Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <-----------ARR10                                    --------->ANAC58                                    --------->ANAC46                                <---------ZAT2                                 <---------ARR14(2)                                 --------->At4g35610                    --------------->AGL15 <---------ARR11(3)                        --------->ZAT2         <---------REM1(1)       --------->ARR14(2)                      --------->ANAC58  ==========    <----------DOF2 <---------------AGL15 --------->GLK1(2)       <------ZmHOX2a(2) <---------At4g35610 ------>DAG2       --------->TOE1(3)--------->ANAC58 <------NtERF2================================HOX2a_HOX2a ------>DOF2       --------->TOE2(3)<---------ANAC55(2)  <---------ATHB12--------->ANAC58  <------ZmHOX2a(1)   aaagtgcttaattgtagcaaacctaaaaatagaagaatacgcaaaatctaacctcggcaatgaaatcgatcagacaagccttgtccagctacaggaccga  18693000                                                           --------->LBD16                                                       --------->GLK1(2)                        <------ZmHOX2a(1)     --------->TOE1(1)                 <---------YAB1              ------>ZmHOX2a(1)              <---------ARR11(3)      <------NtERF2    <---------ARR14(2)                        ----         ------>ZmHOX2a(2)       <---------LBD16       --------->ARR14(2)                     >>>>>>>         ======================HOX2a_HOX2a  <---------ANAC46                              <------ZmHOX2a(1) ===============HOX2a_HOX2a <---------MYB46(3)--------->TOE2(1)                     --------->CCA1(2)   gcacaaggtgatccaatttcttattaggaatggttcgcgcgtcgttcctcgtagccgaatccgaagaaaaatcaacaagtgaagagagatgaggaagaag  18693100                                             <------ZmHOX2a(2)                                            --------->ARR11(3)                                            <-----------ARR10                                            <---------ARR14(2)                                            <---------ARR11(3)                                    --------->LBD16                                    --------->At4g35610                         <---------YAB1                               --------->DEAR3(1)                   <---------HSFB2a(2)         -----           --------->ICU4    ------>NtERF2  --------->ARR14(2)      --------->LBD16       <----------  <---------ZAT14           --------->ANAC58<---------AGP1  --------->GLK1(2)  --------->YAB1   -----  --------->ZAT14           --------->ANAC46--------->ARR14(3)      --------->HSFB2a(2)--------->ARR14(2)  --------->ZAT18---------->DOF2   --------->ANAC46      <---------MYB52(1)    --------->AHL20(2) ------>DOF2 <---------ANAC55(2)<---------SPL7------>ZmHOX2a(2)    <---------LBD16     <---------ARR14(2) >>TBF1 <------ZmHOX2a(1)   --------->ANAC58<---------ARR14(3)    <---------LBD16      <---------TOE1(2)   aaagagcacaggaataagtaaaagaattcgacgccatccgctacaagatctcatgctccgataatctctccgggaacccattaatatcgtattttcaacc  18693200                              --------->ALFIN1                            --------->LBD16                                                <---------ANAC58                          --------->At4g35610                                              <---------ANAC58                          <---------LBD16                                                  ----------              =========================HOX2a_HOX2a                                         <---------ANAC46           --------->DEAR3(1)<------NtERF2                                              ----------->HVH21        ------->GAMYB --------->GLK1(2)                                                 ----------->TGA1   ------->GAMYB      --------->ARR14(2)                                              <---------ANAC58  --------->ANAC58    <---------ARR14(2)                                              --------->ANAC55(2)  --------->ANAC46    ------->TEIL <------ZmHOX2a(1)                                  <---------O2  --------->ANAC58 *TSS <---------LBD16                              --------->LBD16  <---------ANAC55(2) ---->TOE1(3) <------ZmHOX2a(2) <------ZmHOX2a(1)  ----------->RAV1(2)                --------->ANAC46 -GT1  --------->MYB46(3) --------->LBD16    ----------->HVH21      <---------LBD16   <---------ANAC58 ---->TOE2(3) ============================HOX2a_HOX2a              <---------LBD16    --------->O2   ttcaacgcaatcgccgatcaaacgaatccgcggaggaggactgactactgaccgcctgaaaaaaactaaaccgggaagaacccaaactacgtgacgttta  18693300                               --------->WOX13(1)                            <-----------TGA1                           <---------bZIP60(1)                           --------->bZIP60(2)                           --------->bZIP60(1)                       ------>NtERF2                       <---------RAP2.6(3)                   ---------->DOF2                       <-----------HVH21                --------->YAB1                      <---------ANAC58                 <---------YAB1                      --------->TOE2(3)               <---------ARR11(3)                  <----------DOF2               ------->TEIL       <     <-----------HVH21<---------ANAC58         --------->ZAT18           <---------ANAC55(2)       <- ->GT1         --------->ARR11(3)              <---------ZAT18           --------->ANAC55(2)------>ZmHOX2a(1)   tttgaactgtcatcgaatatcatgccgtctcgtcattcacttatctgagtgggctttataatagaaaggcccagtacataatgtatatcgattcctaagt  18693400                             <-----------TGA1                             <-----------HVH21                            <---------TGA2(1)                            --------->ETT(2)                            --------->bZIP60(1)               --------->ZAT2                   <---------ANAC58                           <---------At4g35610           <-----------RAV1(1)                                --------->At4g35610          *TSS     <---------ANAC58                           <---------ZAT2      --------->ANAC55(2)   <---------bZIP60(1)       <----------DOF2                     ------>ZmHOX2a(1)      <---------ANAC55(2)   <---------ETT(2)    --------->At4g35610         <---------HSFC1(1)   --------->ARR14(2)    <-----------RAV1(1)    <---------At4g35610         --------->HSFC1(1)   <---------ARR14(2)  --------------------->WRI1 ----------->HVH21         <---------HSFB2a(2)     < ---------ANAC46   <---------ANAC46             ------>ZmHOX2a(1)           --------->HSFB2a(2)  <--- -----NtERF2   <---------At4g35610        ------>ZmHOX2a(1)<---------At4g35610          ----------->RAV1(2)   tggcgaatacataatgttgctgcgtctctgtcgtcatcgacttcctcttcctctgactttgagcagctctgtcttcttctcgaaatcgtctcctgtttct  18693500                                      --------->GLK1(2)                                      <-----------ARR10                                      --------->ARR11(3)                                      <---------ARR11(3)     <---------AtLEC2           <---------HSFB2a(2)                      ----------->GT1  <----------DOF2               --------->HSFC1(1)              <---------ZAT18               <------ ---------At4g35610             <---------HSFC1(1)              <---------ZAT14               ------- ------At4g35610                --------->HSFB2a(2)             --------->ZAT14   <---------YAB1   tctgctttcatggatgcttcaaatcccaattcttctagaaaatctaatgtctcttccttcgctcagtccagtcgaaggtgaattctaatttttcaaatta  18693600                                                                                             <-------                                                                                            ---------                                                     <---------MYB46(3)                     <--------                                                  <---------ANAC46                         ==========                                                  <------MYB46(1)                          <------ZmHOX2a(1)                                                  <---------ANAC58                      =============                                                  <------MYB83                          <------ZmHOX2a(1)                                                  <---------ANAC58                    --------->ALFIN1                                                 <---------AtMYB61                   <------ZmHOX2a(1)    ----------->GT1                              --------->MYB46(2)           <---------MYB46(3)   --------->DAG2            <---------TOE1(2)   --------->MYB111(1)          --------->MYB55(2)  ---------->DOF2       <-----------GT1          <---------MYB46(3)          --------->ALFIN1-------- ---ATHB51         <---------YAB1           <---------TOE2(3)    <---------WOX13(1)  ================ -->AHL20(2)    <----------DOF2             <---------TOE1(3) <---------YAB1 <---------AtMYB61 <-----   ttcgaaaagtcaaaatcccttttgattttccctcgttttttcatgtaaggtttggtgtttgattttgatggatttagcggtggtagaggaggaggatatg  18693700                                           <---------DEAR3(1)                                         <---------MYB46(3)                                        --------->ALFIN1                                     <---------DEAR3(1)                                    <------NtERF2                                    --------->ATERF1(1)                                   ------>NtERF2                                  <---------DEAR3(1)                                  ----------->HVH21        ------->GAMYB             --------->ETT(2)     --------->MYB52(1)<-----------RAV1(2)--------->ATERF1(1)     <---------DOF5.7(2)         <------NtERF2 --GLK1(1)   <---------LBD16 --------->MYB52(2)         xxxxxxxxxxxxxxxxxxx>smallRNA(se3) >ARR14(2) --------->ETT(2)  <---------ANAC46        <------ZmHOX2a(1) -ARR14(2) <---------ETT(2)  <---------ANAC58 <---------ANAC46 ================HOX2a_HOX2a <---------ANAC58<---------LBD16 ================HOX2a_HOX2a <---------MYB46(3)  ---------->DOF2 ->CCA1(2) ----------->HVH21 <---------bZIP60(2)<------NtERF2 ================HOX2a_HOX2a--------->ALFIN1 <------NtERF2         ------->TEIL ----YAB1 <------ZmHOX2a(2)<-----------HVH21 --------->ATERF1(1) <---------ZAT18                <----   agagagataacgatcgacggagacctcagggtcgtggcgacggtggaggcggaaaggatagaatcgatgcacttggacgactcttgtaagtgtaatcgat  18693800                                                               <------ZmHOX2a(1)          --------->HSFB2a(2)                               <---------ICU4   ----------->RAV1(1)          <---------HSFB2a(2)                         --------->YAB1   <---------KAN4(1)     --------      --------->ARR14(2)    <---------ANAC58         ----------->GT1  <---------ARR14(2)     <-------      <---------GLK1(2)     <---------ANAC58  --------->YAB1--------->YAB1  <----------ID1   -------- --ZmHOX2a(2)<---------ARR11(3)         ------->TEIL<---------WOX13(1)--------->GLK1(2)      <-------   caatactggattctagatgttagagaattagcttgaattttgaatctataatggattgataatcaggacgagaatattgcgacatatggctactgagctg  18693900  Previous    Next  AGI:  At2g45320.1    Description:  binding / catalytic. similar to unnamed protein product [Vitis vinifera] (GB:CAO24538.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 18691190    to: 18693219    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g45330.1    Description:  EMB1067 (EMBRYO DEFECTIVE 1067); tRNA 2'-phosphotransferase. similar to tRNA 2'phosphotransferase, putative [Arabidopsis thaliana] (TAIR:AT5G23600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24541.1); contains InterPro domain Phosphotransferase KptA/Tpt1; (InterPro:IPR002745) Range:  from: 18693410    to: 18695109    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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