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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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             ------->TEIL
             --------->GLK1(2)                                                                   ---
        --------->YAB1                                                                           ---
    --------->YAB1                                                                           -------
    -------->ATHB1                                                                           -------
    --------->ATHB12                                                                         -------
   <---------YAB1                                                                      <---------ANAC46
   <---------ATHB12                          ---------->DOF2         <---------TOE2(3) <---------ANAC58
 ------>ZmHOX2a(1)               >>>>>>>>>TBF1                 <-------TEIL            <---------ANAC58
 
gttcctatcattgatgaatctgaagttgagtttgaagaagaaatcaaacaaagactcgtttttagattcattaaggcatttcaacaagtagcttataagc  18940200
                                               <-------TEIL                                  -------
                                             <---------PCF2                                ---------
                                             --------->TCP20                               <--------
                                            <------MYB83                            --------->WRKY38(1)
                                            <------MYB46(1)                         ----------->HVH21
------>ANAC58                              <---------MYB46(3)                       --------->WRKY12
------>ANAC58                             --------->ALFIN1                        <-------GAMYB
-->ANAC58                           <---------ZAT6                               <---------MYB46(3)
-->ANAC46             ---------->DOF2<-----------HVH21   ----------->HVH21  --------->ARR14(2)
-->ANAC58 ---------->DOF2         <---------At5g28300  ----------->GT1      <---------ARR14(2)<-----
 
aagcaaaaaaaaaaaaagaagaaggcaaagagagaattactgtcagtgggtccatggaatgtgacatagaacatttgcaaatcgtcgttgacagtatcca  18940300
                                   <---------ICU4
                                   <--------HAHB4
                                   --------->ATHB12
                                  --------->ICU4         >>>>>>>>>TBF1
    <---------ATHB12            --------->YAB1        >>>>>>>>>TBF1
-->MYB46(3)          <---------AHL20(2)            >>>>>>>>>TBF1                      ----------->GT1
>ARR14(2)           --------->AHL20(2)       >>>>>>>>>TBF1                       ---------->DOF2
-ARR14(2)--------->YAB1        <-------TEIL------------------------>ANAC81  <------ZmHOX2a(2)
----ALFIN1       ------>ZmHOX2a(1)<---------YAB1>>>>>>>>>TBF1         ----------->RAV1(1)        ---
 
ccttgtaatcactcatcatcctatttaatccaaattcatcattaagaagaagaagaagaagaagaaatttcatcaacagatcaaaaaagaagaaaaaccc  18940400
                                                                                     ------>NtERF2
                                                                                    --------->bZIP60(2)
                                                                                    --------->ANAC58
                                                                                    --------->bZIP60(1)
                                                                                    <---------bZIP60(1)
                                                                                    --------->ANAC46
                                                                                    --------->ANAC58
                                                                                    --------->DEAR3(1)
                                                                                   --------->RAP2.3(1)
                                                                                   <------NtERF2
                                                                                   --------->ATERF1(1)
                                                                                  <---------RAP2.3(1)
                                                                                  ------>NtERF2
                                                                                  <---------ATERF1(1)
                                                                                 ----------->HVH21
                                                                                 --------->DEAR3(1)
                         <---------ATHB12                --------->ARR14(2)      <---------DEAR3(1)
                       --------->WOX13(1)                <---------ARR14(2)     <------NtERF2
                 <---------AHL20(2)                     <---------CCA1(2)     <---------DEAR3(1)<---
                 <---------YAB1                    --------->YAB1           <---------ANAC58    ----
               --------->CCA1(2)                  <-------TEIL              <---------ANAC58   -----
              <---------ARR11(3)           ----------->RAV1(1)<---------CCA1(2)<---------ATERF1(1) <
------>LBD16  --------->ARR11(3)        ------->TEIL  --------->YAB1    <---------MYB52(1)     <----
 
cagagaataaatctagagatataattcaatcaattggaaaatgaacccacagtttcatcatatccatctctcgacgtttgctcggcgacgccatggcaga  18940500
        ------>ZmHOX2a(1)
      <------------------------ANAC81                                                            <--
   <----------DOF2                                                                             -----
 <------------------------ANAC81                                                           <--------
------GLK1(1)                       <---------ARR14(2)                         *TSS--------->AHL20(2)
----->GLK1(1)          <<<<<<<<<TBF1--------->GLK1(2)                        ---------->DOF2  <-----
---->ARR14(2)       <<<<<<<<<TBF1   --------->ARR14(2)             --------->GLK1(2)       ---------
-----------GT1   <<<<<<<<<TBF1     <---------GLK1(2)             <---------HSFB2a(1)      --------->YAB1
-----ARR14(2) <<<<<<<<<TBF1      <---------TOE2(3)               --------->HSFB2a(1)     <---------YAB1
 
tttctcctttcctcttcttcttcttcttcttctattaagaatctggttttagagagagagagagagaaagattccaaaatgaaagaaaaaatatgatatt  18940600
       <------ZmHOX2a(2)
       ------------>CBF
      --------->ARR11(3)                                                                         <--
      <---------ARR11(3)                                                                   <--------
  ---------->DOF2                                                                          <--------
-------YAB1                                                      <----------DOF2     <---------ICU4
---->YAB1                                                       <---------DAG2       --------->ATHB12
-ARR11(3)   --------->AHL20(2)                               <-----------GT1  <----------DOF2 <-----
----YAB1   <---------ATHB12             <-----------GT1     <-----------GT1 ---------->ID1<---------ANAC58
>ARR11(3)--------->WOX13(1)     <----------DOF2          <---------ICU4 <----------DOF2   <---------ANAC58
 
ataagaaaagatcaatgaaatggacatttgccttactttcatttatccctcaaaattccatttttacccttttgcctttgtctttcattcattgctttat  18940700
                                   <---------YAB1
                            --------->AHL20(1)                                  ----------->GT1
                            --------->ARR11(3)                            --------->WOX13(1)
                            <---------AHL20(1)                           --------------->AGL15
                         --------->YAB1                                 ----------------->AGL1
                        <---------YAB1                                  <-----------------AGL1
                      --------->YAB1                        <----------DOF2    <---------TOE1(3)
                     <---------AHL20(2)                    --------->TOE1(3)   <---------TOE2(3)
--------DOF2        <---------AHL20(1)                     --------->TOE2(3)<---------ATHB12     ---
-DAG2               <---------AHL20(2)                  <---------GLK1(2)<---------------AGL15 <----
--DOF2              --------->AHL20(2)<---------YAB1<-------TEIL   ---------->DOF2       --------->YAB1
----ARR11(3)        --------->AHL20(1)------->TEIL --------->CCA1(2)    ----------------->AGL3 <----
 
cttttttttttttttttctccaatataatgatatattgatgaatattgtttgagatacagaacctttacaaaaagaccaattaaggttacaagaatagtc  18940800
       --------->AtMYB61
      --------->MYB46(3)
     -------->P
   --------->MYB46(3)
 --------->ANAC58
 --------->ANAC46                                      ---------->DOF2         --------->GLK1(2)
 --------->ANAC58   <------ZmHOX2a(1)       <---------MYB52(2)                <---------GLK1(2)
------>AtLEC2   ---------->DOF2        --------->WRKY18(1)                    --------->ARR14(2)
-----ANAC58  --------->LBD16 <---------WOX13(1)  --------->AtMYB61          ----------->ARR10
-----ANAC58<-----------------AGL1     ------------------------>ANAC81   <------ZmHOX2a(1)
 
gtgcaaacaaccattccccaaaaggaccgaagattgacaatggtcaaacaaaccaaaacaaagaaacaaggcctaggaagagattctctcaccctcaaat  18940900
                             <------NtERF2
                             ------>NtERF2
                             --------->LBD16
                            ----------->RAV1(1)
                            --------->RRTF1(2)
                            --------->RAP2.6(2)
                            --------->DEAR3(1)
                            --------->RAP2.3(2)
                         ------->GAMYB
                        <---------MYB55(2)
                        <------------AtMYB77
                        --------->DEAR3(2)
                        --------->MYB46(3)
                       ------>MYB83
                       -------->P
                 --------->GLK1(1)                                                                --
             <---------TOE2(3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            --
         ------>NtERF2 ------>MYB46(1)                 <-----------GT1               ---------------
       --------->ATERF1(1) --------->RAP2.3(1)      <----------DOF2             --------->At4g35610
       --------->MYB46(3)--------->DEAR3(1)   ------>MYB46(1)            --------->YAB1         ----
      <---------ATERF1(1)--------->ANAC46     ------>MYB83  <---------ALFIN1 ---------->DOF2   -----
 
agttgatggagccaccaaggatgtccaaccgccgcataagattgaaacctatctcctttaacaacactctgagcaataagaaaagctcccctgttaaaac  18941000
         --------->ANAC46
       ------>ZmHOX2a(1)                                         <----------DOF2
 <----------DOF2                                           <---------DAG2
<---------DAG2                                             <----------DOF2
---->MYB83                                                <---------ANAC58
---->MYB46(1)    ------>MYB83<---------ATHB12             <---------ANAC58  <----------DOF2        <
------>WRI1      ------>MYB46(1)                     --------->ATHB12  <----------DOF2   <----------DOF2
----->DEAR3(1)<---------HSFB2a(1)                    <---------ICU4 <---------ARR11(3)   ------>ZmHOX2a(1)
---->DEAR3(2) --------->HSFB2a(1)               <-------TEIL  <---------ARR11(3)        --------->TOE2(3)
 
cgaccttttcctccgaaaccttccaatctccaatcttctccaaaaaatgagttcattcattgctttatctttatcttttctttttgttaatcctttaatc  18941100
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AGI:  At2g46030.1   
Description:  UBC6 (UBIQUITIN-CONJUGATING ENZYME 6); ubiquitin-protein ligase. Identical to Ubiquitin-conjugating enzyme E2-21 kDa 3 (UBC6) [Arabidopsis Thaliana] (GB:P42750;GB:O49739;GB:O82365); similar to UBC4 (UBIQUITIN CONJUGATING ENZYME 4), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G41340.1); similar to ubiquitin carrier protein 4 [Glycine max] (GB:AAF03236.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme (InterPro:IPR015581); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135)
Range:  from: 18939092    to: 18940580    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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