Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->TGA1a                                           <---------TGA1a                                           --------->O2                                  --------->YAB1                                 <---------YAB1                              <---------AHL20(2)                             --------->AHL20(1)                             <---------AHL20(2)                 --------->HSFB2a(2)=================bZIP_DOF                 <---------HSFB2a(2)---------->DOF2                                                --          <---------MYB52(1) --------->AHL20(2)                                             <--------         <-------GAMYB --------->YAB1      <---------O2     --------->AHL20(2)              ---------         <-----------HVH21   <---------AHL20(1)    <---------MYB52(1)             --------->AHL20(2)         ============================================MYC_MYB<---------AHL20(2)----------->GT1 -------      <---------At5g28300 --------->AHL20(2) ----------->HVH21         ----------->GT1----------->GT1   ttatgttctaccgttacatcgagaaacataatataatgaaaagactcgtgactgtttgctaaaaaaataagactcgtgaattgataaaatgtaattaaaa  18734200                        ------>MYB46(1)                        ------>MYB83                   --------->YAB1             <---------ARR14(2)   <-------TEIL       <---------MYB111(1)              <---------ICU4         <---------ICU4   --------->SPL7  <---------ALFIN1                   --------->ICU4      <---------AHL20(2) ------------->AtSPL3 --------->AtMYB61             --------->YAB1        --------->AHL20(2)      <-- -AHL20(2)       ------->TEIL         <---------ARR14(2)            <---------AHL20(2)------>ZmHOX2a(1) >AHL20(2)   --------------->AtSPL8   --------->ARR14(2)    --------->At4g35610   --------->ARR14(2) --->DOF2<---------TOE2(3)       --------->AtLEC2  <-------TEIL<-------TEIL  --------->ICU4      ----   gaccgtacattaaggcatgtaccacctacaaaatcatgcatatatgcatcagtttcatcatgagcttcatttttttttaattagtatcctttgatcagat  18734300                                         --------->ATHB12                                        <---------YAB1                                        --------->ICU4                                       <---------TOE2(3)                                      --------->YAB1                                     <---------YAB1                                    --------->AHL20(1)      ------->TEIL                                    --------->AHL20(2)   --------->ANAC58                          <---------ANAC58               --------->ANAC58                          <---------ANAC58               <---------ANAC55(2)                    <----             --------->ZAT18        <---------AHL20(2)   --------->ANAC46                   ---------             <---------ZAT18        <---------AHL20(1)   --------->ANAC55(2)                <-------- -------AHL20(2)          <---------ANAC46               --------->ANAC55(1)                <-------- ----->AHL20(2)  <----------DOF2   --------->YAB1<---------AHL20(2)               --------->TOE2(3)   ttaatataagactcgtgcgcttcaatttgtgtgtccattataatgtttgatataatctcacgcatccatggactatctagtaaacctcatccaatatttt  18734400                                                                          --------->ANAC46                                                                        <-----------GT1                                                                       <---------YAB1                                                                     -------->ATHB1                                                                     <---------ICU4                                                                     --------->ATHB51                                                   --------->ANAC58 <---------YAB1            <------                                                   --------->ANAC58 --------->AHL20(1)        <------                    --------->TOE2(3)     ---------->DOF2           --------->ICU4  ---------->DOF2        ---------->DOF2                  --------->AHL20(2)         <---------AHL20(2)        ------- -----YAB1          --------->TOE1(3)    <---------AHL20(2)         --------->AHL20(2)  ----------->GT1 >AHL20(1)       <-----------GT1      <---------------AGL15   ------->GAMYB      --------->MYB52(1) -ARR11(3)<----------ID1              --------->WOX13(1)    --------->At4g35610 ------->GAMYB ------- -AHL20(1)----------->GT1             --------------->AGL15--------->MYB52(1)  <---------MYB52(2)   -   catagactaaaaaagaaaaaaaccttatacttcaaattttcaattaaagggagacgaaacacaactgaaaattattacacaactaacaaagagaaatatt  18734500                                                   --------->ANAC46                                                   <---------ALFIN1                                                 --------->ANAC46                                                 <---------ALFIN1                                               <---------ALFIN1                                               ----------->RAV1(1)                                              --------->MYB46(3)                                            <---------TCP15(1)                                            --------->PCF2         --------->ANAC58                        ---------->DOF2    <------ZmHOX2a(1)       --------->ANAC58                     ----------->RAV1(1)  <------MYB83           <---------ALFIN1        --------->AHL20(1)                <------MYB46(1)       <---------SPL7        <---------AHL20(2)               --------->MYB59        <------NtERF2        --------->AHL20(2)            <------MYB83<---------MYB55(2)       --------->AHL20(2)             <------MYB46(1)  ------>NtERF2 ---ARR11(3)        --------->RAP2.3(3) <--------P--------->MYB46(3)                              --- ---AHL20(1)        --------->ZAT18  --------->MYB111(1)      --------->ANAC46             -------->P -->ARR11(3)        <---------ZAT18  --------->MYB59 --------->DEAR3(2)                   --------->MYB52(1) -->AHL20(1)      <---------ZAT18    --------->MYB46(2)--------->ABI4(1)                <---------MYB52(2) --------->DOF2   --------->PCF2    <---------MYB55(1)--------->DEAR3(1)           --------->AtMYB61<   tttaaagaaaaaaattgtagagcccacaaagtgatgcagtaggtaggacccacacaccgcccatgcggcacgctgtctatctaaaccaaaactaacccat  18734600                                           --------->TOE2(3)                                      <---------MYB59                                      <---------MYB46(2)                              ------>ZmHOX2a(1)                           ------>ZmHOX2a(1)                          <---------ALFIN1 --------->TOE1(3)                    --------->REM1(1)   -     --------->YAB1     ------>ZmHOX2a(1) --------->ZAT6                       <-------TEIL         - <---------ICU4        <---------ALFIN1 ------>MYB46(1)                    --------->ANAC58         < ------>YAB1  --------->TOE2(3)    *TSS ------>MYB83            ------>ZmHOX2a(1)                   < ---------YAB1--------->TOE1(3)   ----------->HVH21  <---------CCA1(2)     --------->ANAC58    <-----   tcatcattcatcttaaccttaacctcctcctcctctctgacctaaccctaaacccatctctctctccttcttcttacaagcttcatctacatgtattact  18734700             <---------ANAC58             <---------ANAC58                                                              --------->AHL20(2)   --------->ZAT2                                                                          <---------AHL20(2)   <---------ZAT2                                                                         <---------AHL20(2)   --------->At4g35610                                                                    <---------AHL20(1)   <---------At4g35610                                                          ------>ZmHOX2a(1) -------->ZAT14                                                                --------->TOE2(3) -------->ZAT18                                                           <-----------GT1 --------->AHL20(2) ---------ZAT14                          <-----------GT1             <---------RVE1(1) <---------AHL20(2) ---------ZAT18          ------->TEIL   <-----------GT1             --------->ARR11(3)<---------AHL20(2) ----YAB1    <---------ANAC46   <----------DOF2                     <---------GLK1(2) --------->AHL20(2)   agtgcagctccagtttcgtcttacatgtatatgacttttgtattacccttctcttaatttctctacttcagatttttttctccttagattaatttaattg  18734800                       --------->ARR11(3)                       <---------GLK1(2)                     ----------->ARR10    <---------ANAC46                     <---------TOE2(3)    <---------ANAC58                --------->ANAC58      --------->At4g35610                xxxxxxxxxxxxxxxx>smallRNA(i) <---------MYB46(3)                --------->ANAC58      <---------At4g35610  <---------------AtSPL3              <-------GAMYB                        <---------TOE1(3)<--------  <---------------AtSPL8         <---------ANAC46        <------ZmHOX2a(1) <---------TOE2(3)<--------  --------------->AtSPL8--------->GLK1(2) <---------ANAC58       <-----------GT1         <-----------GT1   agttattgtacatccctcaagctaagattctggttttgtgagttgagtggatgagaagaggagagattaactaaattagggtttcaattgtttacttttt  18734900                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                               <---------ALFIN1                                                                              --------->MYB46(3)                                                                  ------>ZmHOX2a(2)                                                                 --------->GLK1(1)                                                                 <------ZmHOX2a(2)                                                                --------->ARR11(3)              --------->ANAC58                                  --------->ARR14(2)              --------->ANAC55(2)                               <---------ARR11(3)   <---------DAG2--------->MYB52(1)               <----------DOF2<---------GLK1(1)   --------------->AGL15                         <---------DAG2 <---------ARR14(2)   <----------DOF2     <------ZmHOX2a(2)      <---------ALFIN1  --------->ARR14(3)  <---------ANAC58     ============================HOX2a_HOX2a <---------GLK1(1) --------->ANAC58  <---------ANAC58    <-----------HVH21     =============================HOX2a_HOX2a --DOF2       --------->ANAC58              ============================HOX2a_HOX2a -DAG2        <---------ANAC55(2)           ------>ZmHOX2a(1)  --------->GLK1(1) <---------ALFIN1 ---   gtttgctttttatatcaagtaatggatcaggtctctcgctctcttcctccaccttttctctcaagagatctccatcttcacccacaccatcaattccagc  18735000               ----------->RAV1(1)             --------->At4g35610            --------->RAP2.6(2)          --------->ZAT2          --------->At4g35610          <---------At4g35610                           <---------ZAT18         ----------->RAV1(1)                           --------->ALFIN1       --------->ZAT2                             --------->ARR14(2)       <---------At4g35610                        --------->GLK1(2)       --------->At4g35610                    --------->ANAC58      ----------->RAV1(1)                     --------->ANAC58    <---------At4g35610                     <---------ALFIN1    --------->ZAT2                         --------->ZAT2    --------->At4g35610        --------->ANAC58   <---------ARR14(2)              --------->GLK1(1)   ----------->RAV1(1)  <---------At5g28300<---------ABI4(2)                --------->GLK1(2) <---------At4g35610   --------->MYB52(1) --------->ANAC58         ----------->HVH21           ------ --------->At4g35610<---------GLK1(2)     --------->ANAC58       <---------ANAC55(2)          ------- ------>At4g35610 ------->GAMYB--------->ANAC58--------->DEAR3(1)--------->ANAC55(2)    <------ZmHOX2a(2)   atcagcagcagcagcagcaacagaatcacggccacgatatagaccagcaccgaatcggtgggctaaaacgtgaccgagatgctgatatcgatcccaacga  18735100  Previous    Next  AGI:  At2g45430.1    Description:  DNA-binding protein-related. similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT3G60870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81187.1); contains InterPro domain Predicted AT-hook DNA-binding (InterPro:IPR014476); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175) Range:  from: 18734635    to: 18736009    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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