Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                   <-                                                                                                  <--                                                                                                 <---                                                                            <----------DOF2     <----                                                                        <----------DOF2         -----        <---------MYB59                                              <---------ALFIN1        <-------       ----------------->AGL1                                      ----------->RAV1(1)     --------->ARR14(2)     <---------WRKY18(1)            <------ZmHOX2a(1)             --------->DEAR3(1)       <---------ARR14(2)    --------->WRKY12        --------->ARR11(3)                    --------->DEAR4(1)      <----------    --------->WRKY38(1)     <---------ARR11(3)                    <---------ETT(1)       <---------MYB46(3) -------->DAG2        ----------->GT1    ---------->DOF2          --------->DREB2C(2) --------->MYB52(1) ------->DOF2--------->YAB1<---------CCA1(2)                      --------->At1g77200 ------------>AtMYB77 >AGL1 <-----------------AGL1  <----------DOF2 ---------->DOF2--------->MYB46(3)    <---------MYB52(2)   gaaaggttgacccaattagaaaacttgttatatctttaggagtcaaagtcaaagcgcgtttacaaacaccgacactttctttgtcaactagcggttaccg  19343400                                                          <---------------AGL15                                                          --------------->AGL15                                                         ----------------->AGL3                                                         <-----------------AGL2                                                         <-----------------AGL1                                                         <-----------------AGL3                             <---------ANAC58      <---------ALFIN1              --------->ANAC55(1)                 ------>MYB46(1)    --------->ZAT18  <<<<<<<<<TAC1                -------->P    <---------ZAT18--------->ZAT6                 ------>MYB83 <---------MYB46(3)<---------ALFIN1              ----------->RAV1(1) --------P    --------->ANAC58                  --------->AtMYB61 ------GAMYB  --------->ANAC58                  ------->GAMYB -------MYB46(3)   <---------HSFB2a(1)         <---------MYB52(2)          ----------->RAV1(1) ------DEAR3(1)   --------->ZAT14              --------->MYB46(3)    --------->REM1(1) -----LBD16   --------->ANAC46                 <---------MYB55(2)   <-------TEIL ---->LBD16   <---------ANAC55(2)             --------->ANAC58   ----------->GT1                    < --At5g28300  --------->ANAC55(2)         --------->RAP2.6(2)   <---------------AtSPL8 --------->YAB1 -HVH21      <---------LBD16 <---------ANAC58 --------->ANAC58  --------------->AtSPL8 --------->AHL20(2)   cggttgttcactaggcacggaacactcgatttcttcccaagaagtcgcaaccaacacttactatgtatggtacatcacaacatagacaataaaaactctt  19343500               ----------->GT1             <-----------RAV1(2)        --------->ANAC46       --------->LBD16       <---------HSFB2a(2)       --------->HSFB2a(2)      <---------ANAC46     <---------LBD16  --------->KAN4(2)                                 <--------P <---------HSFC1(2)                               <---------ANAC46      <---------------AGL15 --------->HSFC1(2)                             <---------ANAC46        <-----------HVH21 <---------KAN4(1)                           <-----------RAV1(1) --------->ZAT18 --------->KAN4(1)               <---------YAB1--------->ALFIN1  <-------TEIL  ----------->GT1    --- <---------HSFB2a(1) --------->ATHB12      <---------GLK1(1)     <---------ZAT14      ----------->GT1 --------->HSFB2a(1)--------->ICU4   --------->ALFIN1        <---------------AtSPL8   <----------ID1 ---------KAN4(2)   <---------YAB1--------->ATHB12----------->GT1--------->ZAT14    ---------->DOF2<-   ggaatgttccgcgaaacaggtgattattgactaccatgagtggggaaatgtggggtaagttaacaagtacactgcttcacatgggaaaaagaaaaatgag  19343600                                                       --------->AHL20(2)                                                       <---------AHL20(2)        <---------ALFIN1                                                  --------->AHL20(1)          --------->ANAC46                                                 --------->AHL20(2)           <---------ALFIN1                      <---------ICU4             --------->YAB1              --------->MYB46(3)                     --------->ICU4            --------->AHL20(2)          --------->PCF2                  <---------AHL20(2)        --------->AHL20(2)            <---------PCF2                  --------->AHL20(2)   <---------AHL20(2)                 --------->PCF5                 --------->AHL20(2)    --------->AHL20(2)                 --------->TCP16(1)     ----         <-----------GT1    --------->TOE2(3) --------->YAB1           --------->ALFIN1          ----  --------->ANAC46<---------YAB1      <---------AHL20(1)        --------->REM1(2)--------->AtMYB61  - ------>CCA1(2)  --------->AHL20(1)   --------->AHL20(2)        <---------ZAT14 --------->MYB46(3)--- ------TEIL      <---------AHL20(1)   <---------AHL20(2)        --------->ZAT14------>NtERF2  <------   atacacataattcacaaaatataatttttatcttagacaatttttttaaaataatattaaaatcagtgtagaagtggtccccaccactattttgtttttc  19343700             <---------AHL20(1)             <---------AHL20(2)           <---------YAB1         -------->ATHB1         <---------ICU4         <--------HAHB4         --------->YAB1         --------->ATHB51         -------->HAHB4        <---------ATHB51        <---------YAB1        --------->ICU4     --------->AHL20(2)     --------->AHL20(1)           <------------CBF     <---------AHL20(2)         <---------AHL20(2)    --------->AHL20(2)         <---------AHL20(1) ----->TOE1(3)                 --------->AHL20(1) ----->TOE2(3)<---------YAB1   --------->AHL20(2)             ------>ZmHOX2a(1)         ------->TEIL -------->AHL20(2)  <---------ANAC58                         <---------MYB59      <---------MYB52(1) --->ZmHOX2a(1)     <---------ANAC58            <-----------GT1     <----------DOF2    <---------CCA1(2) -----GT1<---------AHL20(2)    <---------AHL20(2) <-----------GT1*TSS     <----------DOF2   cttaaaattaattattatttttgctggactaaataaaattggtttttttttttctctctctgtcctaactctttttctttctctgttttgtatctctctc  19343800                                                                                       <---------ARR14(2)                                                                              --------->MYB46(3)                                                                              <---------MYB52(2)                                                                            ----------->RAV1(1)                                                                         --------->ANAC58                                                                         --------->bZIP60(1)                                                                         --------->ANAC46 --------->YAB1                                                                         <---------bZIP60(1)                                        --------->YAB1                   --------->ANAC55(1)                               --------------->AtSPL8                    <---------ANAC55(2)             ---------->ID1<----------DOF2                               --------->ANAC58<-------TEIL         <----------DOF2  --------->TOE2(3)        <---------YAB1        --------->ANAC55(2)       <---------DAG2     --------->TOE1(3)   <---------ICU4         <-----------HVH21 --------->ARR14(2)   tctctctcactctttgtctctcccctaacctttattgtactagcataaccattaccatacatactcttctctatcacgccacaaacgcagattcatcaca  19343900                                                                 <---------ICU4                                                               <---------ANAC55(2)                                                               --------->ANAC55(2)                                 <---------ZAT18            <--------P                           --------->ATHB12                <-------GAMYB                <---------ZAT6                          <---------YAB1                --------->LBD16           --------->ATHB12 --                 --------->At4g35610                  <---------LBD16            --------->ICU4 -----                 --------->GLK1(1)        ---------->DOF2 ----------->GT1 <----------DOF2     -------   tcttcttcttgttcatagcatctccatcactattgggctctcttcaaaggtgtatttctggggttacttattccttctttgtattgattagtgttgaaaa  19344000                                                    --------->LBD16                                --          <---------ANAC58                         --------->HSFB2a(2)                            <--       <---------MYB52(1)                          <---------HSFB2a(2)                           ----      <-------GAMYB                 --------->AHL20(1)                                      <--------     <-----------RAV1(1)            --------->AHL20(2)                                  <---------ANAC58 ------->ALFIN1          <----------DOF2       --------->GLK1(1)                        <---------ANAC58 ---->DAG2<---------ANAC58          <---------AHL20(1)                       --------->At4g35610 <--- --->DOF2 <---------ANAC46          <---------ARR11(3)                       <---------At4g35610 ----   ggtgtctctgttgcgttcaagagctagctttagggctatatattaagaggtttccagaggttttttttggattataggcatctgtgtttggcttacatgg  19344100                                                                                --------->WOX13(1)                                                                              <------ZmHOX2a(2)                                                                             <---------ARR11(3)                                                                         ---------->DOF2 <----------DOF2                                                     ------>ZmHOX2a(2) ------>ZmHOX2a(1)                                                 <---------ARR14(2) ---->ZmHOX2a(2)                                                   <---------AGP1 ----ZmHOX2a(2)                       <------ZmHOX2a(1)            --------->ARR14(2)      <---------MYB46(3) --->TEIL<---------TOE1(3)          --------->MYB59                <---------ARR11(3)    <-------GAMYB -AtLEC2 <---------TOE2(3)      --------->ATHB12                   --------->ARR11(3)   <---------MYB46(3) ------ARR14(2)                <---------AHL20(2)       <---------AHL20(2)   --------->ARR11(3) ----->ARR14(2)               <---------WOX13(1)   <------------------------ANAC81  --------->MYB59   atcctttttttaaggttttctgggcaagactaattgattaggaccaaagtttgtgtttttatttgtttggatctacaaagatcaattaggctgttgttga  19344200                                                                                              <------                                                                    ---------->DOF2           -------                                                                <------MYB46(1)         xxxxxxxxxxxxx                                                                <------MYB83      --------->ALFIN1                                                               <---------TOE2(2)<---------ANAC58                                       <---------ATERF1(1)   --------->LBD16    <---------ANAC46                                      <---------DEAR3(1)    <---------ANAC46    <---------ANAC58<----                                   <------NtERF2           <-------TEIL       <---------ZAT14<-------                                 --------->ALFIN1        --------->TCP20     --------->ALFIN1--------    ------>ZmHOX2a(2)      <---------REM1(1)             <---------PCF2    --------->ALFIN1 <--------   attggatcgagtgatggaagctagaattgatgaaggtggggaggctcaacaattctatgggtccgtaggtaaaagaagtgtggagtgggatttgaatgat  19344300  Previous    Next  AGI:  At2g47070.1    Description:  SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1); DNA binding / transcription factor. Identical to Squamosa promoter-binding-like protein 1 (SPL1) [Arabidopsis Thaliana] (GB:Q9SMX9;GB:O80717;GB:O80718;GB:O82651;GB:Q0WLD6); similar to SPL12 (SQUAMOSA PROMOTER-BINDING PROTEIN-LIKE 12), transcription factor [Arabidopsis thaliana] (TAIR:AT3G60030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40192.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70922.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70646.1); contains InterPro domain Transcription factor, SBP-box; (InterPro:IPR004333); contains InterPro do Range:  from: 19343765    to: 19347939    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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