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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-------
MYC3
------->
MYC3
<---------
ANAC46
--------->
O2
<----------
DOF2
------>
NtERF2
-----
MYC2
<---------
ANAC58
-----
MYC3
<---------
ANAC46
--------->
LBD16
---->
MYC2
<---------
ANAC58
--------->
DEAR3(1)
---->
MYC3
--------->
SPL7
<---------
ALFIN1
------
ANAC58
<-------
PIF5
--------->
ZAT14
------
ANAC58
------->
PIF5
<---------
ABI4(2)
-->
MYC3
------->
MYC3
<---------
ZAT14
---
MYC3
<-------
MYC2
<---------
At4g35610
--->
O2
------->
MYC2
<---------
ZAT2
<---------
WRKY12
----
O2
<-------
MYC3
----------->
RAV1(2)
------->
GAMYB
--------->
WRKY18(1)
--->
TGA1a
<---------
ANAC58
--------->
At4g35610
--------->
MYB46(3)
----
TGA1a
<---------
ANAC58
--------->
ZAT2
<---------
DOF5.7(2)
--------
--->
ANAC58
<---------
ANAC46
--------->
ANAC58
--------->
DOF5.7(2)
<---------
WRKY38(1)
--->
ANAC58
<---------
ANAC58
--------->
ANAC58
--------->
TOE2(3)
<-----------
HVH21
<--------
--
ALFIN1
--------->
ANAC46
--------->
LBD16
------->
TEIL
--------->
TOE1(3)
----------->
GT1
<--------
>
ATERF1(1)
<---------
ANAC58
--------->
ANAC46
------->
TEIL
--------->
ICU4
<---------
TOE1(1)
cgtgcctttctccaccatggctcgtgccgcgtgtttgataaacgcagctgcaccgcgaacgttaacagccattatgcggtcaaaccgttcgaggtcaaag
19354900
<----------
DOF2
--------->
LBD16
<---------
ANAC58
--------->
HSFC1(2)
<---------
ANAC46
<---------
ANAC58
--------->
HSFB2a(1)
<---------
ANAC58
--------->
ZAT14
<---------
HSFB2a(1)
<-------
GAMYB
<---------
ANAC55(1)
<xxxxxxxxxxxxxxxx
smallRNA(s)
<---------
HSFC1(2)
------>
NtERF2
<---------
ANAC58
<---------
ZAT18
<------
ZmHOX2a(1)
--------->
LBD16
--------->
ANAC55(2)
--------->
MYB52(1)
-->
DOF2
<---------
LBD16
<----------
DOF2
<---------
ZAT14
<--
-
WRKY38(1)
<---------
MYB46(3)
<<<<<<<<<
MYB2
<---------
ANAC58
--------->
At5g28300
<--
-
WRKY12
--------->
ALFIN1
<---------
DEAR3(1)
<---------
ANAC58
<---------
DEAR3(1)
------>
ZmHOX2a(1)
tcgaggaagctttccagtggttccaagactccggcgttgctaaacagaacgtctagctttccgtgtttttcgacggtgaacttaactgcgtcctcgactt
19355000
-
<---
<------
<---------
WRKY12
--------->
DOF5.7(2)
--------->
TOE2(3)
--------->
At5g28300
<------
ZmHOX2a(2)
--------->
ANAC58
<
----------->
GT1
--------->
LBD16
--------->
ANAC46
-
<---------
O2
<---------
HSFB2a(2)
--------->
ANAC58
-
--------->
O2
--------->
HSFB2a(2)
--------->
SPL7
----
<-----------
HVH21
<----------
DOF2
----------->
HVH21
------->
TEIL
-----
-------
ANAC58
------->
GAMYB
<----------
DOF2
--------->
YAB1
<---------------
AtSPL3
-------
ANAC58
--------->
MYB52(1)
---------->
ID1
--------->
TOE1(2)
<---------
ARR11(3)
--------->
YAB1
ccgtctcatttgtcacatcgcaacggtaaaaactagctttgtctttcccgatcaaaactgcgacgttttggcctagttcttcttgtacgtcaactataac
19355100
<------
NtERF2
--------->
At4g35610
--------->
ATERF1(1)
<---------
At4g35610
<---------
RAP2.3(1)
<---------
ICU4
------>
NtERF2
--------->
YAB1
<---------
ATERF1(1)
--------->
ICU4
<---------
DEAR3(2)
--------->
YAB1
<------
NtERF2
----------->
RAV1(2)
<-----------
HVH21
--------->
LBD16
--------->
LBD16
<---------
SPL7
------>
NtERF2
<---------
ANAC46
<---------
O2
--------->
DEAR3(1)
<---------
ANAC58
<---------
DEAR3(1)
<---------
ALFIN1
<---------
ANAC58
--------->
O2
--------->
ATERF1(1)
<---------
At4g35610
--------->
DEAR3(1)
<------
NtERF2
<---------
ZAT2
<---------
ANAC46
--------->
DEAR4(2)
--------->
At4g35610
<---------
RAP2.3(1)
<---------
RAP2.3(1)
--------->
ZAT2
--------->
MYB46(3)
------>
NtERF2
<---------
ATERF1(1)
-------->
AtMYB61
<---------
ZAT14
------>
NtERF2
<---------
At4g35610
------
ALFIN1
<---------
ANAC46
<------
NtERF2
----------->
RAV1(2)
<---------
ANAC58
-----
GT1
--------->
LBD16
--------->
MYB52(1)
--------->
At4g35610
<-----------
GT1
---------
DAG2
<---------
ANAC58
--------->
ATERF1(1)
<---------
ATERF1(1)
------>
ZmHOX2a(2)
-------->
TOE2(3)
--------->
ZAT14
<---------
ATERF1(1)
--------->
ATERF1(1)
<------
ZmHOX2a(2)
-------->
TOE1(3)
--------->
REM1(2)
<---------
DEAR3(1)
--------->
ARR14(2)
<---------
ARR11(3)
--->
GAMYB
<---------
ANAC55(2)
--------->
ATERF1(1)
<---------
ARR14(2)
--------->
ARR11(3)
<------
---->
MYB46(3)
<---------
ANAC58
--------->
RAP2.3(1)
------>
NtERF2
<---------
YAB1
<---------
ANAC58
caccttagctccgtggtccgtgaacagcctagcggcgtcggctccaatcccgctggctccgcctgttataattacgatcttgccttccaat
ctactgcat
19355200
<---------
ICU4
--------->
ATHB51
--------->
ATHB12
-------->
ATHB1
<---------
AHL20(2)
-------->
HAHB4
<---------
ATHB51
--------->
ICU4
<---------
YAB1
--------->
AHL20(2)
----------->
RAV1(2)
--------->
ANAC58
<---------
ANAC58
--------->
ANAC55(2)
<---------
ANAC58
--------->
ANAC58
<---------
ANAC46
--------->
ANAC55(1)
--------->
ANAC58
------
----------->
GT1
--------->
AtLEC2
--------->
ANAC58
------>
NtERF2
---
<---------
ANAC55(2)
<-------
TEIL
--------->
DAG2
----------->
HVH21
---
AtLEC2
<---------
At4g35610
--------->
CCA1(2)
---------->
DOF2
<---------
ETT(1)
ggacaagtaattattgaactgatcaacatttgtatgtaagatacatgcacaattgtttatagagagataaagcaattgc
ctgagtcccgacat
tgatgtg
19355300
---
<---------
AHL20(2)
<--
--------->
AHL20(2)
<---
--------->
ANAC46
<---
--------->
ANAC55(1)
<----------
DOF2
<---------
ZAT14
<---------
ANAC58
<---------
ZAT18
<---------
ANAC58
--------->
ZAT14
<---------
ANAC46
<---------------
AtSPL8
<------------
CBF
<---------
ARR14(2)
<---------
AHL20(2)
*
TSS
--------->
ARR14(2)
<-----------
GT1
--------->
AHL20(2)
--------->
DAG2
<---------
ETT(2)
--------->
ZAT18
--------->
AHL20(1)
--->
ALFIN1
--------->
ETT(2)
--------->
ZAT14
<---------
AHL20(1)
<-
------>
ETT(2)
--------->
AHL20(2)
--------------->
AtSPL8
<-----------
GT1
<---------
tcgaaagg
tatacaaactgagataaaatgtcgactgagtatatgtgtacacttaatttataacccaagagttgcatttcacattttattgcttttaccac
19355400
------->
MYC3
<---------
ALFIN1
--------->
ANAC46
------>
ZAT14
---------->
ID1
-------
ZAT14
------>
ZmHOX2a(1)
--------->
AHL20(2)
-------
DOF2
<---------
ANAC58
<----------
DOF2
--------->
CCA1(2)
------
DAG2
<---------
ANAC58
------>
ZmHOX2a(1)
<---------
ALFIN1
<---------
TOE2(3)
----------
GT1
<-----------
GT1
<---------
AtMYB61
--------->
MYB46(3)
<---------
YAB1
--
GT1
<-------
MYC3
<-----------
GT1
<---------
YAB1
-------->
P
<---------
TOE2(3)
-
tttactccacgttttcttgatttttcctgtcctttttattcttcttgtggtctagctataacttacccacacattttgagatttgaactaagattaaaca
19355500
<---------
At4g35610
--------->
At4g35610
--------->
LBD16
--------->
AHL20(2)
--------->
YAB1
<--------
ATHB1
<---------
ICU4
<--------
HAHB4
--------->
ATHB51
------>
ZmHOX2a(1)
---------->
DOF2
<-----------
GT1
<---------
GLK1(1)
<-------
MYC3
<---------
ATHB12
--------->
ANAC58
------->
MYC3
--------->
AHL20(2)
--------->
ANAC58
------->
GAMYB
----------->
HVH21
<---------
ATHB51
--------->
MYB46(3)
--------->
YAB1
<---------
ANAC55(2)
-------->
ALFIN1
--------->
ICU4
-------->
P
--------->
GLK1(1)
<-----------
GT1
--------->
ANAC55(2)
cggtgttgacatgtgtaaaagaaacaataattaactccgctaaccacgaattgatatcctataacagtctaaatttaaccagtgtttgtgtttaagtaac
19355600
------->
GAMYB
--------->
MYB46(3)
--------->
ANAC58
--------->
ANAC58
------>
MYB83
-------->
P
<--
<----------
DOF2
--------->
AHL20(2)
<--------
--------->
TOE2(3)
--------->
ARR11(3)
<---------
AHL20(1)
--------->
TOE1(3)
--------->
RVE1(1)
--------->
AHL20(2)
<------
ZmHOX2a(1)
------>
MYB46(1)
<-----------
GT1
--------->
AHL20(1)
----------------->
AGL1
--------->
ANAC46
<---------
ARR11(1)
<---------
AHL20(2)
----------------->
AG
<-----------
GT1
--------->
CCA1(1)
--------->
ICU4
<---------
GLK1(1)
-------->
P
------>
MYB83
<---------
ARR11(3)
<-----------
GT1
--------->
AHL20(2)
--------->
GLK1(1)
------->
TEIL
------>
MYB46(1)
<---------
CCA1(2)
----------->
GT1
<---
aaattgatatccacatgaggacatcaacctttaacccaaccaaaaaaatatcccaaatctatatttctatttgctactcatgtgaagtaaatattttatg
19355700
--------->
YAB1
--------->
AHL20(2)
<-------
TEIL
--------->
AHL20(2)
<---------
AHL20(2)
<XXXXXXXXXXXXXXXXXXXX
MIR865-3P
-------
LBD16
<---------
AHL20(2)
--------->
AHL20(2)
<---------
At4g35610
-
AHL20(2)
<----------
DOF2
---------->
DOF2
<---------
AHL20(2)
-----------
------
AtLEC2
--------->
YAB1
<---------
At4g35610
--------->
CCA1(2)
----------->
GT1
<
cctggattcatttccatcatacttttaattcatagttttgagttgataaagacatataaattagatataatttagatgagtttgggaaaaaatagtaagt
19355800
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AGI:
At2g47120.1
Description:
short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT2G47130.1); similar to 3-beta hydroxysteroid dehydrogenase [Digitalis parviflora] (GB:AAV68713.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040)
Range:
from: 19354429
to: 19355308
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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