Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ZAT14        --------->ZAT14        --------->ZAT18              --------->At4g35610                                            -        <---------ZAT14              --------->ZAT2               <----------DOF2               -----    --------->ARR14(2)               <---------ZAT2              <---------DAG2                ------ --------MYB52(1)               <---------GLK1(1)          <---------CCA1(2)                  ------- ->ANAC46    --------->ZAT14  <------ZmHOX2a(1)  --------->MYB52(1)                          <-------   agttaagttctgcactgcagagtaaacatagaggaaacctgctggataaaccaatggccctgtatcgcctttcaagttcccatagtctctctctcccccg  19574900                                                                              ----------->HVH21               --------------->AGL15                                      >>>>>>>>>>>>WRKY18               <---------------AGL15                                    <---------WRKY18(1)      <---------MYB52(2)                                               ----------->HVH21     ------>MYB83                                                      --------->WRKY38(1)          -     ------>MYB46(1)                                                   --------->WRKY45       <------ -------->GLK1(1)                                                      --------->WRKY12    ---------- ---->LBD16  ------>MYB46(1)                                         <---------At4g35610  <---------- --->LBD16   ------>MYB83                                        ----------->RAV1(1)   ----------->RAV1(2) -->LBD16 ----------->RAV1(2)        ---------->DOF2            --------->MYB46(3)    -------->P    - --LBD16 -------->P       --------->AHL20(2)          <----------DOF2--------->At4g35610--------->TOE2(2)   agaaacccactaacctgccccaattagataaatttcacttaaagactactagtttactttgaagaaaccacagttgaccattgacacttacctgtgacat  19575000                                                                                         --------->ANAC58                                                                                         --------->ANAC46                                                                                         --------->ANAC58                         <-------GAMYB                                               --------->ANAC55(2)                        --------------->AGL15                                        --------->ANAC46                        <---------------AGL15                                        <---------ANAC55(2)                       <-----------------AGL1                                        --------->ANAC55(1)               ------>ZmHOX2a(2)                <------MYB46(1)                      --------->ANAC58 -------->ANAC58  <---------ANAC58              ----------->GT1                      --------->ANAC58 ---ANAC46   --------->ARR11(3)                 <------MYB83                       --------->CCA1(2) ->HVH21     <---------ARR11(3)              >>>>>>>>>CBP60g                      <---------ARR14(2) -HVH21   <---------ATHB12  ---------->DOF2  >>>>>>>>>SARD1           ------->TEIL--------->ARR14(2) -------->ANAC58  <---------ANAC58   ----------->TGA1     --------->TOE2(2)  <---------LBD16        -   gtaagcatcccaatcgatcttcgtgtctgttaaaggcaaatgacgaaatttggtttaaaacctatgcaaatgcacatttcgagggatacgcaagcaaaaa  19575100                                                                   --------->ICU4      ----------->GT1                                <------ZmHOX2a(1)                        <------ --------->DAG2                          <---------ICU4           --------->ANAC58       <---------ARR14(2) --------->DOF2   ----------->HVH21   --------->YAB1<---------YAB1--------->ANAC58       --------->ARR14(2)   aaaaaaggaggtaaatagctctcacatggaacataggcgataataagtgcgactaggattgcatcagcaagaattagcgcgaatgcgaatggaactgcag  19575200                                                                                   <------NtERF2                                          <---------ATERF1(1)                     --------->RAP2.6(2)                                          ------>NtERF2                           --------->ANAC58                                         <---------DEAR3(1)                       --------->ANAC46                                        --------->ATERF1(1)                       --------->ANAC58                                        <------NtERF2                            --------->MYB46(3)                                       --------->MYB52(1)                        --------->DEAR3(1)                                       ------>NtERF2                            --------->ATERF1(1)                                       <---------ATERF1(1)                      <---------ATERF1(1)                                      ------->GAMYB                             <---------DREB2C(1)                                      ----------->HVH21                         <------NtERF2                                     --------->MYB46(3)                         --------->DREB2C(1)                                     --------->DEAR3(2)                        --------->PCF2                                    <---------At4g35610                        <---------ATERF1(1)                                    --------->At4g35610                        ------>NtERF2                        ---------->ID1--------->DEAR3(1)                       <---------RAP2.3(1)                     <-------TEIL   <---------ZAT2                            <---------RAP2.6(2)                 ------>ZmHOX2a(2)  --------->ZAT2                            --------->DEAR3(1)                 ===================HOX2a_HOX2a                              --------->RAP2.3(1)                ====================HOX2a_HOX2a                              --------->ATERF1(1)                <------ZmHOX2a(2) <-----------RAV1(2)                       <---------ATERF1(1)               <---------ARR14(2) <---------ALFIN1                    ----------->HVH21            ========================HOX2a_HOX2a      --------->At4g35610 <---------bZIP60(2)            ------>ZmHOX2a(2)------>ZmHOX2a(1)  --------->HSFB2a(2) --------->LBD16------>NtERF2 -----RAV1(2)  --------->ARR14(2)--------->LBD16<---------HSFB2a(2)<---------DEAR3(1)  --------->AtLEC2   gttttttgaatagatcggatcgattcgtctccttccccagccgacggctacgagaagctctcaaactcgccggtgatgaggcgcccgccatgaaaacaga  19575300                                   *TSS                                 ------->GAMYB                                --------->MYB46(3)                              --------->MYB52(1)                             ----------->HVH21                           --------->ANAC55(2)                           --------->bZIP60(2)                           --------->ANAC58                           <---------ANAC55(2)                           --------->ANAC58                           --------->ANAC46                          ------>NtERF2                          --------->LBD16                          <------NtERF2                         <---------ANAC46                         --------->DEAR3(1)                        <-----------------------TaNAC69(2)                       ------->GAMYB                      --------->DEAR3(1)                      --------->ANAC46                                                 <------------CBF                    <---------ATERF1(1)                                            ------->TEIL                    --------->MYB52(1)                                       <---------AHL20(2)                   <---------WRKY38(1)                        <---------YAB1<---------AHL20(2)                  --------->MYB46(3)               <-----------GT1          --------->AHL20(2)<------   gcaaatcgcatcagcgtctagccaacgccgcgtaacagacaactacttccatattactactcttctaattagcccaaattaaatgagcctattgggcttc  19575400                  ------------>CBF           <---------ZAT14                <---------ICU4           --------->REM1(2)              -------->HAHB4           --------->ZAT14               --------->ICU4                           <---------ATHB12        <------MYB46(1)                  <---------ATHB51               --------->ANAC58        <---------DEAR3(2)             --------->YAB1                   --------->ANAC58        <------MYB83 <------------CBF <---------AHL20(2)           --------->AHL20(2)       <---------DREB2C(2)           <---------AHL20(2)           --------->AHL20(2)       <---------DEAR3(1)            --------->AHL20(2)     ----------->GT1   ------------>CBF ----DOF2 <---------REM1(1)   <---------AHL20(2)---------->DOF2   <---------AHL20(2)            <----   ttgtcttagtcggtgtagagcccaattgttgttttattttttaataatgcaaaagtattaagcgataaataaataagcatcgcaatcgtcccaaaactgt  19575500                                           <----------DOF2                                     --------->ZAT18                                     <---------ZAT18                                  *TSS     <---------DAG2                                 <-------MYC3                                 <-------PIF5                                 ------->MYC2                                 <-------MYC2                                 <-------PIF4                                 ------->PIF4                                 ------->MYC3                                 ------->PIF5                                 <-------MYC4                                 ------->MYC4                                --------->O2                                --------->TGA1a                                <---------TGA1a                                --------->ANAC55(2)                                <---------O2                                <---------ANAC55(2)                                        --------->O2                                ======================bZIP_DOF                             <---------ANAC46                                ======================bZIP_DOF                             <---------O2                               ------------>OsbHLH66                                    ----------->HVH21                              <------------OsbHLH66                          <---------AHL20(1)      --------->At4g35610   --------->ANAC58                                 --------->AHL20(1)      <---------At4g35610   --------->ANAC58       ---------->DOF2           <---------AHL20(2) -----ANAC46            <---------ZAT6  <---------ALFIN1                     --------->AHL20(2)   gtgtatgcatcagacatgagcatatagagtaagcacgtgtccacactttttcacaaagttatctaaaaacaaaaaacaattaattagcattcgacgtgta  19575600              --------->REM1(2)            ------->MYC3            <-------MYC3            <-------MYC2            ------->MYC4            <-------MYC4            ------->PIF5            ------->MYC2            <-------PIF5           <---------TGA1a           --------->O2           --------->TGA1a           <--------ABF1           <---------ANAC46           <---------O2           <---------ANAC55(2)           ==============================bZIP_DOF                         <-----------GT1           ==============================bZIP_DOF                        --------->KAN4(2)          ------>NtERF2                                                <---------YAB1         <---------ALFIN1            <---------ANAC58               ------>ZmHOX2a(1)      <---------At4g35610       <-----------------PIF3(1)     <---------ANAC58               --------->ICU4         --------->ZAT2      --------->ANAC58         <----------DOF2                      <---------YAB1         <---------ZAT2      --------->ANAC58         <---------DAG2                     ----------->RAV1(2)     ------>MYB83      --------->ANAC46        <----------DOF2              --------->ARR11(3)             ------>MYB46(1)  <-----------GT1           ---------->ID1<<<<<<<<<TBF1    <---------ARR11(3)    <----------DOF2   catatcactcgccacgtgtacaagagccttggcctttttgcttcttcttcttgtctattaatatcatctcctgattatactctcttttgaccaagctgct  19575700                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              ------>NtERF2                                                                                              <------                                                                                             <-------                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                                                                      --------->At4g35610                       <-----------ARR10                                       <------ZmHOX2a(1)<----                      <---------CCA1(2)        --------->GLK1(2)       --------->ARR14(2)   <--------                <---------ARR11(3)            <---------GLK1(2)        <---------GLK1(2)    ---------           --------->MYB46(3)            --------->TOE1(2)             <---------ARR14(2)<---------At5g28300   tcttctccatctatccaacatctcaaatctcagtaatcttgttccttcgattctgttttggacgtttgtaatggattctcaggacatcagataccgcggc  19575800  Previous    Next  AGI:  At2g47760.1    Description:  ALG3 family protein. similar to unknown [Populus trichocarpa] (GB:ABK95338.1); contains InterPro domain ALG3; (InterPro:IPR007873) Range:  from: 19572605    to: 19575335    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g47770.1    Description:  benzodiazepine receptor-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO39983.1); contains InterPro domain TspO/MBR-related protein; (InterPro:IPR004307) Range:  from: 19575534    to: 19576577    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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