AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                                                        --------->ANAC46
                                                                                        --------->ANAC58
                                                                                        --------->ANAC58
                        <-------GAMYB                                               --------->ANAC58
                       <---------------AGL15                                        --------->ANAC46
                       --------------->AGL15                                        --------->ANAC55(1)
                      <-----------------AGL1                                        <---------ANAC55(2)
              ------>ZmHOX2a(2)                <------MYB83                         --------->ANAC58
-------->ANAC58  <---------ANAC58              ----------->GT1                      --------->ANAC55(2)
-------->ANAC58  <---------ANAC58              <------MYB46(1)                    --------->CCA1(2)
---ANAC46   <---------ARR11(3)              >>>>>>>>>CBP60g                      <---------ARR14(2)
->HVH21     --------->ARR11(3)      ----------->TGA1     --------->TOE2(2)  <---------LBD16
-HVH21   <---------ATHB12  ---------->DOF2  >>>>>>>>>SARD1           ------->TEIL--------->ARR14(2)-
 
gtaagcatcccaatcgatcttcgtgtctgttaaaggcaaatgacgaaatttggtttaaaacctatgcaaatgcacatttcgagggatacgcaagcaaaaa  19575100
                                                                  --------->ICU4
     ----------->GT1                                <------ZmHOX2a(1)                        <------
--------->DAG2                          <---------ICU4           --------->ANAC58       --------->ARR14(2)
--------->DOF2   ----------->HVH21   --------->YAB1<---------YAB1--------->ANAC58       <---------ARR14(2)
 
aaaaaaggaggtaaatagctctcacatggaacataggcgataataagtgcgactaggattgcatcagcaagaattagcgcgaatgcgaatggaactgcag  19575200
                                                                                  <------NtERF2
                                         <---------ATERF1(1)                     --------->ANAC58
                                         ------>NtERF2                           --------->RAP2.6(2)
                                        <---------DEAR3(1)                       --------->ANAC58
                                       <------NtERF2                             --------->ANAC46
                                       --------->ATERF1(1)                      --------->MYB46(3)
                                      ------>NtERF2                             --------->DEAR3(1)
                                      --------->MYB52(1)                       --------->ATERF1(1)
                                      <---------ATERF1(1)                      <------NtERF2
                                     ----------->HVH21                         --------->DREB2C(1)
                                     ------->GAMYB                             <---------DREB2C(1)
                                    --------->DEAR3(2)                         <---------ATERF1(1)
                                    --------->MYB46(3)                        <---------ATERF1(1)
                                   --------->At4g35610                        ------>NtERF2
                                   <---------At4g35610                        <---------RAP2.3(1)
                       ---------->ID1--------->DEAR3(1)                       --------->PCF2
                    <-------TEIL   --------->ZAT2                            <---------RAP2.6(2)
                ------>ZmHOX2a(2)  <---------ZAT2                            --------->DEAR3(1)
                ===================HOX2a_HOX2a                              --------->ATERF1(1)
               ====================HOX2a_HOX2a                              --------->RAP2.3(1)
               <------ZmHOX2a(2) <---------ALFIN1                          <---------ATERF1(1)
              --------->ARR14(2) <-----------RAV1(2)                 ----------->HVH21
           ========================HOX2a_HOX2a      --------->At4g35610 <---------bZIP60(2)
           ------>ZmHOX2a(2)------>ZmHOX2a(1)  <---------HSFB2a(2) --------->LBD16------>NtERF2
-----RAV1(2)  <---------ARR14(2)--------->LBD16--------->HSFB2a(2)<---------DEAR3(1)  --------->AtLEC2
 
gttttttgaatagatcggatcgattcgtctccttccccagccgacggctacgagaagctctcaaactcgccggtgatgaggcgcccgccatgaaaacaga  19575300
                                  *TSS
                                ------->GAMYB
                               --------->MYB46(3)
                             --------->MYB52(1)
                            ----------->HVH21
                          --------->bZIP60(2)
                          --------->ANAC58
                          --------->ANAC46
                          <---------ANAC55(2)
                          --------->ANAC55(2)
                          --------->ANAC58
                         ------>NtERF2
                         <------NtERF2
                         --------->LBD16
                        --------->DEAR3(1)
                        <---------ANAC46
                       <-----------------------TaNAC69(2)
                      ------->GAMYB
                     --------->DEAR3(1)
                     --------->ANAC46                                                 <------------CBF
                   --------->MYB52(1)                                             ------->TEIL
                   <---------ATERF1(1)                                      <---------AHL20(2)
                  <---------WRKY38(1)                        <---------YAB1<---------AHL20(2)
                 --------->MYB46(3)               <-----------GT1          --------->AHL20(2)<------
 
gcaaatcgcatcagcgtctagccaacgccgcgtaacagacaactacttccatattactactcttctaattagcccaaattaaatgagcctattgggcttc  19575400
                 ------------>CBF
          <---------ZAT14                <---------ICU4
          --------->REM1(2)              -------->HAHB4
          --------->ZAT14               <---------ATHB51                         <---------ATHB12
       <------MYB83 <------------CBF    --------->ICU4                 --------->ANAC58
       <------MYB46(1)                --------->YAB1                   --------->ANAC58
       <---------DEAR3(2)            <---------AHL20(2)           --------->AHL20(2)
      <---------DEAR3(1)            <---------AHL20(2)           <---------AHL20(2)
      <---------DREB2C(2)           --------->AHL20(2)     ----------->GT1   ------------>CBF
----DOF2 <---------REM1(1)   <---------AHL20(2)---------->DOF2   --------->AHL20(2)            <----
 
ttgtcttagtcggtgtagagcccaattgttgttttattttttaataatgcaaaagtattaagcgataaataaataagcatcgcaatcgtcccaaaactgt  19575500
                                          <----------DOF2
                                    <---------ZAT18
                                    --------->ZAT18
                                 *TSS     <---------DAG2
                                ------->MYC2
                                <-------PIF4
                                <-------MYC3
                                ------->PIF4
                                ------->MYC3
                                <-------PIF5
                                <-------MYC4
                                ------->PIF5
                                ------->MYC4
                                <-------MYC2
                               --------->TGA1a
                               <---------TGA1a
                               --------->O2
                               --------->ANAC55(2)
                               <---------ANAC55(2)
                               ======================bZIP_DOF                             --------->O2
                               ======================bZIP_DOF                             <---------ANAC46
                               <---------O2                                               <---------O2
                              ------------>OsbHLH66                                    ----------->HVH21
                             <------------OsbHLH66                          --------->AHL20(1)
     --------->At4g35610   --------->ANAC58                                 <---------AHL20(2)
     <---------At4g35610   --------->ANAC58       ---------->DOF2           --------->AHL20(2)
-----ANAC46            <---------ZAT6  <---------ALFIN1                     <---------AHL20(1)
 
gtgtatgcatcagacatgagcatatagagtaagcacgtgtccacactttttcacaaagttatctaaaaacaaaaaacaattaattagcattcgacgtgta  19575600
             --------->REM1(2)
           <-------PIF5
           ------->MYC2
           <-------MYC2
           <-------MYC3
           ------->MYC3
           <-------MYC4
           ------->PIF5
           ------->MYC4
          <---------TGA1a
          ==============================bZIP_DOF
          --------->TGA1a
          <---------O2
          <--------ABF1
          --------->O2
          ==============================bZIP_DOF
          <---------ANAC46                                               <-----------GT1
          <---------ANAC55(2)                                           --------->KAN4(2)
         ------>NtERF2                                                <---------YAB1
        <---------ALFIN1            <---------ANAC58               ------>ZmHOX2a(1)      <---------ZAT2
      <-----------------PIF3(1)     <---------ANAC58               <---------YAB1         <---------At4g35610
     --------->ANAC46         <---------DAG2                       --------->ICU4         --------->ZAT2
     --------->ANAC58         <----------DOF2                    ----------->RAV1(2)     ------>MYB83
     --------->ANAC58        <----------DOF2              <---------ARR11(3)             ------>MYB46(1)
 <-----------GT1           ---------->ID1<<<<<<<<<TBF1    --------->ARR11(3)    <----------DOF2
 
catatcactcgccacgtgtacaagagccttggcctttttgcttcttcttcttgtctattaatatcatctcctgattatactctcttttgaccaagctgct  19575700
                                                                                                   <
                                                                                                  <-
                                                                                                  --
                                                                                                 ---
                                                                                                 <--
                                                                                                <---
                                                                                                ----
                                                                                               <----
                                                                                              <-----
                                                                                              ------
                                                                                              ------
                                                                                              <-----
                                                                                             <------
                                                                                             ------>NtERF2
                                                                                            <-------
                                                                                      --------->ARR14(2)
                                                                                      <---------ARR14(2)
                                                                                     --------->At4g35610
                      <-----------ARR10                                       <------ZmHOX2a(1)<----
                     <---------CCA1(2)        --------->GLK1(2)       --------->ARR14(2)   <--------
               <---------ARR11(3)            <---------GLK1(2)        <---------ARR14(2)   ---------
          --------->MYB46(3)            --------->TOE1(2)             <---------GLK1(2) <---------At5g28300
 
tcttctccatctatccaacatctcaaatctcagtaatcttgttccttcgattctgttttggacgtttgtaatggattctcaggacatcagataccgcggc  19575800
  ----------->RAV1(1)
 --------->ANAC58
 ----------->HVH21
 --------->ANAC58
---------ATERF1(1)
--------ARR14(2)
------->ARR14(2)
------>ATERF1(1)
----NtERF2
------ATERF1(1)                                            ----------->RAV1(1)
----->LBD16                                            <---------bZIP60(1)
-----DEAR3(1)                                          <---------ETT(2)
----LBD16                                            ------>NtERF2
--->ATERF1(1)                                       --------->DEAR3(1)
>NtERF2               ------>NtERF2                 --------->WRKY12
-NtERF2              <---------DEAR3(1)             ----------->TGA1                      <---------DEAR3(1)
---ATERF1(1)        --------->RAP2.6(3)             ----------->HVH21                    --------->ATERF1(1)
--DEAR3(1)         ------->GAMYB ----------->HVH21--------->At4g35610          ---------->DOF2     <
-----ANAC46       ----------->HVH21           --------->DAG2                <------ZmHOX2a(2)      -
-LBD16            --------->MYB46(3)       <------ZmHOX2a(1)           --------->ANAC46<---------DEAR3(1)
>LBD16     --------->At4g35610  <------NtERF2---------->DOF2  ---------->DOF2--------->YAB1       <-
 
ggagacgacagagacgctgcaacgacggctatggccgagacagagaggaaaagcgctgacgacaacaaaggaaaacgcgatcaaaagagggcgatggcga  19575900
                                    ------>ZmHOX2a(1)
                                  ----------->RAV1(2)
                                 ------>NtERF2
                                --------->ARR14(2)
                                <---------ARR14(2)
                               <---------At4g35610
                              <---------RAP2.3(1)
                              <---------RRTF1(1)
                             <---------RRTF1(2)
                             <---------RAP2.3(3)
                             <---------RAP2.3(2)                                        --------->LBD16
                             <---------RAP2.6(2)                                       <---------ANAC55(2)
                             <---------ANAC58                                          <---------ANAC46
                             <---------ANAC58                                       --------->ARR14(2)
                             <---------ANAC46                               --------->ANAC58
                            <---------LBD16                            <------NtERF2<---------ARR14(2)
                         <-------GAMYB                               --------->ANAC46 <---------LBD16
                        <---------MYB46(3)                          ------>ZmHOX2a(1)--------->CCA1(2)
                       <---------ANAC46                             <---------LBD16 --------->ARR11(1)
                      <---------At4g35610                      --------->GLK1(1) <---------ANAC46
                     ------------>AtMYB77                  <---------ANAC55(2) --------->MYB52(1)
-------MYC3   ----------->HVH21--------->ATERF1(1)         <---------ANAC46 --------->ANAC58
------>MYC3   ----------->TGA1<---------ATERF1(1)          --------->ANAC55(2)----------->HVH21
--------O2   XXXXXXXXXXXXXXXXXXXXXXX>MIR404 ----------->HVH21 ------->TEIL  --------->ANAC46
 
aacgtggtctcaagtctctgacggtagcggttgcggctcctgtgctcgtgacgctcttcgctacgtatttcctcggcacaagcgacggatacgggaatcg  19576000
<- Previous    Next ->

AGI:  At2g47760.1   
Description:  ALG3 family protein. similar to unknown [Populus trichocarpa] (GB:ABK95338.1); contains InterPro domain ALG3; (InterPro:IPR007873)
Range:  from: 19572605    to: 19575335    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At2g47770.1   
Description:  benzodiazepine receptor-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO39983.1); contains InterPro domain TspO/MBR-related protein; (InterPro:IPR004307)
Range:  from: 19575534    to: 19576577    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version