Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------ALFIN1                          --------->YAB1                          <---------ICU4                         <---------YAB1        <-----------GT1<---------ICU4       --------->ICU4  --------->YAB1      <---------MYB52(1) -------ZAT2          <---------YAB1     <---------ANAC58 ------>ZAT2          --------->ICU4  <----------DOF2 -->MYB46(1)         <---------ARR11(3)  <---------ANAC58 -->MYB83     --------->YAB1   --------->At4g35610   <---------AHL20(2)                            -- ----MYB59   <---------YAB1  <---------ICU4--------->DOF5.7(2)                                   ----   agctgtgtaattaccatcatcgtgatcatcatcatctccactttcgttaccttgtttaatctctggtctattctccatagcttccattcgcttaaaatga  18445200                                <------ZmHOX2a(2)                               <---------ARR11(3)                               <---------ARR14(2)                               --------->ARR14(2)                                                  <-                               --------->ARR11(3)                                                  --                               <---------AGP1                                                     ---                               --------->AGP1                         --------->HSFC1(2)         ----                               <-----------ARR10                      <---------HSFB2a(1)       -----                        --------->LBD16                               <---------ZAT2          -------                        <-----------HVH21                             <---------At4g35610     <------                       --------->DREB2C(2)                            <---------HSFC1(2)    ---------                       --------->ANAC46                               --------->HSFB2a(1)   ---------                       --------->DEAR3(1)                            <---------ARR14(2)  <---------ZAT14                       <---------ATERF1(2)                           <-----------ARR10   <------NtERF2                       --------->ATERF1(2)                        --------->HSFB2a(2)    --------->ZAT18                      <------NtERF2                               <---------HSFB2a(2)   ------>NtERF2                     <---------ATERF1(1)                    <---------DAG2             <---------ATERF1(2)                     ------>NtERF2                      <---------MYB52(1)             --------->bZIP60(1)                     --------->MYB52(1)               --------------->AtSPL8           --------->ANAC58                    --------->DEAR3(1)                --------------->AtSPL3           <---------bZIP60(1)                    <---------ALFIN1                 --------->SPL7--------->LBD16     --------->ANAC58                 --------->ANAC58            ------->TEIL  ----------------->AGL1      <---------RAP2.3(3)                 --------->ANAC58           <---------CCA1(2)<----------DOF2          --------->RAP2.6(3) ------->TOE1(2) --------->ANAC46------>ZmHOX2a(2) <---------SPL7<---------LBD16    ----------->HVH21 --->TEIL   <-----------GT1   <---------CCA1(2)    <-----------HVH21 --------->ARR14(2)--------->ATERF1(2)   acccaagacgatataaacctcgccaccggcacagatctagctctctgtatctcggtccggtaccttttccggagcttctccatcttgtgacggcactgaa  18445300                                      ------>MYB83                                      ------>MYB46(1)                                      -------->P                                     --------->MYB52(1)                                    --------->MYB46(3)                             <---------MYB52(1)                            <-------GAMYB                        ------------>AtMYB77                       <------NtERF2<---------MYB111(1)                      <---------DEAR3(2)------->GAMYB                     <---------DEAR3(1)--------->MYB46(3)                    --------->ALFIN1<---------MYB55(2)                   <-----------HVH21--------->DEAR3(1)                  =============================MYC_MYB                                          -----                  ==================MYC_MYB                                                  <------- --------LBD16    ==================MYC_MYB   <---------HSFB2a(2)                            <------- ------->LBD16    ===================MYC_MYB--------->At4g35610                             --------- ------>DEAR3(1)  --------->ANAC46  --------->AtMYB61                                <-------GAMYB ----->MYB46(3)   <---------bZIP60(1)--------->MYB55(1)                           --------->LBD16 -->TEIL          --------->O2      <---------MYB111(2)                      <---------GLK1(1)------- -->ZAT14         <---------TGA1a   <---------MYB46(2)                       --------->GLK1(1)<------ ---ZAT14         --------->TGA1a   <---------ALFIN1                   <----------DOF2      --------- >ANAC58          <---------O2  --------->At4g35610           <---------ATHB12    <---------LBD16 >ANAC58     <---------ICU4<---------MYB46(3) --------->HSFB2a(2)     <---------DAG2 --------->At5g28300   ccgcggttttcttaagaatcacgtcggggcagttagcaccaaccgcttctgcaacttcttcccagtgattcgcctttagatttccacggttaagagcgta  18445400                                                                ------->GAMYB                                                                --------->DEAR3(1)                                                               <------------AtMYB77                                                               --------->DEAR3(2)                                                      <---------ANAC46                           <---                                                      <---------DEAR3(1)                         ----                                                     <---------LBD16                            <----                                                   --------->ANAC58                            <-----                                                   --------->ANAC46                            <-----    ---------->ID1                                 --------->ANAC58                     <------NtERF2 ---->SPL7                                         <---------DEAR3(1)                  <---------MYB46(3) --ANAC58                              <---------HSFB2a(2)   --------->ARR14(2)       --------->ALFIN1 --ANAC58         --------->WOX13(1)   --------->HSFB2a(2)   --------->MYB52(1)       <---------ANAC46 ------>AtSPL8 <-----------HVH21<---------CCA1(2)<---------ALFIN1             ----------->HVH21<----- -->ZAT18--------->ZAT14     <------ZmHOX2a(2)  <---------ZAT2 --------->MYB46(3)  --------->ALFIN1 ---SPL7 <---------SPL7  <---------ZAT18--------->LBD16 <------NtERF2    --------->ARR11(3) --------- ------>AtSPL3--------->ANAC46------>ZmHOX2a(2) --------->ZAT2<---------At5g28300  <---------DEAR3(1)   ccatttgtctctgtacgcgtcaattagcgcgatcgtctcttccagagaccagcacggcggaggtaaccgcctagagttcttggacgcggtggggatggag  18445500                                                                                               <-----         <------ZmHOX2a(2)                                                                     <-----         --------->CCA1(2)                                                                     ------        <---------AGP1                                                    --------->ALFIN1     ------        --------->AGP1                                                <------NtERF2           ------>ZmHOX2a(2)        --------->ARR14(2)            ------->TEIL                  <---------ANAC46          <------        <---------ARR14(2)         --------->ANAC46                 <---------ANAC58         <------ZmHOX2a(2)        <---------ARR11(3)      ----------->HVH21                   <---------ANAC58        ------->TEIL       <---------CCA1(2)      <-------GAMYB                        --------->ATERF1(1)      <-------- <----------DOF2             <------MYB46(1)                     <---------DEAR3(1)         --------- ---NtERF2------>ZmHOX2a(2)  <------MYB83                        --------->ALFIN1     --------->ALFIN1 ----->ATERF1(1)     --------->ZAT2--------->ANAC58           <-----------RAV1(1)---------->DOF2----- -----RAP2.3(1)      <---------ZAT2--------->ANAC58   <------ZmHOX2a(1) --------->ALFIN1 <---------WOX13(1) ----DEAR3(1)<-----------RAV1(1)--------->WRKY12--------->At4g35610<------NtERF2 --------->MYB52(1) ----RAP2.3(2)       --------->At4g35610 <-----------TGA1 --------->ARR11(3)  --------->At4g35610 ----RAP2.3(3)       <---------At4g35610 <-----------HVH21<---------ARR11(3)  <---------At4g35610 <-- >ALFIN1--------->ARR11(3)  --------->MYB59     <---------At4g35610<---------LBD16 --------->DAG2 ---   gcgctcttcagatctgtgttggaagctggttcggttgacgcatcgtcatgagcggaggaagataatggtggcgggaggggagctaaaggtgatggatccg  18445600      ------>ZmHOX2a(2)                                                      ------>ZmHOX2a(2)    <---------ARR14(2)         ----------->HVH21                           --------->ARR14(3) ----ANAC55(2)                ------>ZmHOX2a(2)                            --------->ARR11(3) ----HSFB2a(2)               <------ZmHOX2a(2)                             <---------AGP1 --->HSFB2a(2)              --------->ARR14(2)                             --------->AGP1 --->ANAC55(2)            --------->LBD16                                  <---------ARR14(2) ---LBD16<---------MYB46(3) <---------ARR14(2)        ------------------------>ANAC81 -ARR14(2)            <---------ARR14(2)              >>>>>>>>>TBF1        --------->ARR14(2) >ARR14(2)     <---------At4g35610             <------------CBF            <---------ARR11(3) ---->LBD16 <-------TEIL<---------LBD16      --------->AHL20(2)            <---------ARR14(3) -------ARR14(2)      --------->ARR14(2)     <---------AHL20(2)    ---------->DOF2 ------>ARR14(2)      --------->GLK1(2) <------ZmHOX2a(2)    ---------->DOF2<------ZmHOX2a(2)      <-   gaattggatcgtggttcatcggagaatccggatcggacatggatcaaaaaattgaagaagaaggaaagaaaaagacagatcttgtgaaggaagagaaatg  18445700                                 <---------ANAC55(2)                                 --------->ANAC58                          <---------MYB46(3)                        --------->ATERF1(1)                        <------NtERF2                       <---------ORA47(2)                       <---------RAP2.3(1)                       <---------DEAR4(2)                       <---------ATERF1(1)                       ------>NtERF2                                                            <----                       <---------ERF1                                                           <----                      --------->DEAR3(1)                                                        <----                      <---------ATERF1(2)                                                       <----                      <---------ANAC46                                                         ------                      --------->ATERF1(2)                                                  <------MYB83                      <---------RAP2.3(2)                                                  <---------ANAC58                      <---------RAP2.3(3)                                                  <---------ANAC58                      <---------DEAR3(1)                                                   --------->ALFIN1                     ------>NtERF2                                                        --------->MYB55(2)                     --------->RAP2.3(1)                                                  --------->MYB111(1)                     <------NtERF2                                                        <---------DEAR3(1)                     <---------ABI4(1)                                                    --------->MYB111(2)                     --------->ATERF1(1)                                                  <---------MYB46(3)                    <---------ATERF1(1)                                                  --------->ALFIN1                    <---------RAP2.3(1)            --------->DAG2                  <---------YAB1----                   <---------RAP2.3(2)          --------->ARR11(3)              <---------YAB1 <-----                   <---------RAP2.6(2)        ----------->ARR10              <---------SPL7<------MYB46(1)             <----------DOF2     --------->ANAC55(2)                        <---------ANAC58  <------             <---------DAG2<-------GAMYB  --------->HSFB2a(2)               <---------ANAC58 --------            <---------ANAC58     --------->ANAC55(1)                        <---------ANAC46 <-------            <---------ANAC58     --------->ANAC58 --------->MYB52(1)  <------ZmHOX2a(1)  <---------ANAC46  ---------->DOF2  <---------DEAR3(1)     <---------HSFB2a(2)    --------->ALFIN1--------->YAB1<----- ---------DOF2    <---------LBD16--------->ANAC46--------->CCA1(2)  <---------ANAC46<---------ICU4<--   gctgtaatgcgatggcttttcgcggcggcgattgcacgtaatatcgagaagataagggagagagagagtggaggagaggcgtatgataatggtgggtggc  18445800                                                                      <---------MYB46(3)                                                                      --------->MYB55(2)                                                                      <------MYB46(1)                                                                     <---------DEAR3(1)                                                                     --------->ALFIN1                                                                     <---------AtMYB61                                                                  --------->MYB55(2)                                                                  <---------MYB46(3)                                                                 <---------ANAC46                                                                <------NtERF2                     <--                                                                --------->ATERF1(1)               ---                                                               <---------SPL7                     <--                                                              <---------ANAC58                    ---                                                              <---------ANAC46                    <--      ----------->GT1                                         <---------ANAC58                    <--     --------->DAG2                                           <---------DEAR3(1)      <---------ANAC46     <---------TOE2(3)                                       <------NtERF2          <-----------HVH21     <---------TOE1(3)                                       <---------LBD16 <---------ZAT18      --- <------ZmHOX2a(1)                                         <---------DEAR3(1)<------NtERF2        --- -----ANAC58                                               --------->ALFIN1 ------>NtERF2        <--- -----DEAR3(1)                                            --------->ATERF1(1)--------->ZAT18     <--- -----ANAC58                                             --------->ABI4(2)  <-----------TCP11(1) <--- -----ANAC46                                             <---------MYB46(3)<---------RAP2.3(3)   ---- --->ATERF1(1)                                          <---------DEAR3(1)<------NtERF2          ---- ----->LBD16                                            --------->ALFIN1<---------ANAC46    --------- ----LBD16                          <------MYB83        <---------AtMYB61<---------MYB46(3) --------- ---ATERF1(1)                       ----------->GT1   <---------ANAC46<------MYB83 --------->DEAR3(1) ->ALFIN1                   --------->At4g35610      <---------DEAR3(1) --------->ALFIN1    --------- --DEAR3(1)           ----------->ARR10   ---------->DOF2--------->MYB55(2)<---------PCF2   --------- -NtERF2           <---------ANAC46 <------MYB46(1) <---------LBD16  --------->MYB111(2)   --------->SPL7 ----NtERF2  --------->CCA1(2)    <--------P   <---------DAG2--------->ATERF1(1)<---------ALFIN1 <---   ggaggataaggttagatagaagcgtagattagcagagttggtaataaagccttatgcggtggtggcggagggtggtgggggcacaccgtcgtggacgaca  18445900       --------->ICU4     --------->YAB1    --------->ICU4 -----MYC2                                                        --------->ANAC58               <--- ---->PIF5                                                        --------->ANAC46               <--- -----MYC3                                                        --------->ANAC58               ---- ---->MYC4                                                        ------>MYB46(1)                ==== -----MYC4                                                        ------>MYB83                   ==== -----PIF5                                                      <---------ALFIN1        <------MYB46(1) ---->MYC3                                                      --------->AtMYB61      --------->MYB111(2) ---->MYC2                                                --------->ANAC58            =============== ------ANAC46       --------->ARR14(2)                    --------->ANAC58          <---------MYB46(3) ------ANAC55(2)    <---------ARR14(2)            <---------At4g35610            --------->YAB1  <--- ------O2    <---------YAB1                       --------->At4g35610  <------NtERF2--------->ATHB12 ----->O2  --------->YAB1                       <---------RAP2.6(2) --------->MYB46(3)<--------P ==== ----->TGA1a<---------ARR11(3)               --------->DAG2   ------>NtERF2      <---------ICU4  <--- >ANAC58<---------ICU4                ----------->GT1  <---------REM1(1)        --------->ICU4   <--- >ANAC46-------->HAHB4           --------->AHL20(1)  --------->At4g35610      --------->YAB1   <----- -->HVH21 <---------YAB1         --------->AHL20(2)  <---------At4g35610 --------->ZAT14<------MYB83 >ANAC58--------->YAB1------>ZmHOX2a(2)     ---------->DOF2  --------->RAP2.6(2)<---------YAB1 ------ ------TGA1a--------->ARR11(3)   <---------AHL20(2) <---------MYB46(3)------>NtERF2<---------YAB1----   cgtggaataataatgatatttggatcggtgtgaaataaaatagagaaaaagcggctgatgaagccaccaagccaccgtagtcatcatggttggaggctaa  18446000                                    --------->ZAT18                                 <------MYB46(1)                                 <---------MYB46(3)                                 <------MYB83                             <---------ANAC58                             <---------ANAC46                          <---------DEAR3(1)                          --------->ALFIN1                        <------MYB83<---------ZAT18                        <------MYB46(1)                       --------->MYB111(2)                       --------->MYB111(1)    <---------ANAC55(1)<---------MYB46(3)    <---------ANAC46   --------->MYB52(2)    <---------ANAC58   --------->MYB55(2)    <---------ANAC58   --------->MYB46(2) ------ANAC58          <---------AtMYB61                                                 <---------ANAC58 ------ANAC58         <--------P<---------DEAR3(1)                        <---------AHL20(2) ----->TGA1a          <---------MYB55(1)                                  --------->AHL20(2) ==============================MYC_MYB                       <----------DOF2 --------->ICU4 =====================================MYC_MYB               <---------MYB52(1)--------->YAB1 ======MYC_MYB       <---------MYB52(1)                    <---------RAP2.6(3)<---------ICU4 <------- ------TGA1a        ------------>AtMYB15                 ----------------->AGL1          <---------ANAC58 ================================MYC_MYB                 ---------->ID1  <---------WOX13(1)<------NtERF2 ------ANAC46   <---------PCF5<-------GAMYB              ============================================ ------O2    --------->ANAC46<---------ANAC58            <-----------------AGL2          <---------ANAC46 ----DOF5.7(2) ----------->HVH21--------->ALFIN1--------->MYB46(3)  <---------At4g35610  <---------RAP2.6(2) --->MYB52(1)--------->ANAC55(2)<---------AtMYB61        <-----------------AGL3 <---------YAB1 ----->O2   <---------LBD16 <------NtERF2     --------->MYB52(1)<-----------RAV1(1)     ---------->ID1   cgtgagccgtgttatacgggaccggtaggtggcgttggtggacttagcgaaccgctcttgccgtttttggggctgattaattatgtttttggcgtctttc  18446100  Previous    Next  AGI:  At2g44730.1    Description:  transcription factor. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G24860.1); similar to MADF; Homeodomain-like [Medicago truncatula] (GB:ABN05928.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain MADF (InterPro:IPR006578) Range:  from: 18444408    to: 18445640    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g44735.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G18720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15899.1) Range:  from: 18445698    to: 18447126    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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