Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <----------DOF2                                          <------ZmHOX2a(2)                                         <---------ARR14(2)                                        <-                          <---------YAB1 --------->ARR11(3)                                        --                          --------->ICU4 <---------ARR11(3)                                     <----                        --------->YAB1   --------->ARR14(2)                             <-----------GT1                       <---------YAB1    <-----------ARR10                            --------->YAB1            --------->At4g35610   --------->ZAT6    <---------GLK1(2)                <---------ATHB51          <-----------RAV1(2)<---------YAB1------>ZmHOX2a(2)                       --------->WOX13(1) <---------ATHB12      --------->ICU4   <------ZmHOX2a(1)                        <---------ATHB12 <--   ccattcatggactcagaagaagttgatgatgatgaaacactaggatctttcttagattcttcgttgagaatagagctaaacgaatcaattatacctctga  18759700            --------->ANAC58            --------->ANAC46            --------->ANAC58       <-----------ARR10                                                                            -      <---------CCA1(2)           --------->YAB1                                                   -- --------ARR14(2)                 <---------ICU4                                                 ---- ------->ARR14(2)                <------ZmHOX2a(2)                                               ---- -----TOE2(3)            --------->AHL20(2)                                                    <----- ----ZmHOX2a(1)          <---------AHL20(2) --------->LBD16                      ----------->GT1 ----   ggaaactcatatctaagcaataaacaataaaatcgatcatcacttccgagtttaatcaaacaaaaaacaaaaaaacatcaagaaggcaaaattggtttca  18759800                                              --------->YAB1                                        <-------TEIL                                       --------->CCA1(2)                                       --------->ARR14(1)                                      --------->ARR11(1)                                      <---------ARR14(2)                                      --------->ARR14(2)                                     <---------HSFC1(2)                                     --------->HSFC1(2) ------>TEIL                         --------->HSFB2a(1) ------->ANAC46                      <---------HSFB2a(1) ----->ANAC46                       ----------->ARR10 ----->ANAC58                   --------->HSFB2a(2)             --------->TOE1(2) ------GT1                      <---------HSFB2a(2)          --------->ARR14(2)          --------->ARR11(3) ----->ANAC58                  <---------ETT(2)              <---------ARR14(2)          <---------ARR11(3)   cgcaccatgttgtgctcgtatatataactcatgtcgagaagattcgaatcaaaatcgaaatcaaatccagcgaattgaagaaatttgatgaaatcttatg  18759900                                          <---------WRKY12         --------->ANAC46                 <---------WRKY38(1)         --------->ANAC58               <--------ZAP1         --------->ANAC58           --------->MYB52(1)         <---------ANAC55(2)       ------->GAMYB      ------->GAMYB    --------->HSFB2a(1)      --------->ARR14(2)          <---------ALFIN1 <-----------GT1     <---------HSFB2a(1)      <---------ARR14(2)     ------>MYB46(1)    <----------DOF2        <---------HSFC1(2)     <---------GLK1(1)   *TSS------>MYB83--------->WRKY18(1)           --------->HSFC1(2) ----------->GT1      --------->MYB46(3)<-----------HVH21        ---------->DOF2    <----------DOF2   aactgggaaatacgcaaacgatgaacaaaccaaacaacacacggtcaagtctttaaccctctacgtagaaagaaggttctaatgggctttacaaggccta  18760000                                     --------->PCF5                                   <---------ATERF1(1)                             <---------AHL20(2)                           <---------AHL20(2)                                      --------->AHL20(2)                       <---------CCA1(1)                                        <---------AHL20(1)                      <---------ARR11(3)                                        --------->AHL20(1)                      --------->ARR11(3)                                        --------->AHL20(2)                     --------->YAB1------>NtERF2                         --------->At5g28300                    <---------ATHB12<------NtERF2                        <-------GAMYB              <                ------------>CBF  --------->ALFIN1          --------->YAB1<---------MYB52(1) --------     <---------AHL20(2)<---------RVE1(1)                   <------ZmHOX2a(2)   <---------AHL20(2)  <-   tacatatataatcttaggcccaatgatattttatcggtggcccagttttgttttgttttcgatcatcttcttcgccgttaaatattttattctctacggt  18760100                                --------->WRKY12                                --------->WRKY45                                                   --                                --------->WRKY38(1)                                               <--                      <---------ARR14(2)                                                         ----                      <---------GLK1(2)                                                          <---     ---------->ID1   --------->ARR14(2)                      --------->GLK1(2)                  <--- ----------DOF2      <---------At4g35610        ---------->DOF2                                  ---- ->ANAC46<----------DOF2    <---------YAB1      *TSS         <---------ARR11(3)                 ----- --------DAG2   <----------DOF2--------->DOF5.7(2)           --------->ARR11(3)             ---------   accttttgtctctttgtactttcagatactatcgttgacttcgaagtaagaaaagaaaatggagattttgacgagcatagctattacagtagcaacaacg  18760200                                                                                      --------->ANAC46                                                                        --------->CCA1(2)                                                      <---------ATHB12  --------->GLK1(1)                                                    --------->GLK1(1)  --------->ARR11(3)                                                --------->LBD16        <---------ARR11(3)       <---------MYB52(1)                 <----------DOF2              --------->ARR14(2) ---->ZmHOX2a(2)                         <---------ICU4                --------->ARR11(1)       ----- ----ZmHOX2a(2)                        <-----------ARR10      <----------ID1          --------->ANAC58 ----->ARR11(3)                        --------->GLK1(2)    --------->MYB52(1)        --------->ANAC58 ------ARR11(3)                        <---------ARR11(3)--------->ANAC58           <---------ANAC58 ------ARR14(2)                       <---------GLK1(2)  --------->ANAC58           <---------ANAC58 ----->ARR14(2)                    --------->YAB1--------->LBD16       <---------ARR14(2)       <---- -->GAMYB        <-----------GT1--------->YAB1 <---------LBD16--------->ANAC58     --------->ZAT14  < >MYB46(3)<---------ANAC46     <---------YAB1 <---------LBD16 --------->ANAC58     <---------ZAT18  -   atcttcatcgttttgtgtttcactatctatcttatgatcagaatctttaccgggaaatcaagaaacgacaagagatatgctccagtgcatgccacggtct  18760300                                                             ------>NtERF2                                                             <---------RAP2.6(3)                                                            --------->RAP2.6(2)                 <----                                                            --------->DEAR3(1)                 <-----                --------->DEAR3(1)                         --------->DEAR3(2)                  ------  ------>ZmHOX2a(2)                           ------>ZmHOX2a(2)                     ================= ---------------->WRI1                       <------ZmHOX2a(2)                      ================= ------DOF2<---------ALFIN1       --------->ANAC55(2)     --------->At4g35610       <------ZmHOX2a(1) ---------ARR11(3)                <---------ANAC55(2)    --------->GLK1(2)         ----------->HVH21 -------->ARR11(3)   ----------->GT1        --------->ARR11(3)                     --------->ANAC46 <   ttgatcttctcttccacagcgacgagttatacgattacgagacagagatcgcgagagagaagccgacttacaggtttttgagtccaggacagagcgagat  18760400                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                    --------->ALFIN1                                                       ------>ZmHOX2a(2)                  <---------bZIP60(2)                                                      ==========                  <---------O2                                                            ===========                  <---------ANAC46                                                        <------ZmHOX2a(2)                  <---------ANAC58                                                        --------->HSFB2a(1)            ------>ZmHOX2a(1)                                                             --------->GLK1(1)          ------>ZmHOX2a(2)                                                              <---------ARR14(3)         <------ZmHOX2a(2)                                                               --------->ARR14(3)        <-----------ARR10                                                                <---------ARR11(3)        <---------ARR14(2)                                                               --------->ARR11(3)        --------->AGP1                                                                   <---------ARR14(2)        --------->ARR14(2)                  <-------TEIL                                 --------->ARR14(2)        --------->ARR14(3)                 --------->CCA1(2)                             <-----------ARR10        <---------ARR11(3)                <---------GLK1(2)                              <---------ARR11(1)        <---------GLK1(2)                 --------->ARR11(1)                            <---------ARR14(1)        --------->ARR11(3)  --------->ARR14(2)                                          <------NtERF2        <---------ARR14(3)  <---------GLK1(2)                                           <---------CCA1(2)       <---------GLK1(1)    <---------ARR14(2)                                        <---------ANAC58       <---------At4g35610<---------KAN4(2)--------->ARR14(1)                         <---------ANAC46      ----------->ARR10<---------ANAC46   <---------ARR14(2)                          <---------ANAC58 -----RVE1(1)--------->TOE2(1)            --------->ARR14(2)                         <---------LBD16 ----ARR11(3)--------->TOE1(1)          ----------->ARR10     <------ZmHOX2a(1) <---------ARR14(2)=== --->ARR11(3)--------->ANAC46      --------->ANAC58           ====================================HOX2a_HOX2a ================HOX2a_HOX2a--------->KAN4(2)                 ===================================HOX2a_HOX2a ===============HOX2a_HOX2a<----------TaMYB80             ---------->DOF2       --------->ARR14(2)=== -----------GT1   <---------ANAC58 --------->ANAC58    --------->YAB1           --------->GLK1(2) <--   attaactgcagatcctcgtaacgtggagcatattctcaagacaagattcgataactatagtaaaggacacagtagtagagagaatatggcggatcttcta  18760500         <----------DOF2        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      --------->ARR11(3)      --------->ARR14(2)      <---------ARR11(3)      <---------ARR14(2) --------->TOE1(2) ----HSFB2a(2)                                   <----------DOF2 --->HSFB2a(2)                                 --------->HSFC1(2) --->HSFC1(1)                                  --------->HSFB2a(1) ----HSFC1(1)                                  <---------HSFB2a(1) ====HOX2a_HOX2a                               <---------HSFC1(2)                          --------->At4g35610 ====HOX2a_HOX2a                            <------ZmHOX2a(1)                              <---------At4g35610 ==============HOX2a_HOX2a              ------->GAMYB                                --------->ARR11(3) =============HOX2a_HOX2a            ----------->RAV1(1)                             <---------ARR11(3) ----ZmHOX2a(1)<-------GAMYB         --------->MYB52(1)  <----------DOF2            <---------RVE1(1)   ggacatgggatctttgctgttgatggagagaaatggagacaacagaggaagctttcgagctttgagttctctactagagttttaagagattttagctgct  18760600  Previous    Next  AGI:  At2g45500.1    Description:  ATP binding. similar to ATPase [Arabidopsis thaliana] (TAIR:AT3G27120.1); similar to Tobacco mosaic virus helicase domain-binding protein [Nicotiana tabacum] (GB:AAL25088.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain MIT (InterPro:IPR007330); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 18756872    to: 18759925    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g45510.1    Description:  CYP704A2 (cytochrome P450, family 704, subfamily A, polypeptide 2); oxygen binding. similar to CYP704A1 (cytochrome P450, family 704, subfamily A, polypeptide 1), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G44890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24404.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 18760148    to: 18762246    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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