Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------AHL20(2)                                                                --------->AHL20(2)                                                            <---------AHL20(2)                                                        -------->HAHB4                 --------->DAG2                                                        <---------ICU4       <---------YAB1       --- --DEAR3(2)       -------->P                            <---------AHL20(2) --------->YAB1         --- --MYB46(3)     --------->MYB46(3)                     <---------ATHB51    <---------ICU4         --- -DREB2C(2)    --------->At4g35610                     <---------ATHB12   <---------ATHB12        <-- >ETT(1)<---------TOE2(3)                              --------->ICU4     --------->ICU4----------->GT1 -DEAR3(1)     <---------At4g35610                     <---------YAB1     <---------ATHB51        --- >ID1  ---------->DOF2   <---------YAB1             <---------YAB1 <-----------GT1    ---------->DOF2   ctagcccattaaagttcagcaacccttattattcattttttagtctttctatttctaattattcaattttatccaaataatgaatgaataaagttaaaca  18630900                                          ------->MYC2                                          <-------PIF5                                          <-------MYC3                                          ------->MYC3                                          <-------MYC2                                          ------->PIF5                                         <---------ANAC55(2)                                         <---------TGA1a                                         --------->bZIP60(2)                                         --------->TGA1a                                         <---------O2                                         --------->ANAC58                          <-----------GT1--------->O2               --------->AHL20(2)        --------->ANAC58             --------->AHL20(2)          --------->ANAC55(2)             <---------AHL20(2)         ------>NtERF2           --------->AHL20(2)        --------->ABI4(1)           <---------AHL20(2)       --------->DEAR3(1)    ----------->GT1  <---------AHL20(2)<---------ALFIN1                            <---------DOF5.7(2) <---------ALFIN1    --------->AHL20(2)<------------OsbHLH66                     --------->DOF5.7(2) ------>DREB2C(2)  <---------AHL20(2)------>NtERF2                              --------->TOE2(3) ------>DEAR4(1)   --------->AHL20(2)<-----------HVH21                          --------->TOE1(3) ------>At1g77200--------->AHL20(2) --------->ANAC46                           <---------ANAC46 -------ETT(1) <---------AHL20(2)--------->ANAC46   <---------YAB1      <---------ANAC55(2)         < ------>DEAR3(1) <---------AHL20(2) --------->DREB2C(2)  ----------->GT1--------->ANAC55(2)        --   ccgacactgttatatatatatatatatataacaatacaccgccacgtgagaactacgaatgggaatttcgcattacatgtttcgttaacaatataaactg  18631000                                                                            --------------->AGL15                                                                           <-----------------AGL1                                                                          --------->ZAT14                                                                  --------->ANAC55(2)                                                                  <---------ANAC46                                                                  <---------ANAC55(2)                                                                  --------->O2                                                                  <---------O2  ---------->DOF2 <----                                                     ----------->GT1      <---------ZAT14      <-----                                                    --------->DAG2<---------ANAC58     --------->DAG2                       --------->AHL20(2)         ---------->DOF2 <---------ANAC58 <----------ID1                  ----------->GT1           --------->ALFIN1      <---------ANAC55(1) ---------->DOF2 ------ZmHOX2a(1) <----------ID1         --------->DAG2      ---------->DOF2<---------------AGL15 --------->GT1 ---------->DOF2          ---------->DOF2    <---------ATHB12--------->ZAT6      ------   gaggaaaaaaacacatcgaaaggaaaaaaattcaatgtaagaaaaagtgagggaaaggcaaatcaaagacgtgttctacactaaaaggaaaagtatgagg  18631100                                      --------->ANAC46                                      --------->ANAC58                                      <---------ANAC58                                      --------->ANAC58                                      <---------ANAC55(2)                                      <---------ANAC58  <---------AHL20(2)                                      <---------ANAC46  <---------AHL20(1)                                      <---------ANAC55(1)              <---------AHL20(2)      --------->ANAC55(2)     ---------->DOF2     >>>>>>>>>MYB98          --------->AHL20(2)        <-----------GT1     --------->AHL20(2)       --------->MYB52(1)          <---------AHL20(2)    --------->AHL20(2)      --------->AHL20(1)       ------>MYB46(1)      --------->ZAT6      <------MYB83--------->ANAC55(1)   --------->AHL20(2)   ------>MYB83    --------->MYB52(1)    <------MYB46(1)        <---------ZAT6             <---------WRKY18(1)  <---------MYB52(2)     --------->MYB59    --------->YAB1  <---------AHL20(2) <---------MYB59 --ZmHOX2a(1) --------->AHL20(2)<---------AHL20(2)  <---------AHL20(2)     --------->WRKY12 -----ID1 <---------AHL20(1)    <---------AHL20(1)  --------->ICU4   ----------->HVH21     --------->TOE2(3) ----->GT1--------->AHL20(1)    --------->AHL20(1)  --------->AHL20(2)     --------->WRKY38(1)   aaaaactaacaataaattaaacaaaatttggtattttattacgtaatagtagtattaattaattaaaagaattgacattgacctaacaaaaattcttaaa  18631200                                                                                                   --                                                                                                  ---                                                                                                -----                                                                                             <-------                                                                     <---------bZIP60(2)     --------                                                                     --------->O2            <-------                                                                     <---------O2            --------                                                                     <---------TGA1a      --------->TGA2(2)                                                                     --------->TGA1a     <-----------TGA1                                                                     ================================                                                                     <---------ANAC58    <-----------HVH21                                                                     --------->ANAC55(2)--------->bZIP60(2)                                                                     <---------ANAC55(2)--------->ANAC55(1)                                                                     <---------ANAC46   <---------TGA1a                                                                     <---------ANAC58   --------->O2                                                                     <---------ANAC55(1)--------->TGA1a                                                                   <---------TGA2(2)    --------->ANAC58                                                                  ----------->TGA1      --------->ANAC55(2)                                       ========================================bZIP_DOF --------->ANAC58                            <---------ICU4                        ----------->HVH21     --------->ANAC46                            <------------ATHB5                  --------->At4g35610     <---------ANAC55(2)                            <--------ATHB1                      --------->ZAT2          <---------O2                            --------->YAB1                      <---------At4g35610     =============       ----------->GT1     --------->ICU4                       <---------ZAT2        <---------ALFIN1     ---------->DOF2       <---------ATHB51               --------->ANAC58           <---------REM1(2) ---------->DOF2         --------->YAB1<----------DOF2    --------->ANAC58     <-----------GT1<------   acaaaaagaaagaaaaatttgtttgaacaataatggaatgactttgtttgtttggagaacaagctaagctgacgtgtctaataactcaacacgtcagcta  18631300                                          --------->YAB1      ----------->TBP                    <---------ATHB12    <-----------TBP                    *TSS ----->GAMYB                         ------------>CBF ------>MYB46(3)                 --------->DOF5.7(2) ---->MYB52(1)                  --------->TOE2(3)                                         <------ZmHOX2a(2) --At4g35610                    --------->TOE1(3)           <---------HSFB2a(1)          --------->ARR11(3) ->At4g35610                  <---------TOE1(3)             --------->HSFB2a(1)          <---------ARR11(3) --ZAT2                       <---------TOE2(3)            --------->DAG2            --------->LBD16 ->ZAT2 <---------AHL20(2)   --------->MYB52(1)    ---------->DOF2               --------->ARR14(2) ======MYC_MYB               <---------DOF5.7(2)--------->ANAC46  <----------DOF2<---------ARR14(2) ======MYC_MYB             --------->DOF5.7(2) <---------------------WRI1       <---------CCA1(2) ---MYB52(2)             <---------ZAT6--------->WOX13(1)---------->DOF2    <----------DOF2        <<   acagacatatataaacaagtgtatatagagttaacgttatccaatcatagacgaaaagaaaaaggttcctttttttgactttgtatccgtagatcatctt  18631400                       ------>ZmHOX2a(1)                      --------->TOE1(3)           --------->LBD16                                                   --------->ANAC55(2)          --------->HSFB2a(2)                                     <---------GLK1(1)          <---------HSFB2a(2) <---------MYB52(1)              <---------MYB52(1)     <<<<<<<<<TBF1    --------->TOE2(3)                      <-------GAMYB   <---------ANAC55(2)  ---  <<<<<<<<<TBF1     <---------YAB1                 <---------MYB52(1)    <-----------HVH21  <-------- <<<<<<<TBF1       <-----------GT1     <---------GLK1(2)    <-----------RAV1(1)          <---------YAB1   cttcttcttcttccagagttttatccttatccgttccatcaaattctctctctgtaagttttctgttgatttctctgttacatactctgttttgatttct  18631500                                   --------->ARR14(2)                                --------->ANAC58                                --------->ANAC58                               <---------LBD16                                                     --                         ---------->DOF2                                                         ----                       --------->LBD16                                                           <---                      --------->LBD16             <-------GAMYB                               <------                      --------->ANAC46         <---------ANAC46                           >>>>>>>>>ARR2                     <---------HSFB2a(2)       <---------ANAC58                          --------->ATHB12                     --------->HSFB2a(2)       <---------ANAC58         <---------ANAC46<---------YAB1 ------------>AGL15 <---------LBD16<---------ARR14(2)             <---------TOE1(3)   <----------DOF2 -GLK1(1)      <---------AHL20(2)--------->LBD16 --------->ALFIN1 <---------TOE2(3)<---------ARR11(3)   ctagatttagaattcatttttttcccgaaaagacgcggaatttcgatttgggtgttgaaaacaaaattagggttttgtgtctcaatttctttgattgtgt  18631600                                 <----------DOF2             --------->ICU4 --------->HSFC1(2)        --------->ANAC58    <---------HSFB2a(1)        --------->ANAC58    <---------HSFC1(2)      --------->At4g35610   --------->HSFB2a(1)               <----------DOF2 ------->KAN4(2)           --------->ANAC58             <---------MYB52(1)                         -- ----->ARR14(2)        <---------TOE2(3)                <--------P                               ---- ------ARR14(2)      ---------->DOF2                   <-------GAMYB    <-----------GT1    <---------ANAC46 ---ANAC46 ---------->DOF2 --------->ANAC58 <---------WRKY38(1)       <----------DOF2   ----------->HVH21   atattctcagaagcaaagatgaataaaggaagcatctttaagatggacaacgatttcggttagtcttttattctttactgtttcgattttgtgacctaga  18631700                                                         --------->HSFB2a(2)                                               --------->ARR14(2)                                               <---------ARR14(2)                             <------                                               <---------ARR11(3)                             <------                                              <---------GLK1(1)                               -------                 ------->MYC3                 <---------CCA1(2)                       --------->DAG2   <---------ZAT14               --------->ARR14(2)      <---------HSFB2a(2)         ---------->DOF2   --------->ZAT14               <---------ARR14(2)      --------->HSFC1(1)     ----------->GT1 ------->YAB1<-------TEIL       <---------CCA1(2)    --------->GLK1(1)   --------->ZAT18--------->At4g35610 ----->GLK1(2)   <-------MYC3<-------TEIL    ------->TEIL<---------HSFC1(1)   ---------->DOF2 -------   atcagtatagaggcatacatgtgtatcagcgttcatatctgtatatgtatatctgatttctagagattgtttatgtgcagaaaagagaaaagctgaagct  18631800  Previous    Next  AGI:  At2g45170.1    Description:  AtATG8e (AUTOPHAGY 8E); microtubule binding. Identical to Autophagy-related protein 8e precursor (ATG8E) [Arabidopsis Thaliana] (GB:Q8S926;GB:Q945K6); similar to ATG8F (AUTOPHAGY 8F), microtubule binding [Arabidopsis thaliana] (TAIR:AT4G16520.2); similar to ATG8F (AUTOPHAGY 8F), microtubule binding [Arabidopsis thaliana] (TAIR:AT4G16520.1); similar to unknown [Populus trichocarpa] (GB:ABK96134.1); contains InterPro domain Light chain 3 (LC3) (InterPro:IPR004241) Range:  from: 18631339    to: 18632791    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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