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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------->
TEIL
--------->
GLK1(2)
---
--------->
YAB1
---
--------->
YAB1
-------
-------->
ATHB1
-------
--------->
ATHB12
-------
<---------
YAB1
<---------
ANAC46
<---------
ATHB12
---------->
DOF2
<---------
TOE2(3)
<---------
ANAC58
------>
ZmHOX2a(1)
>>>>>>>>>
TBF1
<-------
TEIL
<---------
ANAC58
gttcctatcattgatgaatctgaagttgagtttgaagaagaaatcaaacaaagactcgtttttagattcattaaggcatttcaacaagtagcttataagc
18940200
<-------
TEIL
-------
<---------
PCF2
---------
--------->
TCP20
<--------
<------
MYB83
--------->
WRKY38(1)
<------
MYB46(1)
----------->
HVH21
------>
ANAC58
<---------
MYB46(3)
--------->
WRKY12
------>
ANAC58
--------->
ALFIN1
<-------
GAMYB
-->
ANAC58
<---------
ZAT6
<---------
MYB46(3)
-->
ANAC46
---------->
DOF2
<-----------
HVH21
----------->
HVH21
--------->
ARR14(2)
-->
ANAC58
---------->
DOF2
<---------
At5g28300
----------->
GT1
<---------
ARR14(2)
<-----
aagcaaaaaaaaaaaaagaagaaggcaaagagagaattac
tgtcagtgggtccatggaatgtgacatagaacatttgcaaatcgtcgttgacagtatcca
18940300
<---------
ICU4
<--------
HAHB4
--------->
ATHB12
--------->
ICU4
>>>>>>>>>
TBF1
<---------
ATHB12
--------->
YAB1
>>>>>>>>>
TBF1
-->
MYB46(3)
<---------
AHL20(2)
>>>>>>>>>
TBF1
----------->
GT1
>
ARR14(2)
--------->
AHL20(2)
>>>>>>>>>
TBF1
---------->
DOF2
-
ARR14(2)
--------->
YAB1
<-------
TEIL
------------------------>
ANAC81
<------
ZmHOX2a(2)
----
ALFIN1
------>
ZmHOX2a(1)
<---------
YAB1
>>>>>>>>>
TBF1
----------->
RAV1(1)
---
ccttgtaatcactcatcatc
ctatttaatccaaattcatcattaagaagaagaagaagaagaagaaatttcatcaacagatcaaaaaagaagaaaaaccc
18940400
------>
NtERF2
--------->
bZIP60(2)
--------->
ANAC58
--------->
bZIP60(1)
<---------
bZIP60(1)
--------->
ANAC46
--------->
ANAC58
--------->
DEAR3(1)
--------->
RAP2.3(1)
<------
NtERF2
--------->
ATERF1(1)
<---------
RAP2.3(1)
------>
NtERF2
<---------
ATERF1(1)
----------->
HVH21
--------->
DEAR3(1)
<---------
ATHB12
--------->
ARR14(2)
<---------
DEAR3(1)
--------->
WOX13(1)
<---------
ARR14(2)
<------
NtERF2
<---------
AHL20(2)
<---------
CCA1(2)
<---------
DEAR3(1)
<---
<---------
YAB1
--------->
YAB1
<---------
ANAC58
----
--------->
CCA1(2)
<-------
TEIL
<---------
ANAC58
-----
<---------
ARR11(3)
----------->
RAV1(1)
<---------
CCA1(2)
<---------
ATERF1(1)
<
------>
LBD16
--------->
ARR11(3)
------->
TEIL
--------->
YAB1
<---------
MYB52(1)
<----
cagagaataaatctagagatataattcaatcaattggaaaatgaacccac
agtttcatcatatccatctctcgacgtttgctcggcgacgccat
ggcaga
18940500
------>
ZmHOX2a(1)
<------------------------
ANAC81
<--
<----------
DOF2
-----
<------------------------
ANAC81
<--------
------
GLK1(1)
<---------
ARR14(2)
*
TSS
--------->
AHL20(2)
----->
GLK1(1)
<<<<<<<<<
TBF1
--------->
GLK1(2)
---------->
DOF2
<-----
---->
ARR14(2)
<<<<<<<<<
TBF1
--------->
ARR14(2)
--------->
GLK1(2)
---------
-----------
GT1
<<<<<<<<<
TBF1
<---------
GLK1(2)
<---------
HSFB2a(1)
--------->
YAB1
-----
ARR14(2)
<<<<<<<<<
TBF1
<---------
TOE2(3)
--------->
HSFB2a(1)
<---------
YAB1
tttctcctttcctcttcttcttcttcttcttctattaagaatctggttttagagagagagagagagaaagattccaaaat
gaaagaaaaaatatgatatt
18940600
<------
ZmHOX2a(2)
------------>
CBF
--------->
ARR11(3)
<--
<---------
ARR11(3)
<--------
---------->
DOF2
<--------
-------
YAB1
<----------
DOF2
<---------
ICU4
---->
YAB1
<---------
DAG2
--------->
ATHB12
-
ARR11(3)
--------->
AHL20(2)
<-----------
GT1
<----------
DOF2
<-----
----
YAB1
<---------
ATHB12
<-----------
GT1
<-----------
GT1
---------->
ID1
<---------
ANAC58
>
ARR11(3)
--------->
WOX13(1)
<----------
DOF2
<---------
ICU4
<----------
DOF2
<---------
ANAC58
ataagaaaagatcaatgaaatggacatttgccttactttcatttatccctcaaaattccatttttacccttttgcctttgtctttcattcattgctttat
18940700
<---------
YAB1
--------->
AHL20(1)
----------->
GT1
--------->
ARR11(3)
--------->
WOX13(1)
<---------
AHL20(1)
--------------->
AGL15
--------->
YAB1
----------------->
AGL1
<---------
YAB1
<-----------------
AGL1
--------->
YAB1
<----------
DOF2
<---------
TOE1(3)
<---------
AHL20(2)
--------->
TOE1(3)
<---------
TOE2(3)
--------
DOF2
<---------
AHL20(1)
--------->
TOE2(3)
<---------
ATHB12
---
-
DAG2
<---------
AHL20(2)
<---------
GLK1(2)
<---------------
AGL15
<----
--
DOF2
--------->
AHL20(2)
<---------
YAB1
<-------
TEIL
---------->
DOF2
--------->
YAB1
----
ARR11(3)
--------->
AHL20(1)
------->
TEIL
--------->
CCA1(2)
----------------->
AGL3
<----
cttttttttttttttttctccaatataatgatatattgatgaatattgtttgagatacagaacctttacaaaaagaccaattaaggttacaagaatagtc
18940800
--------->
AtMYB61
--------->
MYB46(3)
-------->
P
--------->
MYB46(3)
--------->
ANAC58
--------->
ANAC46
---------->
DOF2
--------->
GLK1(2)
--------->
ANAC58
<------
ZmHOX2a(1)
<---------
MYB52(2)
<---------
GLK1(2)
------>
AtLEC2
---------->
DOF2
--------->
WRKY18(1)
--------->
ARR14(2)
-----
ANAC58
--------->
LBD16
<---------
WOX13(1)
--------->
AtMYB61
----------->
ARR10
-----
ANAC58
<-----------------
AGL1
------------------------>
ANAC81
<------
ZmHOX2a(1)
gtgcaaacaaccattccccaaaaggaccgaagattgacaatggtcaaacaaaccaaaacaaagaaacaaggcctaggaagagattctctcaccctcaaat
18940900
<------
NtERF2
------>
NtERF2
--------->
LBD16
----------->
RAV1(1)
--------->
RRTF1(2)
--------->
RAP2.6(2)
--------->
DEAR3(1)
--------->
RAP2.3(2)
------->
GAMYB
<---------
MYB55(2)
<------------
AtMYB77
--------->
DEAR3(2)
--------->
MYB46(3)
------>
MYB83
-------->
P
--------->
GLK1(1)
--
<---------
TOE2(3)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
--
------>
NtERF2
------>
MYB46(1)
<-----------
GT1
---------------
--------->
ATERF1(1)
--------->
RAP2.3(1)
<----------
DOF2
--------->
At4g35610
--------->
MYB46(3)
--------->
DEAR3(1)
------>
MYB46(1)
--------->
YAB1
----
<---------
ATERF1(1)
--------->
ANAC46
------>
MYB83
<---------
ALFIN1
---------->
DOF2
-----
agttgatggagccaccaaggatgtccaaccgccgcataagattgaaacctatctcctttaacaacactctgagcaataagaaaagctcccctgttaaaac
18941000
--------->
ANAC46
------>
ZmHOX2a(1)
<----------
DOF2
<----------
DOF2
<---------
DAG2
<---------
DAG2
<----------
DOF2
---->
MYB83
<---------
ANAC58
---->
MYB46(1)
------>
MYB83
<---------
ATHB12
<---------
ANAC58
<----------
DOF2
<
------>
WRI1
------>
MYB46(1)
--------->
ATHB12
<----------
DOF2
<----------
DOF2
----->
DEAR3(1)
<---------
HSFB2a(1)
<---------
ICU4
<---------
ARR11(3)
------>
ZmHOX2a(1)
---->
DEAR3(2)
--------->
HSFB2a(1)
<-------
TEIL
<---------
ARR11(3)
--------->
TOE2(3)
cgaccttttcctccgaaaccttccaatctccaatcttctccaaaaaatgagttcattcattgctttatctttatcttttctttttgttaatcctttaatc
18941100
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AGI:
At2g46030.1
Description:
UBC6 (UBIQUITIN-CONJUGATING ENZYME 6); ubiquitin-protein ligase. Identical to Ubiquitin-conjugating enzyme E2-21 kDa 3 (UBC6) [Arabidopsis Thaliana] (GB:P42750;GB:O49739;GB:O82365); similar to UBC4 (UBIQUITIN CONJUGATING ENZYME 4), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G41340.1); similar to ubiquitin carrier protein 4 [Glycine max] (GB:AAF03236.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme (InterPro:IPR015581); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135)
Range:
from: 18939092
to: 18940580
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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