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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                     ------->TEIL                             --------->MYB52(1)
--------->YAB1 --------->ARR14(2)                            --------->RVE1(1)     <-----------RAV1(1)
---------ATHB12------->TEIL       <---------LBD16      <------ZmHOX2a(1)<-----------HVH21 <---------
--ZAT18        <---------ARR14(2) *TSS              <---------LBD16 --------->MYB52(2)  <---------PCF2
->ZAT14       <---------CCA1(2)<-----------GT1   --------->RVE1(1)<---------MYB52(1)   ----------->TCP11(1)
--ZAT14  ------>NtERF2   ------->TEIL<------ZmHOX2a(1)----------->GT1 <---------ZAT6 --------->ALFIN1
 
taatcaaaacgacgactgtatctgtatgtatttttaaccaggaaaacaaaaaatatcaggaaaaatatcggtagtggtcactgcttatgtgggccttatc  19453500
                                                                                                   <
                                                                                                 ---
                                                                                                 <--
                                                                                                 ---
                                                                                                 ---
                                                                                                 ---
                                                                                                 <--
                     --------->LBD16                                                             <--
                     ------>ZmHOX2a(1)                                                          <---
                     <---------HSFB2a(2)                  <----------DOF2                       <---
                     --------->HSFB2a(2)                  <---------DAG2                        ----
                    <---------LBD16     --------->ANAC46 <---------DAG2                    ---------
                   <---------ANAC46   <---------YAB1  <---------ALFIN1                --------->AHL20(2)
-DOF2 <---------MYB52(2)            --------->YAB1  ------>ZmHOX2a(1)     --------->AHL20(2)  <-----
 
tatggcccaactagcgcttatttcctggaatatggcccattataagtcagtcgtcctccccctttttctcaacaaaatgaaatactcaaaaatatagtaa  19453600
    --------->AHL20(2)
    --------->AHL20(1)
    <---------AHL20(1)
    <---------AHL20(2)
 <---------AHL20(2)
 --------->AHL20(2)
<---------AHL20(2)
--------->AHL20(2)
---------YAB1
----->ATHB1
-------ICU4
------>YAB1
------>ATHB51
----->HAHB4
------HAHB4
-------AHL20(2)
------YAB1
------ATHB51    <---------DAG2                                           <---------YAB1
----->ICU4      <----------DOF2                 <---------HSFB2a(2)      <---------AHL20(2)
-->GT1 <---------YAB1                      <---------ICU4    --------->YAB1                  -------
----ICU4  <---------YAB1                --------->YAB1      <---------YAB1  <---------YAB1   <------
 
ttattaatttattatgctacttttcatgagaagtttatgtctatgaaaattacagaagagaaaatgataacaaatttttattatttcagtcaaaaattaa  19453700
                                                         --------->LBD16
                                                        --------->LBD16                        =====
                                                        <---------LBD16           ----------->GT1
                                              <---------AHL20(2)           --------------->AGL15
                                              --------->AHL20(2)           <---------------AGL15
                                          --------->AHL20(2)              <-----------------AGL2
        --------->HSFB2a(2)            ----------->GT1 <---------ANAC46   <-----------------AGL3
---------->DOF2                   --------->MYB46(3)   <---------LBD16    <-----------------AGL1
-->AHL20(2)                    <---------WRKY12       <---------LBD16     <-----------------AG <----
---AHL20(2)--------->YAB1      <---------WRKY38(1)<---------ICU4     <---------YAB1            <----
 
aaaaaaagcttctataattttcaagaaaaaatgttcaacggctgataaaataaatattccggggaaaaacttatgtttctcaaattggtagaatactact  19453800
                      ----------->GT1
                    ------->MYC4
                    -------->ABF1
                    ------->MYC3
                    <-------MYC3
                    <-------MYC2
                    <-------MYC4
                    ------->MYC2
                    <-------PIF5
                    ------->PIF5
                   --------->ANAC55(2)
                   <---------O2
                   --------->O2
                   --------->TGA1a                                                     ----------->GT1
                   --------->ANAC46                                                <---------DOF5.7(2)
        <-----------ARR10                                                        <XXXXXXXXXXXXXXXXXX
        --------->ARR11(3)          <------MYB83                                 --------->DOF5.7(2)
        --------->GLK1(2)        <---------ANAC58              <---------ZAT14  --------->TOE1(3)
        <---------ARR11(3)       <---------ANAC58              --------->ZAT18 <---------ANAC55(2)
       --------->RVE1(1)       <---------YAB1           <------------CBF       <---------ANAC46
=============================bZIP_DOF                   <---------ARR14(2)     <---------ANAC58  <--
------DOF2         <---------TGA1a  <------MYB46(1)    <------ZmHOX2a(1)       <---------ANAC58 <---
-----DAG2       <-------TEIL--------->ARR14(2)   --------->CCA1(2)        --------->YAB1       <----
 
ttttgtgaaaaaatctaagtacacgtggcaaaatatgcttggttcttagaagataagaggattgtgttcacagagtttaataacgtgaacgagtatattt  19453900
                                                                         --------->ATERF1(1)
                                                                        --------->ZAT2
                                                                        <---------At4g35610
                                                  ------>NtERF2         <---------ZAT2
                                                 --------->DEAR3(1)     --------->At4g35610
                                                 ----------->HVH21      ----------->RAV1(2)
                                               ------>ZmHOX2a(1)      <-----------RAV1(2)
                                              --------->TOE1(2)   --------->At4g35610
                                              --------->TOE2(2)   <---------At4g35610
       <---------CCA1(2)                   <---------ARR11(3) --------->AtMYB61
XXMIR783                                   <---------ARR14(2) --------->TOE1(3)
---------GT1                           --------->YAB1         --------->YAB1        <-----------HVH21
--------GT1               <----------DOF2  --------->ARR14(2) --------->TOE2(3)    --------->ANAC46
-----AHL20(2)          *TSS       ------>ZmHOX2a(1)          --------->MYB46(3)<------NtERF2     xxx
 
tatcttcttcatctcttcacatcaaaaaacttttctcctccatcaaaatcctccgacgatgacaaccatagctgcagctggcctcaacgtcgcgactcca  19454000
                  <---------ANAC58                                                        <---------TOE1(3)
             --------->ALFIN1                                                             <---------TOE2(3)
             <-----------RAV1(1)                                                      <-------GAMYB
           ----------->RAV1(2)                                                      <---------TOE2(3)
        ----------->HVH21       <-------TEIL                                      <---------MYB46(3)
       --------->SPL7        <------MYB46(1)                                    <-------GAMYB
     <---------SPL7          <------MYB83                    --------->MYB59   <------MYB46(1)
    <---------MYB46(3)      --------->MYB59    <-----------GT1           <---------At4g35610
 <---------MYB46(3) <---------ANAC46    <-------GAMYB      --------->GLK1(2)   <---------MYB46(3)
<---------AtMYB61 <---------ANAC46     ----------->GT1    <---------ARR14(2)   <------MYB83
--------->ALFIN1  <---------ANAC58 <---------SPL7        <---------GLK1(1)    <---------AtMYB61 ----
xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <-----------HVH21--------->LBD16   ---------->DOF2<---------MYB46(3)
 
cgagtggtcgttcgacctgtggctcgtgtattaggtccggtccggttgaattacccgtggaaattcggttcgatgaagcggatggttgtggttaaggcta  19454100
                                                                          <---------At4g35610
                                                                          --------->At4g35610
                                                                       ----------->HVH21
                                                                      <---------MYB52(1)
                                                                     --------->LBD16        <-------
                                                                   <---------LBD16<---------ANAC46
                                                                   ------>ZmHOX2a(2)        <-------
                                                                 --------->ARR14(2)         <-------
                                                               <---------YAB1     --------->ALFIN1
            --------->MYB52(1)                               <---------At4g35610<---------ANAC58
           --------->CCA1(2)                              --------->At4g35610   <---------ANAC58   <
           --------->GLK1(1)                         --------->CCA1(2)<-----------HVH21  <---------RAP2.6(2)
           <---------GLK1(1)                        xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------At4g35610
          --------->ARR11(3)                     <------ZmHOX2a(1)--------->ARR14(1) <---------ZAT14
          <---------ARR11(3)                   <---------TOE2(3) <---------ARR14(2) --------->ALFIN1
     <------ZmHOX2a(1) --------->ALFIN1--------->ANAC46   <---------At4g35610   <---------ANAC46   <
----->REM1(1)       --------->DAG2<---------ZAT14=========================HOX2a_HOX2a--------->REM1(2)
 
catcggaaggagagatatcggagaaggtggagaagagtatacaagaagctaaggagacatgcgctgatgatccggtgagcggggagtgtgtagcggcttg  19454200
                        <---------------------WRI1
                        --------->ATERF1(1)
                        <------NtERF2
                       <---------DEAR4(2)
                       ------>NtERF2
                       <---------ERF1
                       <---------RAP2.3(1)
                       <---------ATERF1(1)
                      <---------ANAC46
                      <---------RAP2.3(3)
                      --------->DEAR3(1)
                      <---------DEAR3(1)
                      --------->ATERF1(2)
                      <---------ATERF1(2)
                      <---------RAP2.3(2)
                     --------->ATERF1(1)
                     ------>NtERF2
                     <------NtERF2
                     <---------ABI4(1)
                    <---------ORA47(2)
                    <---------RAP2.3(1)
                   <---------DEAR3(1)
                   <---------RRTF1(2)
                   <---------RRTF1(3)                               ------>ZmHOX2a(1)
                   <---------RAP2.3(2)                           ===================================
                   <---------RAP2.6(2)                          <---------ARR14(2)
            xxxxxxxxxxxxxxxx>smallRNA(s)                     <------NtERF2
           --------->At4g35610                             <---------PCF2
           <---------ZAT2                                 <------NtERF2                        -----
    --------->ALFIN1<---------ATERF1(1)                   --------->ATERF1(1)                  -----
 --------->ALFIN1 <---------ZAT14                        <---------MYB46(3)                   ------
--ANAC58   <---------At4g35610  --------->AtLEC2         <---------ATERF1(1)                 -------
--ANAC58   --------->ZAT2<---------ANAC46            --------->ALFIN1                  --------->YAB1
--ANAC46 <------ZmHOX2a(1)      <---------YAB1     <---------ZAT2<------ZmHOX2a(2)    --------->ICU4
---------TOE2(1)  --------->ZAT18                  <---------At4g35610                <---------ATHB12
---------TOE1(1) --------->ALFIN1               ---------->DOF2 --------->ARR14(2)    <---------YAB1
 
ggacgaggtggaggagctgagtgcggcggcgagtcatgctagggacaagaagaaagctggtggctccgatcctttggaagagtattgcaatgataatcct  19454300
                          --------->AHL20(2)
                       <---------ICU4
           <---------ANAC46
      <---------ANAC58<---------YAB1                            --------->MYB59
      <---------ANAC58--------->ICU4                            <---------TOE2(3)
    <---------YAB1  --------->YAB1                           <----------DOF2
==HOX2a_HOX2a      <---------YAB1                         ------->TEIL
---->LBD16 <---------ANAC58                            <---------YAB1
->ZmHOX2a(1)    --------->ICU4                       --------->YAB1                ---------->ID1
--->TOE1(2)<---------ANAC58                          <---------ICU4              <---------MYB46(3)-
---->RAV1(2)<---------SPL7<---------AHL20(2)        --------->ICU4       <------ZmHOX2a(2)  --------
 
gagactgatgagtgtcgtacttatgataattaaaaaatatgtttttgatgttcgaattatgaaactttaggtatggatcaatgtttgttcttcttgtccc  19454400
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AGI:  At2g47390.1   
Description:  serine-type endopeptidase/ serine-type peptidase. similar to hypothetical protein OsI_010936 [Oryza sativa (indica cultivar-group)] (GB:EAY89703.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40114.1); similar to hypothetical protein OsJ_010143 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26660.1); contains InterPro domain Peptidase S9, prolyl oligopeptidase active site region; (InterPro:IPR001375); contains InterPro domain Peptidase S9A, oligopeptidase, N-terminal beta-propeller; (InterPro:IPR004106)
Range:  from: 19449062    to: 19453435    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At2g47400.1   
Description:  CP12-1 (CP12 domain-containing protein 1). similar to CP12-2 [Arabidopsis thaliana] (TAIR:AT3G62410.1); similar to putative chloroplast protein CP12 [Brassica rapa] (GB:ABL97989.1); contains InterPro domain Protein of unknown function CP12 (InterPro:IPR003823)
Range:  from: 19453924    to: 19454508    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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