Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->AHL20(2)                                        <---------MYB59                                       --------->ANAC46                                       --------->ANAC58                                       --------->ANAC58                                      ------>MYB83                                    <---------MYB46(2)                               --------->YAB1<---------AHL20(2)                    --------->AtMYB61 -------->P                    <---------ALFIN1<---------MYB111(1)           --------->YAB1     <---------ATHB12          <---------YAB1    --------->WOX13(1)   --------->YAB1        --------->YAB1    --------->ZAT14   <---------ATHB12                           <---------ARR14(2) ------->YAB1      --------->MYB46(3) ------>MYB46(1)                                  --------->ARR14(2) --------ICU4    --------->AtMYB61  <---------MYB59------>ZmHOX2a(1)          --------->YAB1 ------ARR11(3) --------->MYB46(3)  --------->AtMYB61                     <---------MYB52(2)   <-----   atcttcactagtatgatgaccaccactctgcaatcaaacctacccaattaatcctaatttgcagactaattcagaaacaaacatagccagttctccagtg  18808100                                                                                           ----------                                                                                         --------->ARR11(3)                                                                                      <---------TOE2(3)                                                                                     ---------->DOF2                                                                                 ----------->GT1                                                                                <---------TOE2(2)                        --------->ZAT14                                         <---------TOE1(3)                        <---------ZAT14               >>>>>>>>>TBF1             <---------TOE1(2) ----ATHB12 ----------->GT1                      --------->ANAC46               <---------TOE2(3) <--   attaaacttgcattcagtaaaatcagtgaagaagagtaccttggtgaaaacacgaagaagaaggggacatgtctgcgattcgaaggttaaagataaagaa  18808200                                   ---------->DOF2                                   --------->MYB52(1)                                --------->TOE1(3)                                --------->TOE2(3)                             <---------GLK1(1)                       ---------->DOF2                   --------------->AGL15                   --------->TOE2(3)                            <---------ICU4                   <---------------AGL15              --------->ARR14(2)                      -------         ----------->GT1     --------->GLK1(1)        <---------ARR14(2)                      -------   --------->YAB1 <-----------------AG                <---------GLK1(2)                       <------   <---------ICU4 ----------------->AGL2    --------->ICU4      --------->YAB1               <------ZmHOX2a(2)  <---------ATHB12<-----------------AGL1    <---------YAB1     --------->ICU4                ======== >DOF2 <-------TEIL--------->TOE1(3)   <------ZmHOX2a(1)  <---------HSFB2a(2)           <-----------GT1 -------ATHB12    ----------------->AGL1  --------->YAB1  --------->HSFB2a(2)      <---------DAG2   atcaataagtacagataaaaaccctaaaaggaaaccctaaaggatgatgattcaacgattcgcgaataatgaaatcgaacacaaaccttttcacgatcga  18808300                               <---------DOF5.7(2)                             --------->DOF5.7(2)                            <-------GAMYB                           <------MYB83                           <------MYB46(1)                           <---------MYB46(3)                        <-------GAMYB              --------->At5g28300                       --------->MYB55(2)       <------NtERF2                       --------->MYB111(1)    <---------DEAR3(1)                       <---------MYB46(3)     --------->ALFIN1                    ------------>MYB.PH3(2)  --------->ATERF1(1)    <---------TOE1(3)  --------->MYB111(2)  --------->ZAT2    <---------TOE2(3)<-------GAMYB          <---------ZAT2        <---------ALFIN1   <-----------RAV1(2)<--------P           <---------DEAR3(1)     --------->DEAR3(1)  <-------TEIL     <---------AtMYB61       <---------AtMYB61   <---------ALFIN1 -->ETT(2)        <------ZmHOX2a(1)    <---------HSFB2a(2)     --------->ANAC46 ---->HVH21     --------->ALFIN1 --------->ANAC46  <------NtERF2  --------->AtMYB61                <- ---ETT(2)    <---------ANAC46<---------WRKY38(1)<---------ANAC46--------->MYB46(3)          <------- ========================HOX2a_HOX2a   --------->HSFB2a(2)    --------->MYB46(3)   --------->At4g35610   caggttcaggtttagggcgaggaggttgttggttaacgcctctcggaggtggcggtaatggtctcccaccaccttgtcttctcgctgcttcagccatctc  18808400                                                                 <---------DAG2                  <---                                                                 <----------DOF2                <----                                                            --------->SPL7                      <----                                                          ----------->HVH21              ------>MYB83                                                          <---------SPL7                 --------->MYB52(1)                                                         *TSS<-----------------AGL1      ------>MYB46(1)                                                         ------>ZmHOX2a(2)             <---------MYB59 ---------DOF2                 >>>>>>>>>TBF1          --------->ATHB12               <--------------- --CCA1(2)        <---------ICU4                    <---------WOX13(1)              <-----------GT1   tctttttctctcgagagaaatcactacgacgaagaagaaggtaatggcacagagattgatcggaccgctttaggcccatacttatttaacctaatgggcc  18808500                                                                            <---------AHL20(2)                                                                          <---------AHL20(2)                                                                         --------->AHL20(1)                                                                         <---------AHL20(1)                                                                        <---------AHL20(2)    <------                                             <---------ATHB12         --------->AHL20(2)      <------                                         ------------>CBF            <---------AHL20(1)       =======      ------------>CBF                  >>>>>>>>>>>>>>>>>LFY         --------->AHL20(1) <----------DOF2 -------DOF2                        <-----------RAV1(1)      --------->CCA1(2)       <-----------GT1 ------DOF2                     <---------GLK1(2)           --------->ARR11(1)    <-----------GT1 <-- -----DAG2                      <---------ARR11(3)          <---------ARR11(3)<---------AHL20(2)  <-- --AGL1          <---------MYB59--------->ARR11(3)<---------ANAC46  --------->AHL20(2)  <---------DAG2   ttttgtacaacaatttgggcctaactcgtttatagattttgttgccaatggtccgtttaaaagatttgaaatatatatattttttttctactttttcttt  18808600        <-----------GT1 ----DOF2  --------->TOE2(3)                                                                        < ---------AGL15      <-----------------AGL3   <------ZmHOX2a(2)              <----------ID1        <- ======================================MADS_MADS                       ---------->DOF2           ---- -------ANAC58     <---------ARR11(3)        <---------ARR11(3)     --------->AHL20(2)        ------- -------ANAC58     --------->ARR11(3)        --------->ARR11(3)   --------->YAB1          --------->WOX13(1)   tcttggtttataacctttgaatatctatatttgaaacacacattgaagatcactaactcgaaattcaaaaataaaaagagagacaaatatagcaatccat  18808700                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)                                 --------->PCF2                                <---------ARR14(2)                                --------->ARR14(2)                               <------ZmHOX2a(1)                          -------->P                          ------>MYB46(1)                          ------>MYB83         --------->AHL20(2)                          ---------- ---------ICU4          <---------MYB59      --------->AHL20(1)                     <---------------AGL15 --------YAB1        --------->ZAT18         --------->AHL20(2)                     --------------->AGL15 ----->YAB1         ----------->HVH21       --------->YAB1             <----------DOF2 <---------YAB1 -->TOE2(3)       --------->ANAC55(2)     --------->AHL20(2) <-----------GT1     <---------YAB1    --   aatcaatgcatagagacttcaagtgacctactaggatcccactaaaaaataatatgctgttttttgcctattccttttgcatcattcttgttatagtaaa  18808800                                                                                          -----------                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                                                        --------->bZIP60(2)                                                                                      --------->ANAC46                                                                                 --------->PCF2                                                                              ----------->HVH21    --             <---------TOE2(3)                                                <---------ATHB12     <-          --------->ICU4                                                   <------NtERF2--------->ANAC46   ---------->DOF2                                                       --------->RAP2.6(2)      --- ->GT1    <---------ATHB51                                            --------->DAG2  <---------ALFIN1 --------->GT1----------->GT1     --------->ATHB12----------->GT1    ---------->DOF2<---------ALFIN1   atggtaaaagaaattatggaaaataagaaaatggggtcattgaatgtcaagagggtaacattttcagacgataaggcgcaatgaccccacacctcacatg  18808900                               --------->CCA1(2)                              --------->ARR14(2)                              <---------ARR14(2)               <---------HSFB2a(2)                                                            -------               --------->HSFB2a(2)                                                       ============  <---------ZAT14        --------->ALFIN1                                         --------->ICU4   --  --------->ZAT14---------->DOF2                                           ---------->DOF2  --------- >HVH21       ======================================================================================= ------->At4g35610       <---------ANAC46                         <---------AHL20(2)     ============ --------At4g35610     --------->ALFIN1     ---------->DOF2       --------->AHL20(2)     <----------- ---->TEIL    ----------------->AG  ------->TEIL   --------->ATHB12   ---------->DOF2    ------------   aagctgcagtgccatttccaaaagagtgtgtggatatgaatttgaacaaagaaacattggtgatgaaattaaaaaagaaaaggaaagattactacaaagt  18809000  Previous    Next  AGI:  At2g45640.1    Description:  SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18); protein binding / transcription regulator. Identical to Histone deacetylase complex subunit SAP18 [Arabidopsis Thaliana] (GB:O64644;GB:Q0WTU2;GB:Q8L8K8); similar to P18 [Solanum chacoense] (GB:AAQ24533.1); contains InterPro domain Sin3 associated polypeptide p18 (InterPro:IPR010516); contains InterPro domain Histone deacetylase complex, SAP18 subunit (InterPro:IPR017250) Range:  from: 18806684    to: 18808457    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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