Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->TOE2(3)       --------->ANAC58           --------->TOE1(3)    <-------TEIL           <---------MYB59     --------->CCA1(2) <---------ANAC58             <---------ARR14(2)                       ---------->DOF2 <---------ANAC46   <---------ALFIN1     <---------ATHB12             --------->AtMYB61 <---------ANAC58   ------->GAMYB  --------->ANAC58            --------->ARR14(2)                   - ------>RAV1(2)    --------->MYB46(3)  --------->WOX13(1)      <---------ARR14(2)                   < ---->At4g35610   -------->P  --------->ARR14(2) --------->GLK1(2)<---------ETT(1)                  - --->ARR11(3)   --------->MYB46(3) --------->ANAC46           <---------GLK1(1)                  <---   ctggcgtgataaacctaaacaaccacatttcagatacaagccaatcaaacaattctgtagaaacaaatccgaccaaagtccagtttttttcaaaaaccca  18703300                                      --------->ANAC58                                      --------->ANAC46                                      --------->ANAC58                       <---------GLK1(1)                                    <---------ALFIN1                         --------->GLK1(1)                           ------>MYB46(1)                                  --------->ARR14(2)                           ------>MYB83                                  --------->ANAC46           ------>ZmHOX2a(1)    --------->TOE1(1)                        --------->ANAC58 ------>TEIL               --------->MYB52(1)        ----------->HVH21   --------->ANAC58 ---------ARR14(2)       <---------MYB59 <----------DOF2        --------->GLK1(2) -------->ARR14(2)       --------->AtMYB61         <---------ANAC55(2)  <---------LBD16--------->HSFB2a(2) ------ATHB12 <----------DOF2 --------->TOE2(3)    --------->ANAC55(2)--------->ETT(2) <---------HSFB2a(2)   tgaatctgcattcctccttttacaaaacctaacctcgaacacgctttaagaacaagtgacagtgagaatttgtccacggaaaccccattctcgagcatca  18703400                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                           ------>ZmHOX2a(2)                     --------->YAB1<---------ALFIN1                          <------ZmHOX2a(2)                   <---------HSFB2a(2) <---------ALFIN1                         <---------ARR14(2)                   --------->HSFB2a(2) --------->AtMYB61                         --------->ARR14(2)               <---------SPL7     ------>ZmHOX2a(1)                     <---------LBD16                     <---------ANAC58 <------ZmHOX2a(2)               <---------ANAC58                          <---------ANAC58--------->ARR14(2)               <---------ANAC58                       --------->ANAC46   ------->TEIL             --------->ARR11(3)          ----------------------->TaNAC69(2)------>ZmHOX2a(2)         --------->At4g35610 ------>ZmHOX2a(1)       <---------LBD16     <---------ARR14(2)         -   aacagagcaagagcagagcttgtctcggatcctttccatgagagtgagacttgatcacggcgttccataaaaatggatcctccacctctccaaatgaaaa  18703500                                                    --------->TGA1a                                                    <---------TGA1a                                                    ==========================bZIP_DOF                                                   --------->SPL7                                                   ------->TEIL                                               <-------TEIL                                              --------->ARR14(1)                                             --------->ARR14(2)     <---------ANAC55(2)            --------->ARR14(2)  <---------HSFB2a(2)     <---------ANAC55(1)           <---------ARR14(2)   --------->HSFB2a(2)     <---------ANAC58           --------->ANAC58--------->ANAC58     --------->ANAC46           --------->ANAC58--------->ANAC58     <---------ANAC58          --------->LBD16--------->CCA1(2)                     --------->TOE1(1)     --------->ANAC55(2)     ------->GAMYB   <---------ARR14(2)              <---------KAN4(1)    <-------TEIL             =================================MYC_MYB--------->ANAC58  --------->TOE2(2)       ---------->DOF2    --------->ARR11(1)      --------->ANAC58      ----------  --------->TOE1(2)       ====================================bZIP_DOF       --------->KAN4(1)------- ------>TEIL           --------->ANAC46    ----------->ARR10       ---------->DOF2 ------>ZmHOX2a(1)   cgaacatacgtgatactcgtggaagacacaacgcgcgaaatcggcgagatacggacgtcgagaagaggcaaaagccagaacaatcctcgtagtgagattt  18703600                                                   --------->At4g35610                                                   ----------->RAV1(2)                                                   <---------At4g35610                                                --------->TGA2(2)                                               <-----------HVH21                                              --------->ANAC55(1)                                              --------->ANAC58                                              --------->ANAC46                                              --------->bZIP60(2)                                              <---------bZIP60(1)                                              <---------O2                                              --------->TGA1a                                              --------->ANAC58                                              --------->bZIP60(1)                                              <---------TGA1a                                              <---------ANAC55(2)                                    <---------ARR14(2)                                    --------->ARR14(2)                                --------->LBD16<-----------TGA1                                <-------PIF5  --------->ANAC55(2)                                ------->PIF5  --------->O2                    <---------YAB1                           =============================MYC_MYB           <------ZmHOX2a(1)         --------->KAN4(2) ------->GAMYB<------MYB83             <---------At4g35610               --       <---------YAB1     --------->MYB46(3) <-----------STF1    --------->ZAT2                    -- ->ARR10<---------ICU4  --------->WOX13(1)  <---------DOF5.7(2)  <---------ZAT2--------->ATHB12    <- -->CCA1(2)           <---------ATHB12  <------MYB46(1)          --------->At4g35610  <---------MYB46(3)   gagtttttgatgattcccgtcttaatcaatcgcccgtggatttggttcacgtcatctgaagttttgcagcttccaaggacatgaatggtggatgaaatcg  18703700           <---------WRKY18(1)          --------->WRKY12           <---------ANAC55(2)          ----------->GT1         <---------WOX13(1)          <---------ANAC58         <---------ARR14(2)       --------->ATHB12              --------->ANAC55(2)      <------------CBF       <---------MYB46(3)            <---------ANAC58         --------->ARR14(2)     --------->MYB52(1) --------->ANAC58                  <-----------GT1        <---------LBD16            <-----------GT1 --------->ANAC46               <---------ICU4           ------->TEIL       --------->YAB1 --------->ANAC58              <---------MYB52(1)   --------->At4g35610  --------->YAB1      <------- ------->ZAT6            --------->YAB1             <---------At4g35610 <---------YAB1--------->RAP2.6(3) ------->HSFB2a(1)     --------->ANAC58       <-------GAMYB --------->LBD16<---------YAB1  <--------- --------ALFIN1        --------->ANAC58      <-----------RAV1(1)  <---------ANAC46<----------DOF2   aacactccatggttgacttgaagacaagcatcagttattacgttcttctgttggagatgaaccggattgggtttattatcatcgttttaacggctatgtg  18703800                                                                                   --------->YAB1                                                                                  <---------YAB1                                                                                 --------->AHL20(1)                                                                                 --------->AHL20(2)                                     ------->TEIL                               <---------ICU4                                     <---------ARR14(2)                     --------->AHL20(2)                                     --------->ARR14(2)                   --------->YAB1                          ------>NtERF2                                  <---------ATHB51        <---------At4g35610<------NtERF2                                 <---------ATHB12    <----------CDC5      --------->DEAR3(1)     ---------->DOF2      ------------>CBF     -----------   --------->At4g35610--------->ANAC46<---------At4g35610  --------->AHL20(2)<---------AHL20(2) ----- --ANAC46      ----------->GT1      <---------CCA1(2)      <---------AHL20(2)<---------ICU4    ------ -DOF2  --------->At4g35610<---------MYB52(1) ----------->TBP   ---------->DOF2--------->ICU4  ------   gaagtcgctgagcggatgagttaaacgccgtcgtttttgtatctgcctataaaagggctcttaaattaaggcccaataataaatattataagcccaatct  18703900 --------->ARR14(2) <---------ARR14(2)      <---------ZAT14 <---------ARR11(3)      --------->At4g35610 --------->ARR11(3)      --------->ZAT14 <-----------ARR10    ---------->DOF2 ->CBF          <-----------GT1                                                                <----- ------->CBF <---------GLK1(2)                                                       --------->TOE1(2) --->TOE2(3) --------->ARR11(3)                                  <-----------GT1   <---------TOE2(3) --->YAB1    <---------ARR11(3)                 --------->ANAC46--------->AHL20(2)--------->MYB52(1)   caatatctgtccaaagattttccaaacagcagtgaaactgaaacatttacccaaaacaaaatggaattaactattaagtcagactaacgttcgaatttag  18704000                                    <---------AHL20(2)                 ------>ZmHOX2a(2)                                 ------>ZmHOX2a(2)                   --------->ARR11(3)                                <------ZmHOX2a(2)                    <---------ARR11(3)                               <---------ARR11(3)               ------>MYB46(1)                               --------->ARR11(3)               -------->P                          <                               <---------AGP1                   ------>MYB83         <---------AHL20(1)          <---------YAB1       --------->ARR14(2)              ----------->RAV1(1)--------->AHL20(2)-     ----------->GT1           <---------ARR14(2)         <---------YAB1     <------ZmHOX2a(1)    --- ----TOE2(3)                  <---------CCA1(2)         <---------ICU4 =============HOX2a_HOX2a -----   gcttatacagttatacttcaacacaaactagtagatcttaaattttaagttgattacattatgaccaacatgatctataggaaataatatatgtatagaa  18704100                                                                                            ---------                                                                                            ---------                                                                                           --------->SPL7                                                                                         <---------SPL7                                                                                       --------------                                                                                       <-------------                                  --------->ANAC58                                     --------->ALFIN1                         --------->ARR11(3)                                            <-------------                         --------->ARR14(2)                                            <---------ZAT6                         <---------ARR11(3)                                          <---------ANAC58 ----------ID1           <---------ARR14(2)                                          <---------ANAC58 ---------->GT1         <------ZmHOX2a(1)        --------->ANAC58                    <---------ANAC46 -------->GT1 <---------ZAT6      --------->ANAC58            ------>ZmHOX2a(1) <------ZmHOX2a(1)  -- ----->DOF2   ----------->GT1 --------->YAB1     --------->ANAC58              --------->ICU4      --   aagagaaaaactgatagtgataaataggatattgataagcaagtagttgataagcattgacttcctccataagtcatagtcaggatggagtggtacgaca  18704200  Previous    Next  AGI:  At2g45350.1    Description:  CRR4 (CHLORORESPIRATORY REDUCTION 4). similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G29760.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72187.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 18701890    to: 18703710    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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