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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                          <-------MYC3
                          ------->MYC3
                         <---------ANAC46
                         --------->O2
  <----------DOF2       ------>NtERF2
-----MYC2              <---------ANAC58
-----MYC3              <---------ANAC46           --------->LBD16
---->MYC2              <---------ANAC58          --------->DEAR3(1)
---->MYC3            --------->SPL7           <---------ALFIN1
------ANAC58       <-------PIF5              --------->ZAT14
------ANAC58       ------->PIF5              <---------ABI4(2)
-->MYC3            ------->MYC3              <---------ZAT14
---MYC3            <-------MYC2           <---------At4g35610
--->O2             ------->MYC2           <---------ZAT2                    <---------WRKY12
----O2             <-------MYC3           ----------->RAV1(2) ------->GAMYB--------->WRKY18(1)
--->TGA1a         <---------ANAC58        --------->At4g35610--------->MYB46(3)
----TGA1a         <---------ANAC58        --------->ZAT2   <---------DOF5.7(2)              --------
--->ANAC58      <---------ANAC46      --------->ANAC58   --------->DOF5.7(2)<---------WRKY38(1)
--->ANAC58      <---------ANAC58      --------->ANAC58  --------->TOE2(3) <-----------HVH21<--------
--ALFIN1--------->ANAC46--------->LBD16  ------->TEIL   --------->TOE1(3)----------->GT1   <--------
>ATERF1(1)      <---------ANAC58      --------->ANAC46------->TEIL --------->ICU4    <---------TOE1(1)
 
cgtgcctttctccaccatggctcgtgccgcgtgtttgataaacgcagctgcaccgcgaacgttaacagccattatgcggtcaaaccgttcgaggtcaaag  19354900
      <----------DOF2                                     --------->LBD16           <---------ANAC58
    --------->HSFC1(2)                                   <---------ANAC46           <---------ANAC58
    --------->HSFB2a(1)                                  <---------ANAC58--------->ZAT14
    <---------HSFB2a(1)        <-------GAMYB             <---------ANAC55(1)      <xxxxxxxxxxxxxxxxsmallRNA(s)
    <---------HSFC1(2)      ------>NtERF2                <---------ANAC58<---------ZAT18
 <------ZmHOX2a(1)          --------->LBD16              --------->ANAC55(2)   --------->MYB52(1)
-->DOF2                   <---------LBD16            <----------DOF2     <---------ZAT14         <--
-WRKY38(1)    <---------MYB46(3)<<<<<<<<<MYB2       <---------ANAC58   --------->At5g28300       <--
-WRKY12      --------->ALFIN1 <---------DEAR3(1)    <---------ANAC58 <---------DEAR3(1)  ------>ZmHOX2a(1)
 
tcgaggaagctttccagtggttccaagactccggcgttgctaaacagaacgtctagctttccgtgtttttcgacggtgaacttaactgcgtcctcgactt  19355000
                                                                                                   -
                                                                                                <---
                                                                                             <------
                                                                                      <---------WRKY12
                                                                                     --------->DOF5.7(2)
                                                                                    --------->TOE2(3)
                     --------->At5g28300       <------ZmHOX2a(2)                   --------->ANAC58<
                    ----------->GT1         --------->LBD16                        --------->ANAC46-
           <---------O2                    <---------HSFB2a(2)                     --------->ANAC58-
           --------->O2                    --------->HSFB2a(2)                    --------->SPL7----
       <-----------HVH21               <----------DOF2  ----------->HVH21         ------->TEIL -----
-------ANAC58       ------->GAMYB<----------DOF2--------->YAB1                <---------------AtSPL3
-------ANAC58    --------->MYB52(1)  ---------->ID1  --------->TOE1(2)  <---------ARR11(3)--------->YAB1
 
ccgtctcatttgtcacatcgcaacggtaaaaactagctttgtctttcccgatcaaaactgcgacgttttggcctagttcttcttgtacgtcaactataac  19355100
                                    <------NtERF2
                                    --------->At4g35610
                                    --------->ATERF1(1)
                                    <---------At4g35610
                                   <---------RAP2.3(1)           <---------ICU4
                                   ------>NtERF2                 --------->YAB1
                                   <---------ATERF1(1)          --------->ICU4
                                   <---------DEAR3(2)         --------->YAB1
                                 <------NtERF2           ----------->RAV1(2)
                                <-----------HVH21       --------->LBD16
               --------->LBD16  <---------SPL7          ------>NtERF2
       <---------ANAC46        <---------O2            --------->DEAR3(1)
       <---------ANAC58        <---------DEAR3(1)      <---------ALFIN1
       <---------ANAC58        --------->O2           --------->ATERF1(1)
   <---------At4g35610         --------->DEAR3(1)     <------NtERF2
   <---------ZAT2              <---------ANAC46       --------->DEAR4(2)
   --------->At4g35610       <---------RAP2.3(1)     <---------RAP2.3(1)
   --------->ZAT2   --------->MYB46(3)------>NtERF2  <---------ATERF1(1)
-------->AtMYB61 <---------ZAT14------>NtERF2  <---------At4g35610
------ALFIN1  <---------ANAC46<------NtERF2    ----------->RAV1(2)            <---------ANAC58
-----GT1--------->LBD16   --------->MYB52(1)   --------->At4g35610  <-----------GT1
---------DAG2 <---------ANAC58--------->ATERF1(1) <---------ATERF1(1)     ------>ZmHOX2a(2)
-------->TOE2(3) --------->ZAT14<---------ATERF1(1)--------->ATERF1(1)   <------ZmHOX2a(2)
-------->TOE1(3) --------->REM1(2)<---------DEAR3(1)--------->ARR14(2)  <---------ARR11(3)
--->GAMYB     <---------ANAC55(2)--------->ATERF1(1)<---------ARR14(2)  --------->ARR11(3)   <------
---->MYB46(3) <---------ANAC58--------->RAP2.3(1) ------>NtERF2 <---------YAB1<---------ANAC58
 
caccttagctccgtggtccgtgaacagcctagcggcgtcggctccaatcccgctggctccgcctgttataattacgatcttgccttccaatctactgcat  19355200
       <---------ICU4
       --------->ATHB51
       --------->ATHB12
       -------->ATHB1
       <---------AHL20(2)
       -------->HAHB4
      <---------ATHB51
      --------->ICU4
      <---------YAB1
   --------->AHL20(2)                                                     ----------->RAV1(2)
 --------->ANAC58                                                         <---------ANAC58
 --------->ANAC55(2)                                                      <---------ANAC58
 --------->ANAC58                                                         <---------ANAC46
 --------->ANAC55(1)                                              --------->ANAC58            ------
 ----------->GT1                         --------->AtLEC2         --------->ANAC58  ------>NtERF2---
 <---------ANAC55(2)                  <-------TEIL               --------->DAG2    ----------->HVH21
---AtLEC2    <---------At4g35610     --------->CCA1(2)          ---------->DOF2    <---------ETT(1)
 
ggacaagtaattattgaactgatcaacatttgtatgtaagatacatgcacaattgtttatagagagataaagcaattgcctgagtcccgacattgatgtg  19355300
                                                                                                 ---
                                                    <---------AHL20(2)                           <--
                                                    --------->AHL20(2)                          <---
                                              --------->ANAC46                                  <---
                                              --------->ANAC55(1)                      <----------DOF2
                                           <---------ZAT14                            <---------ANAC58
                                           <---------ZAT18                            <---------ANAC58
                                         --------->ZAT14                              <---------ANAC46
                                       <---------------AtSPL8                     <------------CBF
                                   <---------ARR14(2)                           <---------AHL20(2)
       *TSS                        --------->ARR14(2)   <-----------GT1         --------->AHL20(2)
 --------->DAG2           <---------ETT(2) --------->ZAT18                      --------->AHL20(1)
--->ALFIN1                --------->ETT(2) --------->ZAT14                      <---------AHL20(1)<-
------>ETT(2)      --------->AHL20(2)  --------------->AtSPL8             <-----------GT1 <---------
 
tcgaaaggtatacaaactgagataaaatgtcgactgagtatatgtgtacacttaatttataacccaagagttgcatttcacattttattgcttttaccac  19355400
      ------->MYC3
   <---------ALFIN1
--------->ANAC46
------>ZAT14             ---------->ID1
-------ZAT14           ------>ZmHOX2a(1)                                                  --------->AHL20(2)
-------DOF2<---------ANAC58 <----------DOF2                                  --------->CCA1(2)
------DAG2 <---------ANAC58 ------>ZmHOX2a(1)                    <---------ALFIN1     <---------TOE2(3)
----------GT1       <-----------GT1        <---------AtMYB61  --------->MYB46(3)      <---------YAB1
--GT1 <-------MYC3 <-----------GT1   <---------YAB1         -------->P    <---------TOE2(3)        -
 
tttactccacgttttcttgatttttcctgtcctttttattcttcttgtggtctagctataacttacccacacattttgagatttgaactaagattaaaca  19355500
                                  <---------At4g35610
                                  --------->At4g35610
                                  --------->LBD16
                           --------->AHL20(2)
                        --------->YAB1
                        <--------ATHB1
                        <---------ICU4
                        <--------HAHB4
                        --------->ATHB51               ------>ZmHOX2a(1)
             ---------->DOF2<-----------GT1       <---------GLK1(1)
        <-------MYC3   <---------ATHB12   --------->ANAC58
        ------->MYC3   --------->AHL20(2) --------->ANAC58   ------->GAMYB
  ----------->HVH21    <---------ATHB51--------->MYB46(3) --------->YAB1                  <---------ANAC55(2)
-------->ALFIN1        --------->ICU4 -------->P  --------->GLK1(1)     <-----------GT1   --------->ANAC55(2)
 
cggtgttgacatgtgtaaaagaaacaataattaactccgctaaccacgaattgatatcctataacagtctaaatttaaccagtgtttgtgtttaagtaac  19355600
                                    ------->GAMYB
                                   --------->MYB46(3)
                                  --------->ANAC58
                                  --------->ANAC58
                                  ------>MYB83
                                  -------->P                                                     <--
                         <----------DOF2--------->AHL20(2)                                 <--------
                        --------->TOE2(3)    --------->ARR11(3)                         <---------AHL20(1)
                        --------->TOE1(3)   --------->RVE1(1)                           --------->AHL20(2)
               <------ZmHOX2a(1) ------>MYB46(1)            <-----------GT1             --------->AHL20(1)
      ----------------->AGL1  --------->ANAC46      <---------ARR11(1)                 <---------AHL20(2)
      ----------------->AG  <-----------GT1 --------->CCA1(1)                         --------->ICU4
   <---------GLK1(1)  -------->P ------>MYB83<---------ARR11(3)    <-----------GT1 --------->AHL20(2)
   --------->GLK1(1)  ------->TEIL------>MYB46(1)  <---------CCA1(2)             ----------->GT1<---
 
aaattgatatccacatgaggacatcaacctttaacccaaccaaaaaaatatcccaaatctatatttctatttgctactcatgtgaagtaaatattttatg  19355700
                          --------->YAB1             --------->AHL20(2)
   <-------TEIL      --------->AHL20(2)             <---------AHL20(2) <XXXXXXXXXXXXXXXXXXXXMIR865-3P
-------LBD16         <---------AHL20(2)             --------->AHL20(2)<---------At4g35610
-AHL20(2)         <----------DOF2          ---------->DOF2     <---------AHL20(2)        -----------
------AtLEC2 --------->YAB1          <---------At4g35610     --------->CCA1(2) ----------->GT1     <
 
cctggattcatttccatcatacttttaattcatagttttgagttgataaagacatataaattagatataatttagatgagtttgggaaaaaatagtaagt  19355800
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AGI:  At2g47120.1   
Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT2G47130.1); similar to 3-beta hydroxysteroid dehydrogenase [Digitalis parviflora] (GB:AAV68713.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040)
Range:  from: 19354429    to: 19355308    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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