Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------ANAC58                                                        --------->ATHB12 <---------ANAC58                                                 ------->MYC3       <-----------------------TaNAC69(2)                                                 <-------MYC3   ----------->ARR10      <---------ANAC58                                                <---------O2<------MYB46(1)            <---------ANAC46                           <---------ARR11(3)   --------->O2<---------MYB46(3)   --------->ICU4                         ------>MYB83   --------->At4g35610 <------MYB83 <---------ANAC58  <------NtERF2      <------ZmHOX2a(1)  ------>MYB46(1)--------->ZAT2 <---------YAB1<---------ANAC46  <---------ANAC58 ------->DOF2       --------->ZAT6      <---------ZAT2 --------->ICU4<---------ANAC58 <---------LBD16   caaaggaaggacaatatcggtaacaccaagctctaagaacccagctcgacatgtgtcaagattggttagagccgtgcttagccatgtttgcgcgtcgagt  18653100                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   ==                                                                                            ---------                                                                                           ------->MYC3                                                                                           <-------MYC2                                                                                           <-------MYC3                                                                                          <---------TGA1a                                                                                          <---------O2                                                                                          --------->TGA1a                                                                                          --------->O2                                                                                          <---------ANAC58                                                                                          --------->ANAC55(2)                                                                                          ===========                                                                                          <---------ANAC58                                                                                          <---------ANAC46                                                                                          <---------ANAC55(2)                                                                                   <---------DAG2  --                                                                                   <----------DOF2<--                                                                                   ==================                                                         --------->ARR11(3)        =================bZIP_DOF                                                    <---------ANAC46         --------->ANAC46   -----                            <---------ANAC46    <---------AtMYB61            --------->ANAC58  <-----                   <-------TEIL              <-----------HVH21               --------->ANAC58 -------  <---------ZAT18 >>>>>>>>>>>>>>>>>LFY     <---------DEAR3(1)              <---------ALFIN1------->MYC2   tttgagcacttcacgtttgggtccattgtctcgttgattttagagacggtgaggtcgtagagcttgatacaatcttcccacgctgctttttcacgtgtgt  18653200     <----------DOF2 <---------ZAT18 ------->ANAC46 --------ANAC55(2) ------->ANAC55(2) ------->TGA1a ------->ANAC55(1) ------->O2 --------O2 --------TGA1a ------->bZIP60(2) --------bZIP60(1) ------->bZIP60(1) ------->ANAC58           --------->ALFIN1 ===============bZIP_DOF <-------MYC3 >ALFIN1                 ------->MYC3 ===============bZIP_DOF>>>>>>>>CAMTA3                                  --------->GLK1(2) ------->ANAC58         <---------ANAC46                               <---------ARR11(3)      <----- -------LBD16           <---------ANAC58                               --------->ARR11(3)      <----- ========bZIP_DOF       <---------ANAC58<------ZmHOX2a(1)            <---------TOE2(3) <---------ARR14(2) ------>HVH21   <---------ZAT6      <---------ANAC46            --------->ATHB12       --------->ARR14(2) ------HVH21    <---------ANAC46    <---------ANAC58           <---------YAB1       <xxxxxxxxxxxxxxxx ---->HVH21  ------>ZmHOX2a(1)      <---------ANAC58           <-------TEIL        <---------LBD16   cacggcactttggtcctagtgtgaacgcgtgggttttggcgaggatggctcggtctaatacgagtttcattgagattttgagaaactcggattcagactt  18653300                                                                             ===============bZIP_DOF                                                                             --------->ANAC55(2)                                                                             <---------O2                                                                             --------->TGA1a       --                                                                             --------->O2         <--                                                                         <-----------HVH21        ---                                                                        <----------DOF2        ------                                              <---------TOE1(3)--------->At4g35610          ------->TEIL    <-------TEIL                   --------->ANAC46            <---------ZAT14            <---------SPL7 -----DOF2                         --------->ANAC58            <------NtERF2 --------->ANAC46 <------ ----DAG2        --------->CCA1(2) --------->ANAC58     --------->ALFIN1===============bZIP_DOF------ xxxxxxxsmallRNA(si3)     <---------TOE2(3)   <---------TOE2(3)--------->ZAT18   <----------DOF2-----   tatgggttcattgtttgagttatgggttaagaaatactcgcaaggtttagggtttggagtttggctgcaccatgctttcacgtctttctggttgtacccg  18653400     <---------MYB46(3)                  --------->YAB1     <---------DEAR3(1)                  --------->AHL20(2) ------->MYB52(1)                        <---------AHL20(2) -------ARR14(2)                    --------->AHL20(2)        --------->YAB1 ------>ARR14(2)                  ----------->GT1            <---------YAB1 --->LBD16                      ---------->DOF2         --------->ANAC58 ---LBD16------>NtERF2      <------ZmHOX2a(2)           --------->ANAC58 --->ANAC46  --------->O2  --------->ARR11(3)          --------->DAG2   ------>MYB46(1) ---->LBD16  <---------O2  <---------ARR11(3)         ---------->DOF2   ------>MYB83--------->CCA1(2)   gaaacggtcgatgccacgagaatgcataagatcacaaagttaataatataagctcgaaaagccatcataagaccaaatgttttgagaaacgagaagtttg  18653500                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                         --------->AHL20(2)                      --------->CCA1(2)                                               --------->YAB1                     *TSS                                                             <---------ICU4                   ----------->ARR10                                                 --------->ICU4             <---------WOX13(1)                                                    --------->YAB1           --------->ATHB12                                                       --------->AHL20(2)          <---------YAB1                                                          <---------AHL20(2)      <---------ARR14(2)                                                         <---------AHL20(2)      --------->ARR14(3)                                                         --------->AHL20(2)<-      <---------GLK1(2)                                                      <---------AHL20(2)  ----      <---------ARR11(3)                               --------->ALFIN1      --------->AHL20(2)  <---      --------->ARR11(3)                     --------->AHL20(2)         <---------AHL20(2)    -------      <---------ARR14(3)                     <-----------TBP            --------->AHL20(2)   --------   tgtttgaagattttgattgatgagatttgagtcttgaatcgatgtgtttatatagatgtggggacttatgttttttaatttaaattaataatcaaatata  18653600                                                                <---------WOX13(1)          <---------YAB1                                    <---------ATHB12          <---------AHL20(2)                              --------->MYB52(1)     <---------AHL20(2)                                 <---------MYB55(2)   <---------ANAC55(2)                                  --------->MYB46(3)        <------NtERF2   ----------->GT1                                      <---------ATHB12         <---------RAP2.6(3)   --------->ANAC55(2)                                 --------->ANAC58          ------>NtERF2 -->AHL20(1)                                           ------>MYB46(1)          --------->RAP2.6(2) ---AHL20(2)                                           ------>MYB83  <---------DOF5.7(2) ---AHL20(1)                                           -------->P <------MYB83  --------->bZIP60(1) ---ARR11(3)                                           --------->ANAC58         <---------bZIP60(1) -->AHL20(2)                                          --------->MYB55(1)   <---------ICU4 --------AHL20(2)                                    <---------MYB111(1)   --------->YAB1 ----->AHL20(2)                     ----------->GT1  <---------MYB111(2)  <------ZmHOX2a(2) ------AHL20(2)                   ---------->DOF2    <---------MYB46(2)  --------->ARR11(3)--------->TOE2(3) -->ARR11(3)        <---------REM1(1)                --------->MYB46(3) ------->GAMYB   <---------GLK1(2) ->AHL20(2) <------------CBF ---------->DOF2      <-----------GT1 <------MYB46(1)<-----------HVH21   ttaatatgtaatttcattgtagttgaagcaaaaaagaaaagtatatatgtttataccaaccaatggattggtaacgatcatgccgtcatatattctcaat  18653700                                        <---------ZAT14                                      --------->REM1(2)                                   <---------ANAC58                                   <---------ANAC55(1)                                   ============================bZIP_DOF                                   <---------bZIP60(2)                                   <---------TGA1a             <---------ANAC58      <---------ANAC46              --------->ANAC58             <---------ANAC58      <---------ANAC58              --------->ANAC58           <-----------GT1         <---------O2                  --------->ANAC46      <---------AHL20(2)           --------->O2            ----------->HVH21                        -     --------->AHL20(2)         ----------->HVH21          --------->WRKY38(1)               --------     <---------AHL20(2)     =================bZIP_DOF  --------->ATHB12                   -----------    --------->YAB1          <----------DOF2         <----------DOF2             <---------ZAT6  <----   tttgaattttaattttcttgtttgtgctatctttttgacgtgtatactaatacgctttgatttgaccacgaaacaaattttagtgtgatattcagtaata  18653800                                                                    --------->AHL20(2)            ---                                                                  --------->ANAC58                ---                                                                  --------->ANAC58       --------->ANAC58 ---------->GT1                                                   ----------->GT1     <---------ARR14(2) ->YAB1                                                   <---------YAB1              --------->ARR14(2) >GT1                                                <---------AHL20(2)  --------->YAB1  <---------ANAC55(2) -------GT1   <---------ETT(2)                      --------->AHL20(2) --------->AHL20(2)--------->ANAC58   accagaaaaaaatcagtctacaatctaatcttggtacaaagtattggacacagattaaatgtgatagcaagaaaataataggtttacgaatacgcataaa  18653900                                      --------->AHL20(2)                                     <---------AHL20(2)                                     --------->AHL20(1)                           <----------DOF2   --------->YAB1                        <-----------GT1--------->YAB1          -------->P  <---------AHL20(2)  --------->YAB1 ------>YAB1        <---------AHL20(2)<---------AHL20(2)--------->ARR14(2)                     <----- -------->GT1 <----------DOF2        --------->AHL20(2) <---------ARR14(2)                     ------   tcgtaactagtctaccctttatattttttctttctcaaatttaataatcttactggcataaacgcgtctatgggacttaaactcaattgacttaaacatg  18654000  Previous    Next  AGI:  At2g45220.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G51490.1); similar to Pectinesterase-2 precursor (Pectin methylesterase) (PE) (GB:O04887); similar to unnamed protein product [Vitis vinifera] (GB:CAO67274.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24514.1); contains InterPro domain Carbohydrate-binding and sugar hydrolysis (InterPro:IPR006633); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contain Range:  from: 18651158    to: 18653521    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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