Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->bZIP60(2)                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                        --------->ANAC46                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                  ---------->DOF2                                                            --------->ANAC58                                                            --------->ANAC58                                    --------->ALFIN1    --------->MYB46(3)           <----------DOF2                       <---------AHL20(2)               <---------MYB52(2)   --------->ANAC58                    --------->TOE2(3)    --------->ANAC58   ------->GAMYB    <---------YAB1         --------->At4g35610    <---------GLK1(1)     <---------HSFB2a(2)<-----------HVH21--------->AtLEC2     <-----------HVH21--------->AHL20(2) --------->ANAC58   --------->ANAC46 --------->ANAC58   gtatcgaggtcatatgaaaacacattaattttggaaatgtgggaagtaatgtagttccacaaacgcctcaatgcgcgtcacgataacctttcatgcattg  19314500                                      --------->ZAT6                                     <--------P                                      <-----------GT1                        --------->AHL20(2)                                    --------->YAB1                           <---------AHL20(2)                                 <----------DOF2                         <---------AHL20(2)                                 --------->TOE2(3)                      <---------AHL20(1)                                 --------->TOE1(3)                      --------->ARR11(3)   --------                              <---------AHL20(2)             --------->At4g35610 <---------AHL20(2) <                           --------->YAB1          --------->YAB1       <---------ARR11(3)   <-------             ----------->GT1  <-----------GT1   <---------CCA1(2)     ------->TEIL      <-------GAMYB   aacacgattaagaagatgtaatttctcaatattaactttaatactacttcatatcatcaaaacagctaaatgtatatatttattttttggggttagatat  19314600                                                                     ------->MYC3                                                                     ------->MYC2                                                                     <-------MYC2                                                                     <-------MYC4                                             =================================bZIP_DOF                                          <---------ALFIN1           <-------MYC3                                         -------->P                  ------->MYC4                                         ------>MYB83               --------->ANAC55(2)                                         =====================================MYC_MYB                                 <---------ICU4                     <---------O2                               <---------ARR11(3)                   <---------TGA1a                           --------->ANAC46  <----------DOF2        --------->O2                         ----------->RAV1(1) --------------------->WRI1                       --------->DEAR3(2)------>MYB46(1)            <--------ABF1   <---------ZAT14                      ------->TEIL      ----------->RAV1(1)         <---------ANAC55(2)  --------->TOE1(3)   --------->PCF2   =======================================MYC_MYB--------->REM1(1)  --------->TOE2(3)  ------>MYB46(1)   ------->GAMYB   <---------ATHB12          <---------At4g35610 ->ARR11(3)          ------>MYB83--------->YAB1    ------>ZmHOX2a(2)--------->TGA1a --------->ZAT14 ---------ATHB12   <---------MYB59     --------->AtMYB61       ----------->HVH21 --------->At4g35610 --ARR11(3)     <---------ARR14(2)    --------->MYB46(3)--------->YAB1     <---------AtMYB61        <   caaacattaactagcgagaaaccgaacccacaaaatcataaccaacactttgatcgaatcatcgtttgacacgtgttttggtctgctacactaacaacat  19314700                 <---------ATHB12           <-----------HVH21        <---------At4g35610        --------->At4g35610      --------->SPL7                         <---------ZAT18     ------>NtERF2                        <---------ANAC46                                     ------    ----------->HVH21               <---------AHL20(2)                                     <---------AHL20(2)    <---------ZAT18         <---------MYB52(1)                                             --------->AHL20(1)    <---------SPL7<---------ICU4<---------DAG2                                             --------->AHL20(2)  <---------At4g35610      <-----------HVH21 <---------ZAT14                          --------->AHL20(2)  --------->At4g35610     --------->DEAR3(1) --------->ZAT18                         <---------AHL20(2) -----------GT1  <---------YAB1 <----------DOF2  <----------DOF2                    --------->AHL20(2)   ttttagcggacgctgtctcatcattccaccgtcgctttttatttgtgtgaactttgaacaaaaatacgaattaagaccatatcaaatttaaaataaaata  19314800                                                       --------->ATERF1(1)                                                       <---------At4g35610                                                       <------NtERF2                                                       --------->At4g35610                                                      <<<<<<<<<AtERF-1                                                      <<<<<<<<<AtERF-5                                                      <---------ATERF1(1)                                                      <<<<<<<<<AtERF-2                                                      <---------DEAR3(2)                                                      <---------ERF1                                                      <---------RAP2.3(1)                                                      ------>NtERF2                                                      <<<<<<<<<AtERF-7                                                      <<<<<<<<<AtERF-4                                                      <<<<<<<<<AtERF-3                                                      <---------RRTF1(1)                                                     <---------RAP2.6(2)                                                     <---------RAP2.3(3)                                                     <---------RRTF1(2)                                                     <---------ANAC58                                                     <---------RAP2.3(2)                  <---------YAB1                                                     <---------DREB2C(2)                  -----------                                                     <---------RRTF1(3)                 --------->YAB1                                                     <---------ANAC58                  <---------YAB1                                                     <---------ATERF1(2)             -------->ATHB1                                                --------->YAB1                       --------->YAB1                                               <---------ATHB12                     <---------AHL20(2)                                              ------>MYB83                          --------->AHL20(2)                                              --------->ANAC58                      <---------YAB1                                              ------>MYB46(1)                       --------->ICU4                                         --------->ANAC46                           --------->AHL20(1)                                      <-------TEIL   <---------ANAC46         --------->TOE2(3)         <---------TOE1(2)         --------->ANAC58  <---------DEAR3(1)       --------->TOE1(3)  <---        ------>ZmHOX2a(1)<---------AHL20(2)   --------->ANAC58                <---------MYB59-------- --->AHL20(2) <-----------GT1      --------->ANAC58 --------->RAP2.6(3)---------->ID1<---------ICU4   aaaacaagtcctagttttatcttctatataaacacacacgtacaaaccaagcatggcggctcattactcatttgtcttaacctaaaattattataaaaag  19314900                         --------->CCA1(2)                        <---------ARR14(2)                                                  <--------                        <---------ARR11(3)                                               <---------ANAC58                        --------->ARR14(2)                                       --------->ANAC58 >TBP                   --------->ARR11(3)                                       -------->P --------- ---ZmHOX2a(1)          --------->ARR11(1)                                       --------->ANAC58<--- -->DOF2                *TSS                <-------TEIL             --------->At4g35610 <---------ANAC58   gatagagagagagagagagagctagagatatgggaagagggagaagttcatcgtcttcttcaatagagagtagcagcaagagcaacccattcggtgcttc  19315000                        ----------->RAV1(2)                       ------->TEIL                       <---------ARR14(2)                     --------->DEAR3(1)                    --------->ANAC46                    --------->ANAC58                    --------->ANAC58                --------->ANAC58             --------->TOE1(2)                    --------->GLK1(1)             --------->TOE2(3)                --------->HSFB2a(2)       --------->ANAC46--------->ARR14(2)     <---------HSFB2a(2)      --------->HSFB2a(2)                --------->ZAT2                         <------NtERF2       <      <---------HSFB2a(2)--------->TOE1(2)  <---------LBD16                    ------>NtERF2        < -MYB46(3)   --------->TOE2(2)           <---------ZAT2------>ZmHOX2a(1)       <---------MYB46(3)   - >ABI4(2)    --------->TOE1(3)           <---------At4g35610                  <---------DEAR3(1)    - --------HVH21  --------->ANAC58         --------->At4g35610                ------->GAMYB     <------   gtcaagtactcgaaacctaagcacggacctgagactcggactcagcttcgggacatcctcagggactcaatatttcaacggtggctatgggtactccgtt  19315100                                          <------ZmHOX2a(1)                                 --------->At4g35610                                 <------NtERF2                                 <---------At4g35610                                 <---------ZAT2                                 --------->ATERF1(1)                                <---------ERF1                                <---------MYB46(3)                                ------>NtERF2                               <---------DEAR3(1)                               <---------ANAC58                               <---------RRTF1(2)                               <---------ANAC46                --------->ARR14(2)   --------->ALFIN1         <------NtERF2         <---------ANAC58         <-------GAMYB         <---------RAP2.3(3)        <---------MYB46(3)     <---------RAP2.6(2)        <---------DEAR3(2)     <---------RAP2.3(2)                                 <---------ANAC55(1)     --------->LBD16           --------->ATERF1(2)                                 --------->ANAC55(2)     ------>NtERF2             <---------ATERF1(2)                                 <---------ANAC46    <---------DEAR3(1)        --------->RAP2.6(3)                                  <---------ANAC58   <---------LBD16<---------LBD16<-------GAMYB                                     <---------ANAC58 --------->ARR14(2)           --------->ATERF1(1)                                  <---------ANAC55(2) <---------ARR14(2)         --------->ALFIN1                                  <----------DOF2 ---------At4g35610 --------->LBD16<---------MYB46(3)                <---------ZAT14 ---------ZAT2  <---------ARR14(2)<---------DEAR3(1)                 --------->ZAT14 -------->ZAT2 <------ZmHOX2a(1)<---------RAP2.3(1)         <---------ZAT6  <---------At4g35610 -------->At4g35610--------->ANAC55(2) <XXXXXXXXXXXXXXXXXXXXMIR838   --------->REM1(2) ---------->DOF2 -GAMYB<---------DEAR3(1) <-----------RAV1(1)<------ZmHOX2a(1)      --------->ALFIN1 ----------->HVH21   gcagctccggcggtagaggatgcggaatatgtggcggctgtggaggaggaagaagagaatgagtgtaacagtgtagggagcttttacgtgaaagtgaaca  19315200                                     --------------->AGL15                                     <---------------AGL15                                    <-----------------AGL2                              ------->TEIL                   ---------->DOF2  <-----------------AGL3                           --------->ANAC46     --------->GLK1(1)  <------ZmHOX2a(2)                                            --------->ANAC58     <---------GLK1(1) <---------ARR11(3)            ------>NtERF2                   --------->ANAC58   ============================HOX2a_HOX2a         --------->LBD16                <---------WRKY12  <   <------ZmHOX2a(1)   --------->ARR11(3)       -------->P   --------->YAB1       <---------WRKY38(1)   tggaaggagttccaattggaagaaagatcgatctaatgtctcttaatggctaccgcgacttgatcagaacccttgatttcatgttcaacgcatccattct  19315300                                                                                 <----------DOF2                                                                              <-----------GT1                             --------->YAB1                                <---------AHL20(2)                      <-----------HVH21                                <---------RVE1(1)                --------->YAB1         <---------AHL20(2)              <---------CCA1(1)                --------->ANAC55(2)    --------->AHL20(2)             --------->ARR11(3)                --------->ANAC46   --------->ATHB12                   <---------ARR11(3)           <- ---------MYB52(1) <---------ICU4 --------->ICU4   <---------ZAT6  <---------TOE2(3)            <----   ctgtaagtttctatgtatacataatgtcatatcagaatgatttatatgtcttagaggtagcaaatttctaacgatatttttttctttcttataagtccgt  19315400  Previous    Next  AGI:  At2g46990.1    Description:  IAA20 (indoleacetic acid-induced protein 20); transcription factor. Identical to Auxin-responsive protein IAA20 (IAA20) [Arabidopsis Thaliana] (GB:O24410); similar to IAA30 (indoleacetic acid-induced protein 30), transcription factor [Arabidopsis thaliana] (TAIR:AT3G62100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40221.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 19314924    to: 19316059    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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