Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->AHL20(2)                            <--                                                 <---------TOE2(3)                              <----                                                ---------->DOF2                                 -----                                              <---------YAB1                                  <------         <---------YAB1                      --------->TOE2(3)                                -------    <---------ANAC46                        --------->YAB1                                 ------->TEIL    <---------ANAC58                        -------->ATHB1                         --------->ANAC55(1)    <---------ANAC58                        <--------HAHB4                         --------->bZIP60(2)   ---------->ID1                           <---------ICU4                         --------->ANAC58 ---------DOF2           <---------AHL20(2) --------->ATHB12                       --------->ANAC58 - -ANAC55(2)             --------->AHL20(2) --------->ICU4                       <---------REM1(2) --- >ANAC55(2)        --------->AHL20(2)      <---------ATHB12     --------->ARR11(3) --------->ANAC46 <   gcttttgcgtttttattccgataatataaaattttgaaaaatcgaatcattaaagaaaataactaagaactggcattttgtatacacgccatgtatatat  18725000     <-----------GT1 -------AHL20(2) -----AHL20(2) ---->AHL20(2)         <-----------GT1 ---AHL20(2)   <---------YAB1 -->AHL20(2)<---------AHL20(2)----------->GT1 -------->AHL20(2)  <---------ICU4                                       --------->ANAC58 ------>AHL20(2)    ----------->GT1                                      --------->ANAC58 ---------AHL20(2)  --------->YAB1         <---------ZAT6 <---------AHL20(2)   atatatataactattttatcaatagttacaaattgtaaaattttagtgtttgatggctaatttaagttggacctcaagtcaatagtttaaaaactatgcc  18725100                           <---------AHL20(1)                           --------->AHL20(2)                         --------->ARR11(3)                        --------->AHL20(1)                            <---------ARR11(3)                        --------->AHL20(2)                           --------->GLK1(1)                        <---------AHL20(1)                           <---------RVE1(1)                      <---------AHL20(1)                             <---------GLK1(1)                      <---------AHL20(2)                             --------->RVE1(1)                     --------->YAB1                                 <---------ARR11(3)  <---------ZAT14                ----------->GT1                                     --------->ARR11(3)  <---------ZAT18              <---------TOE2(3)                              <-------TEIL               --------->ZAT14              <---------TOE1(3)       <-----------GT1    <---------AHL20(2)        <---------At5g28300             --------->MYB52(1) <---------AHL20(2)       --------->AHL20(2)       --------->YAB1        --------->AHL20(2) <---------AHL20(2)           --------->AHL20(2)     <---------ICU4      --------->TOE2(3) <---------AHL20(2)              <---------AHL20(2)  ----------->RAV1(1) -----   aaaaaaaaacttaattaagggtataatattttatttcatttatccatcttgttcgtaattaaattcatgagatatctccaacaattacagttcacatgta  18725200                                                                                   <---------ANAC55(2)                                                                             --------->ARR11(3)                   --------->ANAC58  <---------ANAC58            --------->ARR11(3)--------->ANAC55(2)     --------->At5g28300             <---------ANAC46            <---------ARR11(3)<------MYB46(1)    ----------->GT1--------->ANAC58  <---------ANAC58        --------->ANAC55(2)   <------MYB83   --------->ZAT6---------->DOF2  <<<<<<<<<<GT-3b            <---------ANAC55(2)  --------->MYB59  <- -->TEIL   ---------->DOF2----------->GT1                  <-----------GT1   <---------ARR11(3)   <--   tattcacagtaaataaagagaaagcaagaagtttatttttcttggaaaatagttttttttatcacgagatgttccaagggatattaggtaatcaaacgat  18725300                                   --------->YAB1                                  <---------AHL20(2)                                  <---------YAB1                                 <---------AHL20(1)          ---------->ID1         <---------AHL20(2)                                              ----          <-----------GT1    <---------AHL20(2)---------->DOF2                                   ----         <-----------GT1   --------->YAB1  ----------->GT1        --------->YAB1            <--------     <----------DOF2   --------->YAB1--------->ICU4            --------->YAB1               <--------     <---------DAG2   <-------TEIL--------->AHL20(2)       ---------->DOF2           <---------TOE1(2)    <---------DAG2<---------YAB1 --------->AHL20(1)  ----------->GT1                 <---------TOE2(2) ----------GT1 <----------DOF2   --------->AHL20(2)<---------GLK1(2)         <---------ANAC58    ---- ---------GT1------>ZmHOX2a(1)--------->AHL20(2)   <------------CBF          <---------ANAC58    ----   tttcccccttttttcctcttttgattcataaataatataattatgtagttaaagattgtgaaaaagaataatagaagaggcttatcgcatgtttgcttca  18725400 --------->ANAC58                                                     <---------ANAC58 --------->ANAC58                                      <---------MYB52(1) ----->ANAC46                                      --------------------->WRI1  ---------->DOF2 ----->ANAC58                               <---------MYB52(1)        <---------ANAC58 -ANAC58                                  ------>ZmHOX2a(2)           <---------ANAC46 -ANAC58                 ----------->GT1 <------ZmHOX2a(2)           <---------DEAR3(2) ----->AtLEC2         *TSS              --------->ARR11(3)         <------NtERF2               ------ ----->ANAC58        ---------->DOF2    <---------ARR11(3)  <----------DOF2 <----------DOF2    <-----   cgcaaacaactaaatgtgagagaaaaagagaaaatagagagagatcgttttttttttgttagctttgtcgtcgcttggctttaaagactttcttctctat  18725500                                                       ------>ZmHOX2a(1)                                                 --------->HSFB2a(1)                                                --------->ARR11(3)               --------->TOE1(3)                --------->ARR14(2)               --------->TOE2(3)                <---------ARR11(3)               <---------GLK1(2)            ------>MYB83                        <---------ARR14(2)            --------->YAB1            ------>MYB46(1)                     <-----------ARR10           ------>MYB83    ------>ZmHOX2a(1) <-----------GT1   <---------MYB52(1)                  ------>MYB46(1) --->ZAT14<---------MYB59 ------>ZmHOX2a(1)    <---------CCA1(2)          <---------MYB59        ---- ----ZAT14<---------MYB46(2)            <---------CCA1(2)                 <---------MYB46(2)   <-----   actctcctcttaccaaaccctaattctcctctcttgattcccgtttctcaaatcttcctctcatcttcaaacaataccaaacataatctccatattttta  18725600                                                                 <---------ANAC46                                                              <---------AtMYB61                                                              --------->ATERF1(1)                                                              <---------RAP2.6(2)                                                              --------->ALFIN1                                                              ----------->HVH21                                                            <---------ANAC58                                                            <---------ANAC58                                                            --------->ALFIN1                        <                                                           <---------MYB46(3)                       <                                                           <---------DEAR3(1)     <---------ANAC46  -                                                           --------->MYB55(2)   --------->MYB55(2)  <                           --------->ALFIN1               <---------ANAC46     --------->ALFIN1     <                   --------->ANAC46                 --------->ATHB12 --------->WRKY18(1)            =                   --------->ANAC58                 --------->MYB52(2)         <---------AtMYB61    <                 ---------->DOF2                  <---------MYB52(1)<-----------HVH21        <-------                 --------->MYB52(1)             ----------->GT1 <------NtERF2  <---------DEAR3(1)   <    ----------->GT1--------->ANAC58        --------->MYB46(3)--------->ATERF1(1)<---------MYB46(3)<-- ----->ANAC46 --------->TOE1(3)          <-----------GT1 <---------ANAC46   <---------DEAR3(1)    --- ------GT1    --------->TOE2(3)       ----------->GT1   <---------LBD16    --------->At4g35610<------   ctcaacaagtttaaaaccctaacgcaagagtggggagatagagtaacaactcgttaattggggggtggccggtcatgagcggtggtgggaacacaatcac  18725700                                                                           --------->ALFIN1                                                                         --------->MYB55(2)                                                                         <---------MYB46(3)                                                                        --------->ALFIN1                                                                        <---------DEAR3(1)                                                                        <---------AtMYB61            <---------AtMYB61                                        --------->ALFIN1            <---------DEAR3(1)                                       <---------DEAR3(1)           <------NtERF2--------->ALFIN1                             <---------AtMYB61         <---------DEAR3(1)                                        --------->MYB55(2)         <---------ANAC46                                         --------->ALFIN1        --------->ATERF1(1)                                       <---------DEAR3(1)       <---------ATERF1(1) --------->ALFIN1                       <---------AtMYB61      <---------DEAR3(1)<-----------RAV1(1)                      <---------ABI4(1)  --------->ALFIN1      <---------AtMYB61                        <------NtERF2 --------->LBD16    <-------GAMYB     <---------ZAT14            <-------GAMYB<---------PCF2 ---------TGA1a--------->ALFIN1       <------NtERF2            <---------ANAC46 ---------O2--------->ALFIN1          --------->ZAT2           <---------DEAR3(1)        <---------ANAC58 -------->TGA1a<---------DEAR3(1)     <---------At4g35610      <---------RAP2.6(2)       <---------ANAC58 ---------ANAC58   <---------MYB46(3) --------->At4g35610      <---------DREB2C(2)  <-----------RAV1(1) ---------bZIP60(2)--------->MYB55(2) <---------ZAT2 <------ZmHOX2a(1)<---------MYB46(3) <---------ANAC46 ===========================MYC_MYB  ----------->RAV1(1)       <---------ANAC58     --------->ALFIN1 ---------ANAC58  <---------AtMYB61--------->ATERF1(1)         <---------DEAR4(1)  <-------MYC3 --ATHB12--------->ALFIN1<---------ANAC46    <---------ANAC46  <---------ANAC58    ------->MYC3 ---------ANAC46<---------MYB46(3) <------NtERF2--------->ALFIN1<---------MYB46(3)--------->O2 -------ZAT14  <---------AtMYB61<------ZmHOX2a(1) <------ZmHOX2a(1)<---------MYB46(3)   <---------MYB46(3) ------>ZAT14<---------ZAT2<---------ANAC46<---------MYB46(3) <---------ABI4(1)   <---------O2 ---ICU4<------NtERF2 <---------MYB46(3)  --------->ALFIN1  --------->ALFIN1 ----------->TCP11(1)   tgccgtgggaggcggaggtggtggttgtggtggaggaggcagcagtgggggaggaggaagtagtggcggtggtggtggtgggccatgtggtgcttgtaag  18725800                                                                                     --------->DAG2                                                                                    ---------->DOF2                                                                                <-------TEIL                                                                              --------->At5g28300                                                                             <---------ORA47(2)                                                                             <---------DEAR4(2)                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                                                                            --------->ALFIN1                                                                           <------NtERF2                                                                           <---------ABI4(1)                                                                           ------>NtERF2                                                                           --------->ATERF1(1)                                                                          <---------RAP2.3(1)                     <------NtERF2                                        <---------RRTF1(1)                    --------->LBD16                                      <---------DEAR3(1)                   <---------ANAC46                                      <---------RAP2.6(2)                   <---------LBD16                           ------>ZmHOX2a(2)<------NtERF2                  <---------LBD16                          <---------ARR14(2)<---------DEAR3(2)              --------->ALFIN1                          --------->ANAC58 <---------RAP2.3(2)              <---------ANAC58                       <---------ZAT2      <---------RAP2.3(3)              <---------ANAC58        --------->ZAT14--------->ZAT2      <---------RRTF1(3)            --------->ALFIN1         --------->DEAR3(1) --------->ANAC58 <---------RRTF1(2)        <------ZmHOX2a(1)  ------->TEIL             --------->ANAC46    <---------LBD16     <------ZmHOX2a(1)  ----------->GT1   <----------DOF2  --------->ARR14(2)<---------MYB46(3)     <   <---------TOE2(3)------>NtERF2 <-----------GT1  --------->LBD16     <-----------RAV1(1)      -----   tttctaaggaggaagtgtgtgccgggatgtatatttgcaccgtactttgactccgagcaaggatcggcttattttgcggcggtgcataaagtgttcggag  18725900  Previous    Next  AGI:  At2g45420.1    Description:  LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18). Identical to LOB domain-containing protein 18 (LBD18) [Arabidopsis Thaliana] (GB:O22131;GB:Q1ECL8;GB:Q8W1D7); similar to JLO/LBD30 (JAGGED LATERAL ORGANS) [Arabidopsis thaliana] (TAIR:AT4G00220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24488.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883); contains InterPro domain Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394) Range:  from: 18725422    to: 18727803    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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