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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                     <---------ARR14(2)
                                                                                     <---------GLK1(2)
                                                                                  --------->ANAC58
                                                                                  --------->ANAC58
                                                                                 <---------LBD16
                                                                              ------>NtERF2
                                                                             --------->LBD16
                                                                             --------->ANAC46
                                                                             ------>NtERF2
                                                                           <---------LBD16
                                                                        <---------GLK1(1)        <--
                                                                        <----------DOF2          <--
                ----------->RAV1(2)             <---------ANAC58       <---------ANAC58          ---
---------At4g35610                   <<<<<<<<<TBF1         --------->GLK1(1)<---------RAP2.6(2)  <--
-------->At4g35610         <---------ARR14(2)   <---------ANAC46       <---------ANAC58  <---------YAB1
->LBD16<---------YAB1      --------->ARR14(2)   <---------ANAC58  <---------MYB52(1) --------->ARR14(2)
 
tcagctcattttgattcccccctggtttagtatcggcttcttcttctacttgagtgtttgggaaattcagtttggctttccggccacggattttgatggc  19510200
                               --------->ARR14(2)
                               <---------ARR14(2)
                              <-------GAMYB
                             <---------MYB46(3)
                             <---------DEAR3(2)
                            <---------DEAR3(1)                                         ------>NtERF2
                           <------NtERF2                                              --------->DEAR3(1)
                          <---------DEAR3(2)                                        <---------At4g35610
                          <---------RAP2.3(1)                                  <---------GLK1(1)
                          ------>NtERF2                                        <---------HSFB2a(1)
                          <---------ERF1                                       --------->GLK1(1)
                          <---------ORA47(2)                                   --------->HSFB2a(1)
                  --------->HSFC1(2)                                          --------->ARR14(2)
                  <---------HSFB2a(1)                                         <---------ARR14(2)
                  <---------At4g35610                              <---------LBD16  --------->At4g35610
                  <---------HSFC1(2)                      <---------ALFIN1    --------->GLK1(2)
       <---------TOE2(2) <---------DREB2C(2)             <-------TEIL         <-----------ARR10
       <---------TOE1(2) <---------RAP2.3(3)          <---------ANAC55(2)     ------->TEIL
     <---------SPL7      <---------DEAR3(1)           --------->ANAC55(2)  --------->ANAC58
    <---------ANAC46     <---------At1g77200          --------->ANAC58     --------->ANAC55(2)
  <-----------HVH21    <-----------HVH21              --------->ANAC58 <-----------HVH21
 --------->bZIP60(2) <-------TEIL                    --------------->AtSPL3<---------ANAC55(2)
-------At4g35610  <---------ZAT2             --------->ANAC46     <---------ANAC58 --------->ANAC46
-------ZAT2       --------->ZAT2             --------->ANAC58     <---------ANAC58<---------LBD16
------>At4g35610  --------->At4g35610        --------->ANAC58 <----------DOF2<---------GLK1(2)
----NtERF2     <---------At4g35610<---------YAB1     --------------->AtSPL8--------->ANAC58        <
 
agcaacgtcgtaggctcgagcagcttcgtcggcggttttgaatgtgccaagccagacacgtacacctttgctcgggtcacgaatctccgctgcccatttg  19510300
                                                                                            --------
                                                                                           <--------
                                                                                        --------->YAB1
                                                                                   --------->LBD16
                                                                                  ----------------->AG
                                                                                  <---------HSFB2a(2)
                                                                                  --------->HSFB2a(2)
                                                                                  ----------------->AGL1
                                                                                 ----------------->AGL1
                                                                                 ----------------->AGL2
                                                                                 <---------LBD16
                                                                            --------->ARR14(2)
                                    ------>ZmHOX2a(1)                       <---------ARR14(3)     <
                             --------->GLK1(2)                              <---------ARR11(3)     -
           <---------DAG2   <---------ARR14(2)                              <-----------ARR10      -
         ------>NtERF2<---------ZAT14                                       --------->ARR14(3)   <--
      <---------At4g35610   --------->ARR14(2)             --------->ZAT14  --------->ARR11(3)   ---
      --------->At4g35610   <---------GLK1(2)         <----------DOF2       <---------ARR14(2) -----
---------ALFIN1       --------->ZAT14             <---------CCA1(2)       ----------->ARR10---------
 
ccccatggcctctgccttatccctctgtacagattcttcctctctcgtttcccatctctttcttcactcactgttcgaagatattcccgaatcagaaacg  19510400
     <------MYB46(1)
     <------MYB83
    <---------TOE2(3)
    --------->MYB59
->MYB52(1)                                                                    <---------At4g35610
-ARR14(2)    --------->YAB1                                     --------->ANAC46
---------ARR11(3)                                 --------->TOE1(2)        <---------At4g35610
-------->ARR11(3)                                ----------->RAV1(2)       <---------ZAT2
-------->AHL20(1)   <----------ID1           <---------REM1(1)<-----------GT1 --------->At4g35610
-------ARR14(2) --------->AHL20(2)        --------->ALFIN1   <---------ARR14(2)               ------
------>ARR14(2) --------->YAB1         --------->DAG2   <---------ANAC46  ------>ZmHOX2a(1)   ------
------>GT1  <---------YAB1            ---------->DOF2----------->HVH21  ----------->RAV1(2)   ------
>ARR14(2) --------->YAB1      --------->ANAC46  ------->TEIL --------->ARR14(2)  --------->MYB52(1)
 
gatatattaggttttataataaaaaaacaaaactcgaaaccaaaagtgttgtacctgagacgggtttacgcttcttcctgctgctaacagagccgagttg  19510500
                                                 ----------->RAV1(1)
                                                 <---------ALFIN1
                                      --------->YAB1
  --------->ARR14(2)                  --------->ATHB12
  <---------ARR14(2)                 <---------YAB1<---------ALFIN1
--->WRKY12             --------->At4g35610--------->At4g35610
--->WRKY38(1)        <-----------RAV1(2)  <---------At4g35610              --------->ANAC46
----->HVH21   --------->GLK1(1)--------->YAB1   --------->ANAC46         <-----------GT1       <<<<<
 
actcggttctgactcagatttcgaccagatgaaatcagaaatgatagctcccccacacatttttgttttttgttttttacgcttccaactccaaactaga  19510600
             <---------ARR14(2)                  --------->ARR14(2)
           <----------DOF2                       <---------ARR14(2)
          <---------ANAC46                       --------->GLK1(2)                                 -
          <---------ANAC58            *TSS---------->DOF2                                         <-
     --------->ARR14(2)             ---------->DOF2                                              <--
     ------->TEIL                 ------>ZmHOX2a(1)                                <---------REM1(1)
     <---------ARR14(2)          --------------->AGL15                             <---------MYB46(3)
  --------->ANAC55(2)            <---------------AGL15                ------------>CBF           <--
  <---------ANAC55(2)           ----------------->AGL2     <-----------TBP         <-----------RAV1(1)
<<ZML2    <---------ANAC58      ----------------->AGL1   <-----------TBP   <-----------HVH21     <--
 
acaagacgtatttgcgttttcgtttttgaaccgagtcctaaaagagaaagagaatttgggttttatatagtgagacaatgtcagagttgttgctgttttt  19510700
                                                                             -------->P
                                                                            ------->GAMYB
                                                                   <----------DOF2
                                 <---------ARR11(3)     <---------ZAT14    <---------MYB52(2)
          --------->ARR11(3)     --------->ARR11(3)     --------->ZAT18    <---------MYB55(2)
          <---------ARR11(3)<---------YAB1            <---------ZAT18      --------->MYB46(3)      -
---------->HVH21       <----------DOF2                --------->ZAT14      <---------MYB111(1)     <
--------WOX13(1)<---------HSFB2a(2)              <---------At5g28300       <---------MYB46(2)    ---
-------ANAC58   --------->HSFC1(1)              <-----------GT1   <---------DAG2            <-------
-------AtLEC2   --------->HSFB2a(2)       <---------DAG2<---------ZAT18    <---------MYB111(2)  <---
-------ANAC58   <---------HSFC1(1)        <----------DOF2      <-----------GT1<---------YAB1--------
 
gcttgacgaccaagttcttctagaaacttttattaatatcatctactttatttactgtgtgctctataaccttttgcaactaccattaacaacttataaa  19510800
            --------->WOX13(1)
    ----------->GT1                                           <-----------GT1
--------->YAB1                                             --------->ATHB51
<---------ICU4      <---------GLK1(2)                      <---------AHL20(2)                  <----
-------->ICU4  --------->YAB1             --------->TOE2(3)--------->AHL20(2)                  <----
---------YAB1 <---------ATHB12            --------->YAB1  --------->ICU4                       -----
------>YAB1--------->AHL20(2)             --------->TOE1(3)<---------ICU4                      <----
--YAB1 <---------AHL20(2)        --------->ATHB12    --------->YAB1                            <----
------AHL20(2)<---------YAB1    <---------YAB1       --------->TOE2(3) <---------ALFIN1 <-----------GT1
->AHL20(2) <---------AHL20(2) --------->YAB1      <----------DOF2      ----------->RAV1(1)     -----
 
taataataagttaattaatcatagaatttgcagttatcatttgaaccataacgctttcttaattatttctactcccacatcaaatactatattacatggc  19510900
                                                               --------->ANAC55(1)
             <---------MYB59                                   --------->ANAC55(2)
    <---------ICU4                                       --------->AHL20(2)
   --------->AHL20(2)                                  ----------->GT1
 --------->YAB1 <---------GLK1(2)                    <---------AtLEC2             --------->ANAC58
 --------->TOE2(3)                                 --------->AtLEC2            --------->ZAT14   ---
-----ANAC58------>MYB83                            <---------YAB1      <---------YAB1          -----
-----ANAC58------>MYB46(1)                       --------->YAB1<---------ANAC55(2)--------->ANAC58
---->ANAC55(2) ------>MYB83                      <---------ICU4<---------ANAC55(1)--------->ANAC46
-----ANAC55(2) ------>MYB46(1)                  <---------ATHB12     --------->YAB1         <-------
-----ANAC46-------->P                   <---------AHL20(2)    <-------TEIL     <---------ZAT14 -----
------>GT1------>ZmHOX2a(1)         <---------AHL20(2)------->TEIL------->TEIL <---------ZAT18------
 
gtaatattaattcctaccaaattcttctatttgttttagttaatttatctaatcatgcatgtaaatacgtatttataaatacttcactcaagaattaacc  19511000
                                             <---------ZAT6
                                           <---------ANAC46
                                         <---------ZAT14       <---------YAB1
                                         --------->ZAT14     <---------ICU4
                                      <---------ANAC46      --------->ICU4
                                      <------MYB83          <---------YAB1
                                      <------MYB46(1)     --------->ATHB51                 <------MYB83
                                   <---------ANAC58       <---------ICU4                   <------MYB46(1)
                                  --------->ZAT2          <--------HAHB4                  <---------TOE2(3)
                                  <---------STY1(2)       --------->YAB1                  --------->MYB59
                                  <---------ZAT2          <--------ATHB1             <---------AHL20(2)
                                  --------->STY1(2)       -------->HAHB4             <---------YAB1
                                ------>ZmHOX2a(1)        <---------ATHB51           --------->YAB1
    --------->At5g28300       ------>ZmHOX2a(2)          <---------YAB1             --------->AHL20(2)
   ----------->GT1           <------ZmHOX2a(2)         --------->YAB1               <---------AHL20(1)
------>ANAC46               <-----------ARR10<---------ANAC46--------->YAB1       --------->ICU4
---->TOE2(3)                --------->ARR14(2)    <---------YAB1               <------ZmHOX2a(2)   -
----GT1                     <---------ARR14(2)    --------->ICU4--------->YAB1 ------------>CBF    <
-->GAMYB           ------------>CBF<---------ANAC58 ----------->GT1        --------->HSFB2a(2)  <---
--->MYB46(3)      <-----------------AGL1<---------REM1(1)--------->ICU4    <---------HSFB2a(2)  <---
 
acaaaacagtaattccttccttctcaattcggatcctagcttggtgtagtgtgatgagtaataattatcaaaacatttctcgatcaatattattaggttt  19511100
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AGI:  At2g47520.1   
Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF071 (ERF071) [Arabidopsis Thaliana] (GB:O22259); similar to ATEBP/ERF72/RAP2.3 (RELATED TO AP2 3), DNA binding / protein binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT3G16770.1); similar to hypothetical protein OsI_001568 [Oryza sativa (indica cultivar-group)] (GB:EAY73721.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471)
Range:  from: 19509872    to: 19510639    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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