<---------
O2
<--------
ABF1
--------->
O2
==============================
bZIP_DOF
<---------
ANAC46
<-----------
GT1
<---------
ANAC55(2)
--------->
KAN4(2)
------>
NtERF2
<---------
YAB1
<---------
ALFIN1
<---------
ANAC58
------>
ZmHOX2a(1)
<---------
ZAT2
<-----------------
PIF3(1)
<---------
ANAC58
<---------
YAB1
<---------
At4g35610
--------->
ANAC46
<---------
DAG2
--------->
ICU4
--------->
ZAT2
--------->
ANAC58
<----------
DOF2
----------->
RAV1(2)
------>
MYB83
--------->
ANAC58
<----------
DOF2
<---------
ARR11(3)
------>
MYB46(1)
<-----------
GT1
---------->
ID1
<<<<<<<<<
TBF1
--------->
ARR11(3)
<----------
DOF2
catatcactcgccacgtgtacaagagccttggcctttttgcttcttcttcttgtctattaatatcatctcctgattatactctcttttgaccaagctgct
19575700
<
<-
--
---
<--
<---
----
<----
<-----
------
------
<-----
<------
------>
NtERF2
<-------
--------->
ARR14(2)
<---------
ARR14(2)
--------->
At4g35610
<-----------
ARR10
<------
ZmHOX2a(1)
<----
<---------
CCA1(2)
--------->
GLK1(2)
--------->
ARR14(2)
<--------
<---------
ARR11(3)
<---------
GLK1(2)
<---------
ARR14(2)
---------
--------->
MYB46(3)
--------->
TOE1(2)
<---------
GLK1(2)
<---------
At5g28300
tcttctccatctatccaacatctcaaatctcagtaatcttgttccttcgattctgttttggacgtttgta
atggattctcaggacatcagataccgcggc
19575800
----------->
RAV1(1)
--------->
ANAC58
----------->
HVH21
--------->
ANAC58
---------
ATERF1(1)
--------
ARR14(2)
------->
ARR14(2)
------>
ATERF1(1)
----
NtERF2
------
ATERF1(1)
----------->
RAV1(1)
----->
LBD16
<---------
bZIP60(1)
-----
DEAR3(1)
<---------
ETT(2)
----
LBD16
------>
NtERF2
--->
ATERF1(1)
--------->
DEAR3(1)
>
NtERF2
------>
NtERF2
--------->
WRKY12
-
NtERF2
<---------
DEAR3(1)
----------->
TGA1
<---------
DEAR3(1)
---
ATERF1(1)
--------->
RAP2.6(3)
----------->
HVH21
--------->
ATERF1(1)
--
DEAR3(1)
------->
GAMYB
----------->
HVH21
--------->
At4g35610
---------->
DOF2
<
-----
ANAC46
----------->
HVH21
--------->
DAG2
<------
ZmHOX2a(2)
-
-
LBD16
--------->
MYB46(3)
<------
ZmHOX2a(1)
--------->
ANAC46
<---------
DEAR3(1)
>
LBD16
--------->
At4g35610
<------
NtERF2
---------->
DOF2
---------->
DOF2
--------->
YAB1
<-
ggagacgacagagacgctgcaacgacggctatggccgagacagagaggaaaagcgctgacgacaacaaaggaaaacgcgatcaaaagagggcgatggcga
19575900
------>
ZmHOX2a(1)
----------->
RAV1(2)
------>
NtERF2
--------->
ARR14(2)
<---------
ARR14(2)
<---------
At4g35610
<---------
RAP2.3(1)
<---------
RRTF1(1)
<---------
RRTF1(2)
<---------
RAP2.3(3)
<---------
RAP2.3(2)
--------->
LBD16
<---------
RAP2.6(2)
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
--------->
ARR14(2)
<---------
ANAC46
--------->
ANAC58
<---------
LBD16
<------
NtERF2
<---------
ARR14(2)
<-------
GAMYB
--------->
ANAC46
<---------
LBD16
<---------
MYB46(3)
------>
ZmHOX2a(1)
--------->
CCA1(2)
<---------
ANAC46
<---------
LBD16
--------->
ARR11(1)
<---------
At4g35610
--------->
GLK1(1)
<---------
ANAC46
------------>
AtMYB77
<---------
ANAC55(2)
--------->
MYB52(1)
-------
MYC3
----------->
HVH21
--------->
ATERF1(1)
<---------
ANAC46
--------->
ANAC58
------>
MYC3
----------->
TGA1
<---------
ATERF1(1)
--------->
ANAC55(2)
----------->
HVH21
--------
O2
XXXXXXXXXXXXXXXXXXXXXXX>
MIR404
----------->
HVH21
------->
TEIL
--------->
ANAC46
aacgtggtctcaagtctctgacggtagcggttgcggctcctgtgctcgtgacgctcttcgctacgtatttcctcggcacaagcgacggatacgggaatcg
19576000
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AGI:
At2g47760.1
Description:
ALG3 family protein. similar to unknown [Populus trichocarpa] (GB:ABK95338.1); contains InterPro domain ALG3; (InterPro:IPR007873)
Range:
from: 19572605
to: 19575335
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At2g47770.1
Description:
benzodiazepine receptor-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO39983.1); contains InterPro domain TspO/MBR-related protein; (InterPro:IPR004307)
Range:
from: 19575534
to: 19576577
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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