Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->MYB46(3)     --------->MYB52(1) --------->ZAT6                                  <---------MYB52(2)                     <---------AHL20(2) --------->RAV1(1)                              <---------At4g35610                    --------->AHL20(2) -------WRKY38(1)                               --------->At4g35610        --------------->AGL15 -->DAG2                    <----------DOF2  --------->ZAT14           <----------DOF2 --------->ICU4 -->DOF2------->GAMYB  ---------->DOF2   --------->ARR14(2)    --------->DAG2 <---------ICU4  <------ZmHOX2a(1) ---AGL15        ----------->GT1      --------->AtMYB61       ---------->DOF2 <--------HAHB4 <-------   tcaacagtaacgaccaagactgaaaaaaagctttgtgaaaccaaaactgcagcaaacccataaaaaaagtttactttcgataattagcatttattaggac  19267600                        <--------HAHB4                        <---------ICU4           <------ZmHOX2a(2)                        --------->ATHB12         --------->CCA1(2)                       <---------ATHB12         --------->AGP1                     --------->WOX13(1)         --------->ARR14(2)                         --------->bZIP60(2)                     --------->YAB1             <---------ARR11(3)                         --------->ANAC46                   <---------YAB1               --------->ARR11(3)                         --------->ANAC58                --------->ICU4        <---------TOE2(3)                                    --------->ANAC58           <---------ANAC55(2)        <---------TOE1(3)                    <---------GLK1(1)           --------->ANAC55(2) <---------YAB1   <---------ARR14(2)         --------->GLK1(1)          <---------------AtSPL8     ---------->DOF2                      <---------ARR11(3)    -----  <---------MYB46(3) <-----------GT1<---------AHL20(2)                ---------->DOF2   --------->ZAT18 ---ID1   --------------->AtSPL8--------->AHL20(2)        ---------->DOF2 --------->ARR11(3)---------   gagattgttgattaagtacttattaatcatttgattatttaaagtttcaagatccaaattcaaagaaaaaacaaaagatttctccctaagcccacgacat  19267700                                 --------->YAB1                              --------->WOX13(1)                          --------->YAB1                          ------->GAMYB                         <---------MYB55(2)                         <---------ATHB12                                       <---------YAB1                         --------->MYB46(3)    <-----------GT1                <---------AHL20(2)                        ------>MYB83       --------->AHL20(2)                <---------AHL20(2)                  <---------ARR14(2)       <---------AHL20(2)         <---------YAB1  <---------At4g35610   ------>MYB46(1)  --------->TOE2(3)         <---------YAB1  --------->At4g35610   -------->P       <----------DOF2        <---------ARR14(2)  --------->ZAT2  --------->ARR14(2)     --------->TOE1(3)      --------->ARR14(2)              ----- ---->ICU4       <---------CCA1(2) --------->At4g35610          --------->GLK1(2)               ----- -->RAV1(1)   ------>ZmHOX2a(1) <---------ATHB12      <---------MYB46(3) <---------YAB1     ------>ZmHOX2a(2)   tatcagctctcttctcctcatatcccaaccatcaatcatctaactttaatttctattcgttggacaaatctgattattttttatttttgttcgatctcaa  19267800                                                   --------->ANAC55(2)                                                --------->ICU4                                              --------->YAB1                                              <---------ICU4                                             --------->ICU4                                            <---------AHL20(2)                                            <---------AHL20(1)                                    ---------->DOF2<---------ANAC55(2)                                   --------->AHL20(2)                                               -                               --------->AHL20(2)  <---------YAB1                              ------                   --------->YAB1  <---------AHL20(2)   ----------->GT1                    ----------         <------NtERF2    ----------->GT1   --------->AHL20(1)      >>>>>>>>>>GT-3b       <---------ZAT6    <---------TOE2(3)   <---------LBD16     --------->AHL20(2) ---------->DOF2       <------ZmHOX2a(1) ---->ANAC58       --------->AHL20(2)      --------->YAB1<------ZmHOX2a(1)           --------->YAB1<- ---->ANAC58  <---------ATHB12 --------->ICU4<---------YAB1   --------->AHL20(2) --------->TOE1(2)<--   gcattttaggtggcaaatgaataatatggggaaatatttaaagaattataattatgtaaggaaataaaagaaaaataagagaaactaggatagtggtaaa  19267900                                                                                  <-------TEIL                                                                             --------->YAB1        <-----------HVH21                                          --------->ARR14(2)      --------->MYB59                                              <---------ARR14(2) ----------->CBF                        --------->PCF2             <-----------ARR10 ---->DOF2                             --------->TCP15(1)          <---------ARR11(1) ->GT1<---------TOE2(3)       <---------AHL20(2) <------------CBF  --------->ARR11(3) -----ZmHOX2a(1) --------->At4g35610   <---------PCF2              <---------ARR11(3)              <- --------ID1<---------ANAC55(2)   --------->ATHB12                <---------CCA1(2)    *TSS       ---   aggacaataaggtcacatgaactgaaccagatttattcatgggtccctctaaattggttctcttgcccatatctctccatcatattcattctcatcacaa  19268000                                                              <----------DOF2                                                              <---------DAG2              --------->GLK1(1)                    <---------ARR11(3)         <---------ZAT2                            --------->GLK1(2)         --------->At4g35610                       --------->ARR11(3)         <---------At4g35610                      --------->CCA1(1)   <-----------GT1                                --------->RVE1(1)  <---------YAB1                             <---------HSFB2a(2)                          <---------AHL20(2) --------YAB1 <---------GLK1(1)              --------->HSFB2a(2)                          --------->AHL20(2) ------>TOE2(3)  <-----------GT1        <<<<<<<<<TBF1<---------ICU4            <----------DOF2  -----   cattataactctgctgatttctctcttcttgttttctcattcttcttctaaaaaatcttgacaactttttgtttttgttttctttctctgaattttttaa  19268100                                        --------->CCA1(2)              <---------ZAT14    <----------DOF2                                       --------->ARR11(3)         <---------YAB1        ------>MYB46(1)                                  --------->CCA1(2)            <---------YAB1           ------>MYB83                                 <---------ARR11(3)            --------->ICU4--------->MYB59  ------- ----->DOF2   ------->TEIL       --------->ARR11(3)    ---------->DOF2 --------->ZAT14 <---------ALFIN1   aagagagagagctatgtagctatgaaacagtaagagatatagatatagagagacagagaaagatgatgatcagtgaagttaggctaaacccactttctat  19268200                   <---------bZIP60(1)                   --------->bZIP60(1)                 --------->YAB1              --------->WOX13(1)            --------->WRKY18(1)                                                 ------->TEIL          <------MYB83                                                     <---------ANAC58          <------MYB46(1)                        <---------ALFIN1          <---------AtLEC2         --------->MYB59   ------>MYB46(1)     ------>ZmHOX2a(1)           <---------ANAC46    <---------YAB1 --------->ANAC46 ------>ZmHOX2a(1)  ------>ZmHOX2a(1)   <---------ANAC58<---------    <---------AHL20(2)     ------>MYB83    <-----------GT1    --------->GLK1(2)<---------CCA1(2) -------->AGL15 <---------ATHB12 ------>ZmHOX2a(1)------>ZmHOX2a(1)      <---------YAB1   <---------DAG2   ttatgtataattaggtcaatcacatcaccaatctcctcctccaattctcctcctctccttccaaattctagggttttgcttgtatctcaccccctttctc  19268300                                                               ------>ZmHOX2a(2)                                                              --------->CCA1(2)                                                              <------ZmHOX2a(2)                                                             <---------ARR11(3)                                                             --------->ARR14(2)                                                             --------->ARR11(3)                                                             <---------ARR14(2)                                                <---------ALFIN1                                            <-----------HVH21--------->AGP1                                       <---------AHL20(2)    <---------AGP1                         <                                     <---------YAB1         <---------GLK1(1)                       =              --------->At5g28300   <---------AHL20(1)      --------->GLK1(1)     <---------YAB1    -    --------->STY1(1)              --------->ATHB51 --------->TOE1(3)        --------->YAB1         -    <---------STY1(1)              --------->AHL20(2)  ---------->DOF2    ---------->DOF2           < -DOF2       ----------->GT1      <---------MYB52(1)--------->TOE2(3)     ===========================   aattccctagggaaactgtgaatttcatcaaattccattattttttggtcacacccttaaagagatctgagagttctaaagatgatgacagatttatctc  19268400                                                                             <-------MYC4                                                                             <-------MYC2     --------->At4g35610                                                     ------->MYC2     --------->CCA1(2)             --------->At4g35610                       <-------MYC3 ---------TGA1a                    <---------At4g35610        --------->At4g35610 ===================================bZIP_DOF                  <---------At4g35610     ---------->DOF2 -------->TGA1a          ---------->DOF2        <------ZmHOX2a(1)        <---------ZAT14 -------->O2          --------->ANAC58    >>>>>>>>>TBF1----------->HVH21 --------->ZAT18 ---------O2          --------->ANAC58--------->At4g35610 <---------REM1(1)  ------->MYC3 =========bZIP_DOF>>>>>>>>>TBF1 <---------MYB52(1)   <---------ANAC46    <---------ZAT18   tcacgagagatgaagatgaagaagaagcaaagcccttagcagaagaagaaggagcgcgtgaagtagcagacagagagcacatgttcgacaaagttgtgac  19268500  Previous    Next  AGI:  At2g46870.1    Description:  NGA1 (NGATHA1); transcription factor. similar to NGA2 (NGATHA2), transcription factor [Arabidopsis thaliana] (TAIR:AT3G61970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24343.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 19267987    to: 19269473    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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