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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ZAT18
--------->
YAB1
--------->
ZAT6
--------->
AHL20(2)
<---------
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
<--------
--------->
YAB1
--------->
ZAT6
--------->
AHL20(1)
<--------
--------->
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
--------->
AHL20(2)
<------------
CBF
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
------------>
CBF
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
----------->
GT1
<---------
AHL20(2)
--------->
AHL20(2)
ttgatttaattaaaactagtgggcatttaatatttgaaaataatactatttgttaaatcccaattgaaaatttaataacatttaatataattaacttttt
19239300
--------->
HSFB2a(2)
------->
GAMYB
------->
TEIL
<---------
AHL20(2)
-------->
P
--------->
AHL20(2)
<---------
At4g35610
<----------
DOF2
===========
--------->
ZAT2
<---------
ARR11(3)
--------->
MYB46(3)
--------->
At4g35610
<---------
DAG2
-------->
P
--------->
ANAC58
<---------
ZAT2
<-----------
ARR10
------>
MYB83
--------->
ANAC58
<---------
At4g35610
<-----------
GT1
------>
MYB46(1)
<---------------
AtSPL8
<-------
TEIL
--------->
GLK1(2)
<---------
AHL20(2)
---------->
DOF2
--------->
YAB1
--------->
ARR11(3)
--------->
AHL20(2)
--
DOF2
---------->
DOF2
<---------
WOX13(1)
--------->
RVE1(1)
--------->
AHL20(1)
-
DAG2
<----------
ID1
------------>
CBF
---------->
DOF2
--------->
AHL20(2)
<---------
AHL20(1)
tgaaaaaaggaacaaaaaaagccatccaatttgaatgatacatagagcagctgaaaaaaaaaaatctaccttttagaatttattaaatccaaccaaaaat
19239400
--------->
O2
--------->
ANAC46
<-------
PIF5
<-------
MYC2
------->
MYC3
<-------
MYC3
------->
PIF5
<-------
MYC4
------->
MYC2
====================
<---------
TGA1a
---------->
DOF2
--------->
O2
--------->
LBD16
<---------
YAB1
------->
MYC4
<---------
ANAC58
------------>
CBF
<-----------
HVH21
<-----------
ARR10
--------->
YAB1
<---------
O2
<---------
ARR14(2)
------------>
CBF
--------->
TGA1a
--------->
ARR14(2)
--------->
ANAC58
>>>>>>>>>>
HY5
----------->
HVH21
<---------
ARR11(3)
<------
MYB83
--------->
ANAC58
--------->
ANAC55(2)
--------->
ARR11(3)
<------
MYB46(1)
<---------
ALFIN1
<---------
ALFIN1
--------->
ARR14(2)
<---------
ANAC58
--------->
ANAC46
--------->
TOE1(2)
<---------
ARR11(3)
<---------
ANAC46
----------->
RAV1(1)
--------->
TOE2(2)
--------->
ARR11(3)
<---------
ALFIN1
--------->
MYB59
=======================================
MYC_MYB
--------->
ZAT6
<---------
CCA1(2)
<---------
TOE2(3)
caaacttagccacacaattacaatagaaacccacgtgtcatccac
atgaccactagatattcagacgaatatctccacttccgtagagcgattaggttaa
19239500
-
<
<--
---
--------->
ALFIN1
---
<---------
TOE1(3)
<--
<---------
TOE2(3)
------
--------->
DAG2
<------
<---------
AtMYB61
<------
<-------
MYC4
<-------
------->
MYC2
<-------
------->
MYC4
--------
<-------
MYC3
--------
------->
MYC3
--------->
LBD16
<<<<<<<<
<-------
MYC2
--------->
ARR14(2)
--------->
ANAC46
--------
<---------
TGA1a
<---------
PCF5
------>
NtERF2
--------
--------->
O2
------->
TEIL
<------
ZmHOX2a(1)
--------->
ZAT2
========
<---------
ANAC55(2)
--------->
At4g35610
--------->
At4g35610
--------
<---------
O2
<---------
TCP16(2)
--------->
AtMYB61
--------->
RAP2.6(2)
<-------
<--------
ABF1
<---------
ARR14(2)
<---------
ALFIN1
<---------
At4g35610
--------
--------->
ANAC55(2)
--------->
At4g35610
--------->
ARR14(2)
--------->
ANAC46
--------->
TGA1a
--------->
TOE1(2)
<---------
ALFIN1
--------->
ANAC58
<-----------------------
TaNAC69(2)
--------->
AtMYB61
<<<<<<<<<<<<<<<<<
LFY
--------
===========
bZIP_DOF
<---------
At4g35610
<---------
ARR14(2)
--------->
YAB1
--------->
ANAC58
tgacacgtgttaaggtggacctgcgaagcagaggaccacctccaccgaatcagccgcgatacagagaaaatcaaaacaatggctcatattaa
gccacgtc
19239600
-------->
ZAT14
---------
ZAT14
-------
At4g35610
------>
At4g35610
------>
ZAT2
-------
ZAT2
--->
TGA2(2)
-----
HVH21
-----
TGA1
--
TGA1a
--
O2
->
O2
--------->
ZAT14
--------->
DOF5.7(2)
->
ANAC58
<---------
MYB52(1)
<<
AtbZIP1
<---------
ALFIN1
->
ANAC58
--------->
ANAC46
->
TGA1a
<-----------
GT1
=========================
bZIP_DOF
<
->
bZIP60(2)
<----------
DOF2
<---------
GLK1(1)
<----------
CDC5
-
--
bZIP60(1)
<------
NtERF2
----------->
GT1
<---------
AHL20(2)
---------->
DOF2
<
->
bZIP60(1)
--------->
ANAC58
--------->
TOE2(3)
<------------
CBF
<----------
ID1
---
->
ANAC46
--------->
ANAC58
--------->
At5g28300
----------->
GT1
<---------
At4g35610
<----------
DOF2
agctcagtgaaggcccgctttgttacacaccgttaattagatttctcaaattgtttatttgctctgagcttatacaacaaagtcttcttctttctctgag
19239700
<-------
GAMYB
<---------
MYB46(3)
<---------
ANAC58
---------->
DOF2
<---------
ANAC46
------>
MYB46(1)
<---------
ANAC58
------>
MYB83
<---------
RVE1(1)
<---------
MYB46(2)
<---------
CCA1(1)
--------->
CCA1(2)
---------
ARR14(2)
--------->
ARR11(3)
<<<<<<<<<
TBF1
<-----------
GT1
-------->
ARR11(3)
------>
ZmHOX2a(2)
----------->
GT1
<-----------
GT1
---------
ARR11(3)
*
TSS
<---------
ARR11(3)
<----------
DOF2
<---------
ARR11(3)
<----
-------->
ARR10
<---------
YAB1
<---------
MYB59
<-----------
GT1
<----------
DOF2
<---------
RVE1(1)
aagatattttcgtggtt
gtgatcgaaagataccaaactaaagagtttaactttcttcttccttcttctttacttcaacatctgatattttctctctctct
19239800
<-------
GAMYB
---------->
DOF2
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<--
--------->
CCA1(2)
<-----------
GT1
<-----------
RAV1(1)
--------->
ARR11(3)
--------->
GLK1(2)
<----------
DOF2
<---------
ARR11(3)
<---------
GLK1(2)
<---------
ANAC46
<------
MYB83
--------->
AGP1
------>
ZmHOX2a(2)
<---------
ANAC58
<-------
------
DOF2
<---------
AGP1
--------->
ARR11(3)
<---------
ANAC58
<------
MYB46(1)
tttattcagtctgaaacaatatttctcggtagattaagatctaaagctcgttgatctagattcttgtttctatttttgtgtgttttaggctttgttggtt
19239900
--------->
ICU4
<---------
YAB1
<---------
YAB1
<---------
ANAC46
--------->
ICU4
---
--------->
ALFIN1
<---------
TOE2(3)
---
---------
GT1
--------->
GLK1(2)
--------->
YAB1
<--
--
MYB46(3)
<---------
MYB52(1)
<---------
ANAC46
<---------
ZAT6
---------->
DOF2
ttaccaagtgttgtgattcagtttgttttgaggtctgagtct
atgggggagattgtggttttaagtagtgatgatggtatggagactataaagaacagag
19240000
<---------
YAB1
<--
--------->
ALFIN1
------->
TEIL
------->
TEIL
<------
<---------
At4g35610
--------->
ARR14(2)
--------->
At4g35610
<-------
--------->
At4g35610
<---------
ARR14(2)
<-------
GAMYB
<---------
ICU4
------->
DOF2
<---------
ANAC46
--------->
ZAT14
<---------
MYB46(3)
--------->
YAB1
------>
ZAT14
--------->
ZAT14
<---------
ZAT14
--------->
MYB52(2)
<---------
ATHB12
-------
ZAT14
<---------
ZAT14
----------------->
AGL1
<---------
MYB52(1)
<-----------
HVH21
taaagtcatcggaagttgttcagtgggagaagtatttgcctaaaactgtacttagggttttgttagttgaatctgattactcaactcgtcaaatcatcac
19240100
<---------
TOE1(3)
<----------
DOF2
<---------
TOE2(3)
<------
MYB83
---------->
DOF2
--------->
ATHB12
<<<<<<<<<
MYB98
<---------
YAB1
-------
ZAT18
---------->
DOF2
<----------
DOF2
<---------
YAB1
<---------
TOE2(3)
---
ICU4
<-------
GAMYB
<------
MYB46(1)
<---------
ANAC58
<---------
AHL20(2)
<-------
--
YAB1
----------->
GT1
<---------
AtMYB61
<---------
ANAC58
--------->
AHL20(2)
--------
tgcccttcttcgtaaatgctgttacaaag
gtcgattggtctttcctttcattagcttatgttaaagttttcatttttatgttttgatgtttgaaattaaa
19240200
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AGI:
At2g46787.1
Description:
unknown protein
Range:
from: 19239446
to: 19239592
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At2g46790.1
Description:
APRR9 (PSEUDO-RESPONSE REGULATOR 9); transcription regulator. Identical to Two-component response regulator-like APRR9 (APRR9) [Arabidopsis Thaliana] (GB:Q8L500;GB:O81035;GB:Q9LKL1); similar to pseudo-response regulator, putative / timing of CAB expression 1-like protein, putative [Arabidopsis thaliana] (TAIR:AT2G46670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48570.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain CheY-like (InterPro:IPR011006); contains InterPro domain CCT (InterPro:IPR010402)
Range:
from: 19239718
to: 19242156
Orientation: Forward
Links:
TAIR
MIPS
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