Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ALFIN1                                       --------->AtMYB61                                       ------->GAMYB                                      --------->MYB46(3)                                     -------->P    <---------ARR14(2)                               --------->SPL7 ------------>AtMYB77                --------->TOE2(3)                            <------MYB46(1)  ----------->HVH21                    --------->TOE1(3)--        <---------TOE1(2)   <------MYB83    --------->TOE2(1)                 <------ZmHOX2a(1)  ----     ------>ZmHOX2a(2)     <---------------AtSPL8  --------->ARR14(2)       --------->ANAC58     ----   <---------ARR11(3)      <---------------AtSPL3 <-------GAMYB     <---------ANAC58            -----   --------->ARR11(3)     <---------WOX13(1)--------->TOE1(1)       <---------ANAC58       ---------- -ZmHOX2a(1)      ---------->DOF2 <---------At4g35610<---------At5g28300    --------->ANAC58---------   catatgatctcatgttcaccgaaaggagattggtacagcaaccacatcggacagttacggtcttgaacaagcttgtgtaaggaacattaacctataagca  18637400 ---------->DOF2 ------->ANAC46 ----->ANAC58    --------->AHL20(2) ----->ANAC58    <---------AHL20(2) ---->ZAT18     --------->AHL20(2)        =============================HOX2a_HOX2a >DOF2        ------->TEIL                <------ZmHOX2a(2)      ----------->GT1 >YAB1     <---------ATHB12              --------->ARR11(3)     <------ZmHOX2a(1)---------->DOF2-----   cacaaaagaaacaatgaatttaaaaaacccctaatcttgtatagatcaagaagatgagaagttggaggagaaaaaatgagagagaaagtattgaagagag  18637500                                                                                        ----------->RAV1(2)                                                                            --------->LBD16                                                                            --------->At4g35610                                                                          <---------LBD16     <------ZmHOX2a(1)                                                                          --------->SPL7<---------At4g35610                  <------MYB46(1)                                        --------->PCF5 --------->At4g35610                  <---------MYB46(3)                                    <-----------HVH21   <--------                  <------MYB83                                     <-----------------------TaNAC69(2)             --------->ANAC58                                     <---------ZAT14   --------->MYB52(1)       --------->SPL7       --------->DAG2                    <------ZmHOX2a(1)   --------->MYB46(3)   <---------------AtSPL3  ---------->DOF2              --------->ETT(1)<---------SPL7  --------->ZAT2 ------>GT1  --------->ANAC58                       <---------AtMYB61 --------->ALFIN1  <---------ZAT2   gttattttgtaccgcaaggatggtttggcaaaagttgcattggacatagcagagatggtcggaaggagagaagtggtccggtgaacaaacagctgaggaa  18637600                                                             <----------DOF2                                                             --------------->AGL15                                                            <-----------------AGL3                                                            ------>ZmHOX2a(2)                                                            =========================================                                                          <---------ARR11(3)                <--------                        <----------DOF2                   --------->ARR11(3)          --------->ATHB12                     <---------ARR11(3)      --------->AHL20(1)                      <---------YAB1           --------->ANAC58                  --------->ARR11(3)                   --------->ARR14(2)           --------->ANAC58                  <---------AHL20(1)                   <---------ARR14(2)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)----------->GT1<---------ZAT2          <---------LBD16 -------   <------ZmHOX2a(1) --------->ARR11(3)<----------ID1 <---------At4g35610--------->ALFIN1 --------->ATHB12 -TOE2(3)  --------->ANAC46           ----------->GT1 --------->At4g35610<---------ZAT6 <---------WOX13(1)   ggggaggacatagacgacatagacatcttttttgtaagaaggggaaaaatattggaagctgatctttttttgggagtgtttggggatttgattgattgat  18637700                                                                            <---------ANAC58                                                                            <-------GAMYB                                                                            <---------ANAC58                                                                           <------MYB83                                                                      <-----------RAV1(1)                                                                      <---------MYB46(3)                               ----------->GT1        <---------ARR11(3)   <---------ANAC58                              =================================HOX2a_HOX2a <------MYB46(1)                              <------ZmHOX2a(1)       --------->ARR11(3)   <---------ANAC58                      <---------------AGL15     ------>NtERF2        <---------WOX13(1)                  --------->ARR14(2)           <---------ALFIN1    --------->ATHB12                  <---------ARR14(2)      <-----------GT1  --------->ARR11(3)       <---------WOX13(1)    ----------->GT1--------->ANAC46 ------>ZmHOX2a(2)        *TSS =====================================MADS_MADS--------->ANAC46   <---------YAB1 <---------ANAC46 --- -WOX13(1)        <---------GLK1(2)   --------->AHL20(2)   <---------ARR11(3)<--------P --------->AHL20(2) -->ATHB12       <------ZmHOX2a(1)   --------->AHL20(2) ------>ZmHOX2a(2) <---------MYB46(3)<--------   gggtatttgactgatcagaggattcttgataaggagaaaataaaaaaccccaccatgatctgatcttcttgattgttgggttgctgtgtattatatacca  18637800                                                           <---------AHL20(2)                                                           --------->AHL20(1)                                                           <---------AHL20(1)                                                           --------->AHL20(2)                                                           <---------ARR11(3)                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                   --------->ARR11(3)             ----------->RAV1(1)                                                   <---------ARR11(3)            <----------ID1                                                   --------->ARR14(2)        <---------AHL20(2)      <---------ARR11(3)                           <---------ARR14(2)    --------->ICU4      --------->ARR11(3)    ---------->DOF2      ----------->GT1     --------->At5g28300     <------- ------->DOF2             ----------->HVH21   --------->DAG2        ----------->GT1 --------->MYB46(3) ---GT1--------->CCA1(2)----------->GT1     ---------->DOF2--------->ARR11(3)--------->AHL20(2)  <---   caaaggaagatatatagagagagaagaggtgaaaggagtgagaagggaaaggggatattaatatattagagggtaaaaattaaacaacaaatgctctaat  18637900                                  --------->AHL20(2)                                  <---------AHL20(2)                                  <---------AHL20(1)                                =====================================================================                                <-----------------AGL1                                <-----------------AG                  <---------ANAC46                             <---------MYB52(1)                     ----------->GT1                            --------->TOE2(3)                       <---------ANAC46                           ----------->GT1                    <---------AHL20(2)                      <---------AHL20(2)          <---------ANAC46 --------->ALFIN1 --YAB1              --------->AHL20(2) ----------->GT1   --------->AHL20(2) ------REM1(1)       <---------AHL20(2)--------->MYB59    <---------AHL20(2) <-----------GT1    <----   tgtagcctctaggtcgtctactattaatttcgttaattaattcggtaatactgtgtgtatatatataatgtggtgtattatacatttcaattcagcgata  18638000                                                                                 --------->ANAC58                                                                               --------->MYB46(3)                                                                            <---------ZAT18                                                                            --------->ZAT18                   >>>>>>>>>>>>>>>>>LFY                             <---------At4g35610                   <<<<<<<<<<<<<<<<<LFY                             --------->At4g35610                   <---------------AGL15  <---------TOE2(3)       <---------WRKY12  ----------->RAV1(1)      <----------DOF2            <-----------GT1                  <---------WRKY38(1)  --------->TOE2(3) ==================================MADS_MADS         ----------->GT1<------NtERF2--------->ANAC46 ---TEIL ---------->DOF2  ----------->GT1 <---------TOE1(3)     <-----------HVH21--------->ANAC58   catatattctttaaagaaattctccaatgggttatatacaattttaggttttgaatagtataacagagtcagcggtagtgaaccagcaacataaatggaa  18638100                                                    <---------MYB52(1)                                                   --------->LBD16                                         --------->AHL20(2)                                         <---------AHL20(2)                                 <--------          <---------REM1(1)          --------->AHL20(2)                                    --------->AHL20(2)          <---------ANAC46          --------->YAB1<---------DEAR3(1)            --------->AHL20(2)        <------MYB83               --------->AHL20(2)                           <---------AHL20(2)        <------MYB46(1)          ------>MYB83     <---------DREB2C(2)       --------->AHL20(2)      -       <---------AtMYB61         ------>MYB46(1) <---------LBD16     --------->YAB1      --------->TOE2(3)     <---------AtLEC2   --------->ZAT6 --------->YAB1    <---------AHL20(2) <---------AHL20(2)    <--   taagtttggatggtgtagaacagataacacaaaccaaataaaaataaatatgccggtgtttaataagacaataactatttatataatttttcattaaatc  18638200                                                              <---------ARR14(2)                                                              --------->ARR14(2)                         --------->AHL20(2)                <---------HSFB2a(2)         <---------AHL20(2)                                --------->HSFB2a(2)         --------->AHL20(2)                       --------->YAB1     --------->ANAC46     <------NtERF2   ------>ZmHOX2a(2)           <---------AHL20(2)<---------ALFIN1 -AHL20(2)    <---------AHL20(2)      --------->TOE2(3)   <---------LBD16   --------->ANAC46 -------->ALFIN1 <---------YAB1     <-------TEIL--------->AHL20(2) --------->REM1(1) -------O2<---------AHL20(2) --------->AHL20(2) <---------AHL20(2)--------->ZAT14                   <   aagtggccgaataaaatttatgatcgataaaataaacatacattagtttttttaataagtttcggaactacaccctaaacaccatttgaataagcagttc  18638300  Previous    Next  AGI:  At2g45190.1    Description:  AFO (ABNORMAL FLORAL ORGANS); transcription factor. Identical to Axial regulator YABBY 1 (YAB1) [Arabidopsis Thaliana] (GB:O22152); similar to YAB3 (YABBY3), transcription factor [Arabidopsis thaliana] (TAIR:AT4G00180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24510.1); contains InterPro domain YABBY protein (InterPro:IPR006780); contains InterPro domain High mobility group box, HMG (InterPro:IPR009071) Range:  from: 18635339    to: 18637786    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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